| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS16975 | | shikimate 5-dehydrogenase | 1.0 | BPHYT_RS33865 | | tryptophan synthase alpha chain | 0.72 | 19 |
| Paraburkholderia graminis OAS925 | 0.93 | ABIE53_003560 | | shikimate dehydrogenase | 0.97 | ABIE53_004811 | | tryptophan synthase alpha chain | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.90 | H281DRAFT_06291 | | shikimate dehydrogenase (EC 1.1.1.25) | 0.93 | H281DRAFT_06065 | | tryptophan synthase, alpha chain | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.81 | QEN71_RS27130 | | shikimate dehydrogenase | 0.86 | QEN71_RS17655 | | tryptophan synthase subunit alpha | 0.84 | 2 |
| Ralstonia solanacearum PSI07 | 0.55 | RPSI07_RS11300 | | shikimate dehydrogenase | 0.72 | RPSI07_RS14740 | | tryptophan synthase subunit alpha | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.54 | RALBFv3_RS05945 | | shikimate dehydrogenase | 0.71 | RALBFv3_RS02575 | | tryptophan synthase subunit alpha | — | — |
| Ralstonia solanacearum UW163 | 0.54 | UW163_RS07680 | | shikimate dehydrogenase | 0.71 | UW163_RS11150 | | tryptophan synthase subunit alpha | — | — |
| Ralstonia solanacearum GMI1000 | 0.54 | RS_RS13890 | | shikimate dehydrogenase | 0.72 | RS_RS09955 | | tryptophan synthase subunit alpha | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.54 | ABZR87_RS01605 | | shikimate dehydrogenase | 0.72 | ABZR87_RS14490 | | tryptophan synthase subunit alpha | 0.62 | 24 |
| Herbaspirillum seropedicae SmR1 | 0.51 | HSERO_RS01990 | | shikimate 5-dehydrogenase | 0.62 | HSERO_RS16470 | | tryptophan synthase subunit alpha | 0.60 | 41 |
| Cupriavidus basilensis FW507-4G11 | 0.51 | RR42_RS17645 | | shikimate dehydrogenase | 0.73 | RR42_RS14350 | | tryptophan synthase alpha chain | — | — |
| Pseudomonas sp. S08-1 | 0.47 | OH686_12485 | | Shikimate 5-dehydrogenase I alpha | 0.39 | OH686_12430 | | tryptophan synthase, alpha subunit | 0.86 | 1 |
| Pseudomonas putida KT2440 | 0.47 | PP_0074 | | shikimate 5-dehydrogenase | 0.42 | PP_0082 | | tryptophan synthase alpha chain | — | — |
| Shewanella sp. ANA-3 | 0.47 | Shewana3_0043 | aroE | shikimate 5-dehydrogenase (RefSeq) | 0.29 | Shewana3_1515 | trpA | tryptophan synthase subunit alpha (RefSeq) | 0.93 | 16 |
| Pseudomonas syringae pv. syringae B728a | 0.46 | Psyr_0025 | | shikimate dehydrogenase | 0.42 | Psyr_0033 | | tryptophan synthase, alpha chain | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.46 | Psyr_0025 | | shikimate dehydrogenase | 0.42 | Psyr_0033 | | tryptophan synthase, alpha chain | 0.71 | 5 |
| Pseudomonas sp. RS175 | 0.46 | PFR28_04655 | | Shikimate dehydrogenase (NADP(+)) | 0.40 | PFR28_04716 | | Tryptophan synthase alpha chain | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.45 | AO356_11315 | | shikimate dehydrogenase | 0.39 | AO356_10910 | | tryptophan synthase subunit alpha | 0.57 | 5 |
| Pseudomonas simiae WCS417 | 0.45 | PS417_00125 | | shikimate dehydrogenase | 0.39 | PS417_00180 | | tryptophan synthase subunit alpha | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.45 | Pf1N1B4_1906 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.40 | Pf1N1B4_1830 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | 0.58 | 13 |
| Pseudomonas fluorescens SBW25-INTG | 0.45 | PFLU_RS00120 | | shikimate dehydrogenase | 0.40 | PFLU_RS00175 | | tryptophan synthase subunit alpha | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.45 | Pf6N2E2_4130 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.40 | Pf6N2E2_4047 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | — | — |
| Pseudomonas fluorescens SBW25 | 0.45 | PFLU_RS00120 | | shikimate dehydrogenase | 0.40 | PFLU_RS00175 | | tryptophan synthase subunit alpha | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.45 | CSW01_00280 | | shikimate dehydrogenase | 0.29 | CSW01_05925 | | tryptophan synthase subunit alpha | low | > 62 |
