Conservation of cofitness between BPHYT_RS16835 and BPHYT_RS09500 in Burkholderia phytofirmans PsJN

90 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16835 glyceraldehyde-3-phosphate dehydrogenase 1.0 BPHYT_RS09500 glucose-6-phosphate isomerase 0.81 11
Paraburkholderia graminis OAS925 0.99 ABIE53_003536 glyceraldehyde 3-phosphate dehydrogenase 0.91 ABIE53_002138 glucose-6-phosphate isomerase 0.52 28
Paraburkholderia bryophila 376MFSha3.1 0.99 H281DRAFT_06315 glyceraldehyde-3-phosphate dehydrogenase (NAD+) 0.92 H281DRAFT_00906 glucose-6-phosphate isomerase
Paraburkholderia sabiae LMG 24235 0.96 QEN71_RS27005 type I glyceraldehyde-3-phosphate dehydrogenase 0.88 QEN71_RS21935 glucose-6-phosphate isomerase 0.53 27
Herbaspirillum seropedicae SmR1 0.89 HSERO_RS07125 glyceraldehyde-3-phosphate dehydrogenase 0.51 HSERO_RS05515 glucose-6-phosphate isomerase
Castellaniella sp019104865 MT123 0.87 ABCV34_RS15455 type I glyceraldehyde-3-phosphate dehydrogenase 0.33 ABCV34_RS11120 glucose-6-phosphate isomerase
Dyella japonica UNC79MFTsu3.2 0.76 ABZR86_RS18615 type I glyceraldehyde-3-phosphate dehydrogenase 0.40 ABZR86_RS00830 glucose-6-phosphate isomerase low > 74
Shewanella sp. ANA-3 0.72 Shewana3_2124 glyceraldehyde-3-phosphate dehydrogenase (RefSeq) 0.48 Shewana3_3148 pgi glucose-6-phosphate isomerase (RefSeq)
Shewanella loihica PV-4 0.71 Shew_2002 glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq) 0.46 Shew_1088 pgi glucose-6-phosphate isomerase (RefSeq)
Shewanella oneidensis MR-1 0.71 SO2345 gapA-2 glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file) 0.47 SO3547 pgi glucose-6-phosphate isomerase (NCBI ptt file)
Shewanella amazonensis SB2B 0.71 Sama_1808 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (RefSeq) 0.48 Sama_0912 pgi glucose-6-phosphate isomerase (RefSeq)
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_1108 glyceraldehyde-3-phosphate dehydrogenase 0.44 Psyr_0826 glucose-6-phosphate isomerase low > 86
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_1108 glyceraldehyde-3-phosphate dehydrogenase 0.44 Psyr_0826 glucose-6-phosphate isomerase 0.47 45
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS24335 type I glyceraldehyde-3-phosphate dehydrogenase 0.45 PFLU_RS25760 glucose-6-phosphate isomerase 0.33 25
Pseudomonas fluorescens SBW25 0.66 PFLU_RS24335 type I glyceraldehyde-3-phosphate dehydrogenase 0.45 PFLU_RS25760 glucose-6-phosphate isomerase 0.73 24
Pseudomonas simiae WCS417 0.66 PS417_22695 glyceraldehyde-3-phosphate dehydrogenase 0.45 PS417_23920 glucose-6-phosphate isomerase
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_602 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.45 Pf1N1B4_2850 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.56 4
Marinobacter adhaerens HP15 0.65 HP15_2175 glyceraldehyde-3-phosphate dehydrogenase, type I 0.45 HP15_322 glucose-6-phosphate isomerase
Pseudomonas sp. RS175 0.65 PFR28_00560 Glyceraldehyde-3-phosphate dehydrogenase 1 0.44 PFR28_03724 Glucose-6-phosphate isomerase 0.30 40