| Marinobacter adhaerens HP15 | 0.45 | HP15_3750 | | shikimate dehydrogenase | 0.57 | HP15_1826 | | tryptophan synthase, alpha subunit | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.45 | PfGW456L13_644 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.39 | PfGW456L13_565 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | 0.67 | 60 |
| Castellaniella sp019104865 MT123 | 0.44 | ABCV34_RS11630 | | shikimate dehydrogenase | 0.54 | ABCV34_RS08430 | | tryptophan synthase subunit alpha | — | — |
| Pseudomonas stutzeri RCH2 | 0.44 | Psest_0029 | | shikimate 5-dehydrogenase | 0.41 | Psest_0062 | | tryptophan synthase, alpha subunit | — | — |
| Shewanella oneidensis MR-1 | 0.44 | SO0040 | aroE | shikimate 5-dehydrogenase (NCBI ptt file) | 0.29 | SO3024 | trpA | tryptophan synthase, alpha subunit (NCBI ptt file) | 0.90 | 10 |
| Pseudomonas fluorescens FW300-N2E3 | 0.44 | AO353_10670 | | shikimate dehydrogenase | 0.40 | AO353_10705 | | tryptophan synthase subunit alpha | 0.70 | 32 |
| Shewanella amazonensis SB2B | 0.41 | Sama_0052 | | shikimate dehydrogenase (RefSeq) | 0.29 | Sama_2134 | trpA | tryptophan synthase subunit alpha (RefSeq) | 0.76 | 5 |
| Pantoea sp. MT58 | 0.40 | IAI47_02315 | | shikimate dehydrogenase | 0.29 | IAI47_09165 | | tryptophan synthase subunit alpha | — | — |
| Shewanella loihica PV-4 | 0.40 | Shew_3727 | | shikimate 5-dehydrogenase (RefSeq) | 0.27 | Shew_2256 | trpA | tryptophan synthase subunit alpha (RefSeq) | 0.86 | 7 |
| Escherichia coli BW25113 | 0.39 | b3281 | aroE | dehydroshikimate reductase, NAD(P)-binding (NCBI) | 0.28 | b1260 | trpA | tryptophan synthase subunit alpha (NCBI) | 0.93 | 14 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.39 | OHPLBJKB_00422 | | Shikimate dehydrogenase (NADP(+)) | 0.28 | OHPLBJKB_02423 | | Tryptophan synthase alpha chain | low | > 73 |
| Escherichia coli BL21 | 0.39 | ECD_03132 | | dehydroshikimate reductase, NAD(P)-binding | 0.28 | ECD_01234 | | tryptophan synthase, alpha subunit | 0.58 | 31 |
| Escherichia coli ECOR27 | 0.39 | NOLOHH_09355 | aroE | shikimate dehydrogenase | 0.28 | NOLOHH_20335 | trpA | tryptophan synthase subunit alpha | 0.93 | 3 |
| Escherichia coli ECRC62 | 0.39 | BNILDI_02165 | aroE | shikimate dehydrogenase | 0.28 | BNILDI_18480 | trpA | tryptophan synthase subunit alpha | 0.98 | 1 |
| Escherichia coli ECOR38 | 0.39 | HEPCGN_16385 | aroE | shikimate dehydrogenase | 0.27 | HEPCGN_25515 | trpA | tryptophan synthase subunit alpha | 0.76 | 68 |
| Escherichia coli ECRC100 | 0.38 | OKFHMN_17565 | aroE | shikimate dehydrogenase | 0.28 | OKFHMN_02675 | trpA | tryptophan synthase subunit alpha | 0.87 | 73 |
| Escherichia coli ECRC101 | 0.38 | MCAODC_08085 | aroE | shikimate dehydrogenase | 0.28 | MCAODC_15590 | trpA | tryptophan synthase subunit alpha | 0.84 | 22 |
| Escherichia coli ECRC99 | 0.38 | KEDOAH_10585 | aroE | shikimate dehydrogenase | 0.28 | KEDOAH_26075 | trpA | tryptophan synthase subunit alpha | — | — |
| Escherichia coli ECRC102 | 0.38 | NIAGMN_15325 | aroE | shikimate dehydrogenase | 0.28 | NIAGMN_26845 | trpA | tryptophan synthase subunit alpha | — | — |
| Escherichia coli ECRC98 | 0.38 | JDDGAC_21185 | aroE | shikimate dehydrogenase | 0.28 | JDDGAC_05220 | trpA | tryptophan synthase subunit alpha | 0.83 | 26 |
| Escherichia coli Nissle 1917 | 0.38 | ECOLIN_RS18840 | | shikimate dehydrogenase | 0.28 | ECOLIN_RS07595 | | tryptophan synthase subunit alpha | — | — |
| Acidovorax sp. GW101-3H11 | 0.38 | Ac3H11_4044 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.58 | Ac3H11_1535 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | 0.96 | 5 |