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_03425 glyceraldehyde-3-phosphate dehydrogenase 0.45 AO353_14370 glucose-6-phosphate isomerase low > 101
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_1888 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.45 PfGW456L13_1518 Glucose-6-phosphate isomerase (EC 5.3.1.9)
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_2899 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.44 Pf6N2E2_5150 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.54 13
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_05225 glyceraldehyde-3-phosphate dehydrogenase 0.44 AO356_16050 glucose-6-phosphate isomerase 0.50 12
Sinorhizobium meliloti 1021 0.62 SMc03979 glyceraldehyde-3-phosphate dehydrogenase 0.42 SMc02163 glucose-6-phosphate isomerase
Pseudomonas putida KT2440 0.62 PP_1009 glyceraldehyde-3-phosphate dehydrogenase 0.45 PP_4701 glucose-6-phosphate isomerase low > 96
Agrobacterium fabrum C58 0.61 Atu3737 glyceraldehyde 3-phosphate dehydrogenase 0.42 Atu0404 glucose-6-phosphate isomerase
Rhodospirillum rubrum S1H 0.61 Rru_A0222 Glyceraldehyde-3-phosphate dehydrogenase, type I (NCBI) 0.47 Rru_A2947 Glucose-6-phosphate isomerase (NCBI)
Sphingomonas koreensis DSMZ 15582 0.60 Ga0059261_0730 glyceraldehyde-3-phosphate dehydrogenase, type I 0.31 Ga0059261_1948 Glucose-6-phosphate isomerase
Rhizobium sp. OAE497 0.60 ABIE40_RS15870 type I glyceraldehyde-3-phosphate dehydrogenase 0.43 ABIE40_RS02150 glucose-6-phosphate isomerase
Azospirillum brasilense Sp245 0.59 AZOBR_RS10375 glyceraldehyde-3-phosphate dehydrogenase 0.51 AZOBR_RS05045 glucose-6-phosphate isomerase
Dinoroseobacter shibae DFL-12 0.59 Dshi_1742 glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq) 0.42 Dshi_1682 Glucose-6-phosphate isomerase (RefSeq)
Azospirillum sp. SherDot2 0.59 MPMX19_02850 Glyceraldehyde-3-phosphate dehydrogenase 1 0.51 MPMX19_00519 Glucose-6-phosphate isomerase
Dechlorosoma suillum PS 0.58 Dsui_1560 glyceraldehyde-3-phosphate dehydrogenase, type I 0.48 Dsui_1239 glucose-6-phosphate isomerase
Bosea sp. OAE506 0.58 ABIE41_RS09420 type I glyceraldehyde-3-phosphate dehydrogenase 0.43 ABIE41_RS07535 glucose-6-phosphate isomerase
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS10040 type I glyceraldehyde-3-phosphate dehydrogenase 0.39 A4249_RS14585 glucose-6-phosphate isomerase
Phaeobacter inhibens DSM 17395 0.56 PGA1_c27490 glyceraldehyde-3-phosphate dehydrogenase Gap 0.41 PGA1_c27980 glucose-6-phosphate isomerase Pgi
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_03358 glyceraldehyde 3-phosphate dehydrogenase 0.37 CCNA_00222 glucose-6-phosphate isomerase/glucose-6 phosphate 1-epimerase
Caulobacter crescentus NA1000 0.56 CCNA_03358 glyceraldehyde 3-phosphate dehydrogenase 0.37 CCNA_00222 glucose-6-phosphate isomerase/glucose-6 phosphate 1-epimerase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF3022 D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) 0.47 GFF1396 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.79 5
Escherichia coli BL21 0.55 ECD_02758 D-erythrose 4-phosphate dehydrogenase 0.47 ECD_03897 glucosephosphate isomerase low > 61