| Escherichia fergusonii Becca | 0.38 | EFB2_00542 | | Shikimate dehydrogenase (NADP(+)) | 0.27 | EFB2_02666 | | Tryptophan synthase alpha chain | low | > 86 |
| Enterobacter asburiae PDN3 | 0.37 | EX28DRAFT_0046 | | shikimate dehydrogenase | 0.29 | EX28DRAFT_0932 | | tryptophan synthase, alpha chain (EC 4.2.1.20) | 0.64 | 7 |
| Serratia liquefaciens MT49 | 0.37 | IAI46_23240 | | shikimate dehydrogenase | 0.30 | IAI46_14045 | | tryptophan synthase subunit alpha | 0.56 | 71 |
| Erwinia tracheiphila SCR3 | 0.37 | LU632_RS22445 | aroE | shikimate dehydrogenase | 0.27 | LU632_RS12775 | trpA | tryptophan synthase subunit alpha | low | > 74 |
| Klebsiella michiganensis M5al | 0.36 | BWI76_RS25645 | | shikimate dehydrogenase | 0.29 | BWI76_RS11840 | | tryptophan synthase subunit alpha | 0.76 | 34 |
| Enterobacter sp. TBS_079 | 0.36 | MPMX20_04189 | | Shikimate dehydrogenase (NADP(+)) | 0.29 | MPMX20_02514 | | Tryptophan synthase alpha chain | 0.81 | 56 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.36 | GFF2397 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.30 | GFF2726 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | low | > 78 |
| Variovorax sp. SCN45 | 0.35 | GFF4456 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.59 | GFF3882 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | — | — |
| Acinetobacter radioresistens SK82 | 0.35 | MPMX26_02748 | | Shikimate dehydrogenase (NADP(+)) | 0.49 | MPMX26_02611 | | Tryptophan synthase alpha chain | — | — |
| Dickeya dianthicola ME23 | 0.35 | DZA65_RS20315 | | shikimate dehydrogenase | 0.31 | DZA65_RS10940 | | tryptophan synthase subunit alpha | — | — |
| Alteromonas macleodii MIT1002 | 0.35 | MIT1002_00029 | | Shikimate dehydrogenase | 0.28 | MIT1002_01425 | | Tryptophan synthase alpha chain | — | — |
| Dickeya dadantii 3937 | 0.35 | DDA3937_RS19100 | | shikimate dehydrogenase | 0.31 | DDA3937_RS10460 | | tryptophan synthase subunit alpha | — | — |
| Dickeya dianthicola 67-19 | 0.35 | HGI48_RS19190 | | shikimate dehydrogenase | 0.31 | HGI48_RS10460 | | tryptophan synthase subunit alpha | — | — |
| Variovorax sp. OAS795 | 0.34 | ABID97_RS06300 | | shikimate dehydrogenase | 0.58 | ABID97_RS08425 | | tryptophan synthase subunit alpha | — | — |
| Pectobacterium carotovorum WPP14 | 0.33 | HER17_RS02250 | | shikimate dehydrogenase | 0.31 | HER17_RS10940 | | tryptophan synthase subunit alpha | 0.93 | 23 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.30 | Xcc-8004.5020.1 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.41 | Xcc-8004.1967.1 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | 0.92 | 3 |
| Lysobacter sp. OAE881 | 0.29 | ABIE51_RS01815 | | shikimate dehydrogenase | 0.46 | ABIE51_RS08265 | | tryptophan synthase subunit alpha | 0.76 | 7 |
| Kangiella aquimarina DSM 16071 | 0.28 | B158DRAFT_0259 | | shikimate 5-dehydrogenase | 0.24 | B158DRAFT_2430 | | tryptophan synthase, alpha chain (EC 4.2.1.20) | 0.71 | 12 |
| Methanococcus maripaludis S2 | 0.21 | MMP_RS04855 | | shikimate dehydrogenase | 0.28 | MMP_RS05185 | | tryptophan synthase subunit alpha | — | — |
| Methanococcus maripaludis JJ | 0.21 | MMJJ_RS00280 | | shikimate dehydrogenase | 0.28 | MMJJ_RS09195 | | tryptophan synthase subunit alpha | — | — |
| Rhodopseudomonas palustris CGA009 | 0.21 | TX73_022410 | | shikimate dehydrogenase | 0.38 | TX73_000365 | | tryptophan synthase subunit alpha | — | — |
| Sinorhizobium meliloti 1021 | 0.20 | SMc02791 | | shikimate 5-dehydrogenase | 0.38 | SMc02765 | | tryptophan synthase subunit alpha | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.20 | DVU0115 | aroE | shikimate 5-dehydrogenase (TIGR) | 0.29 | DVU0471 | trpA | tryptophan synthase, alpha subunit (TIGR) | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.20 | DvMF_1962 | | shikimate 5-dehydrogenase (RefSeq) | 0.30 | DvMF_1740 | trpA | tryptophan synthase subunit alpha (RefSeq) | — | — |
| Synechococcus elongatus PCC 7942 | 0.20 | Synpcc7942_2467 | aroE | shikimate 5-dehydrogenase | 0.38 | Synpcc7942_0411 | trpA | tryptophan synthase subunit alpha | — | — |
| Phaeobacter inhibens DSM 17395 | 0.19 | PGA1_c35150 | | shikimate dehydrogenase AroE | 0.42 | PGA1_c04930 | | tryptophan synthase alpha chain | — | — |
| Rhodospirillum rubrum S1H | 0.19 | Rru_A3613 | | Quinate/Shikimate 5-dehydrogenase (NCBI) | 0.39 | Rru_A3428 | | Tryptophan synthase (NCBI) | — | — |
| Rhizobium sp. OAE497 | 0.19 | ABIE40_RS19250 | | shikimate dehydrogenase | 0.37 | ABIE40_RS19340 | | tryptophan synthase subunit alpha | — | — |
| Azospirillum sp. SherDot2 | 0.19 | MPMX19_02560 | | Shikimate dehydrogenase (NADP(+)) | 0.38 | MPMX19_02737 | | Tryptophan synthase alpha chain | — | — |
| Bosea sp. OAE506 | 0.18 | ABIE41_RS04650 | | shikimate dehydrogenase | 0.40 | ABIE41_RS03930 | | tryptophan synthase subunit alpha | — | — |
| Azospirillum brasilense Sp245 | 0.18 | AZOBR_RS01765 | | shikimate 5-dehydrogenase | 0.39 | AZOBR_RS00520 | | tryptophan synthase subunit alpha | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.17 | CCNA_00003 | | shikimate 5-dehydrogenase | 0.36 | CCNA_03657 | | tryptophan synthase alpha chain | low | > 67 |
| Caulobacter crescentus NA1000 | 0.17 | CCNA_00003 | | shikimate dehydrogenase (EC 1.1.1.25) (from data) | 0.36 | CCNA_03657 | | tryptophan synthase alpha chain | 0.93 | 10 |
| Parabacteroides merdae CL09T00C40 | 0.15 | HMPREF1078_RS14200 | | shikimate dehydrogenase | 0.28 | HMPREF1078_RS00120 | | tryptophan synthase subunit alpha | 0.92 | 31 |
| Bacteroides stercoris CC31F | 0.15 | HMPREF1181_RS06320 | | shikimate dehydrogenase | 0.27 | HMPREF1181_RS15350 | | tryptophan synthase subunit alpha | 0.77 | 45 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.15 | ABZR88_RS20055 | | shikimate dehydrogenase | 0.29 | ABZR88_RS10660 | | tryptophan synthase subunit alpha | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.14 | HMPREF1058_RS16750 | | shikimate dehydrogenase | 0.26 | HMPREF1058_RS07200 | | tryptophan synthase subunit alpha | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.14 | ABI39_RS12665 | | shikimate dehydrogenase | 0.26 | ABI39_RS21075 | | tryptophan synthase subunit alpha | 0.78 | 35 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.14 | Echvi_1145 | | Shikimate 5-dehydrogenase | 0.30 | Echvi_2511 | | tryptophan synthase, alpha subunit | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.14 | CA264_19075 | | shikimate dehydrogenase | 0.27 | CA264_05085 | | tryptophan synthase subunit alpha | — | — |
| Magnetospirillum magneticum AMB-1 | 0.14 | AMB_RS23010 | | shikimate dehydrogenase | 0.40 | AMB_RS20300 | | tryptophan synthase subunit alpha | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.13 | CA265_RS19745 | | shikimate dehydrogenase (EC 1.1.1.25) (from data) | 0.30 | CA265_RS05025 | | tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data) | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.13 | BT4215 | | shikimate dehydrogenase (EC 1.1.1.25) (from data) | 0.28 | BT0527 | | tryptophan synthase alpha chain (NCBI ptt file) | — | — |
| Bacteroides ovatus ATCC 8483 | 0.13 | BACOVA_05065 | | putative shikimate dehydrogenase | 0.26 | BACOVA_03785 | | tryptophan synthase, alpha subunit | — | — |
| Mycobacterium tuberculosis H37Rv | 0.11 | Rv2552c | | Probable shikimate 5-dehydrogenase AroE (5-dehydroshikimate reductase) | 0.27 | Rv1613 | | Probable tryptophan synthase, alpha subunit TrpA | — | — |
Not shown: 0 genomes with orthologs for BPHYT_RS16975 only; 12 genomes with orthologs for BPHYT_RS33865 only