Escherichia coli ECRC102 0.55 NIAGMN_17150 epd erythrose-4-phosphate dehydrogenase 0.47 NIAGMN_10925 pgi glucose-6-phosphate isomerase
Escherichia coli ECRC62 0.55 BNILDI_09835 epd erythrose-4-phosphate dehydrogenase 0.47 BNILDI_06185 pgi glucose-6-phosphate isomerase low > 75
Escherichia coli ECRC99 0.55 KEDOAH_08755 epd erythrose-4-phosphate dehydrogenase 0.47 KEDOAH_14985 pgi glucose-6-phosphate isomerase
Escherichia coli Nissle 1917 0.55 ECOLIN_RS16265 erythrose-4-phosphate dehydrogenase 0.47 ECOLIN_RS23240 glucose-6-phosphate isomerase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_00789 D-erythrose-4-phosphate dehydrogenase 0.47 OHPLBJKB_04021 Glucose-6-phosphate isomerase low > 73
Escherichia coli BW25113 0.55 b2927 epd D-erythrose 4-phosphate dehydrogenase (NCBI) 0.47 b4025 pgi glucose-6-phosphate isomerase (NCBI) low > 76
Escherichia coli ECRC100 0.55 OKFHMN_19385 epd erythrose-4-phosphate dehydrogenase 0.47 OKFHMN_13175 pgi glucose-6-phosphate isomerase low > 80
Escherichia coli ECRC101 0.55 MCAODC_09905 epd erythrose-4-phosphate dehydrogenase 0.47 MCAODC_03675 pgi glucose-6-phosphate isomerase low > 87
Escherichia coli ECRC98 0.55 JDDGAC_23015 epd erythrose-4-phosphate dehydrogenase 0.47 JDDGAC_16800 pgi glucose-6-phosphate isomerase low > 86
Escherichia coli ECOR27 0.55 NOLOHH_11295 epd erythrose-4-phosphate dehydrogenase 0.47 NOLOHH_05335 pgi glucose-6-phosphate isomerase low > 75
Pantoea sp. MT58 0.55 IAI47_03685 erythrose-4-phosphate dehydrogenase 0.46 IAI47_17965 glucose-6-phosphate isomerase low > 76
Escherichia fergusonii Becca 0.54 EFB2_00979 D-erythrose-4-phosphate dehydrogenase 0.47 EFB2_04577 Glucose-6-phosphate isomerase low > 86
Escherichia coli ECOR38 0.54 HEPCGN_18695 epd erythrose-4-phosphate dehydrogenase 0.47 HEPCGN_11685 pgi glucose-6-phosphate isomerase low > 87
Klebsiella michiganensis M5al 0.54 BWI76_RS23985 erythrose-4-phosphate dehydrogenase 0.47 BWI76_RS01800 glucose-6-phosphate isomerase low > 92
Enterobacter asburiae PDN3 0.53 EX28DRAFT_2973 erythrose-4-phosphate dehydrogenase 0.46 EX28DRAFT_4318 Glucose-6-phosphate isomerase low > 76
Pseudomonas stutzeri RCH2 0.53 Psest_3784 glyceraldehyde-3-phosphate dehydrogenase, type I 0.45 Psest_0993 Glucose-6-phosphate isomerase low > 67
Enterobacter sp. TBS_079 0.53 MPMX20_03779 D-erythrose-4-phosphate dehydrogenase 0.47 MPMX20_00241 Glucose-6-phosphate isomerase low > 85
Serratia liquefaciens MT49 0.53 IAI46_21015 erythrose-4-phosphate dehydrogenase 0.47 IAI46_23090 glucose-6-phosphate isomerase low > 86
Rahnella sp. WP5 0.52 EX31_RS21405 erythrose-4-phosphate dehydrogenase 0.46 EX31_RS11815 glucose-6-phosphate isomerase low > 89
Pectobacterium carotovorum WPP14 0.52 HER17_RS02685 erythrose-4-phosphate dehydrogenase 0.47 HER17_RS02340 glucose-6-phosphate isomerase 0.52 68
Pontibacter actiniarum KMM 6156, DSM 19842 0.52 CA264_03770 type I glyceraldehyde-3-phosphate dehydrogenase 0.50 CA264_07470 glucose-6-phosphate isomerase
Mycobacterium tuberculosis H37Rv 0.52 Rv1436 Probable glyceraldehyde 3-phosphate dehydrogenase Gap (GAPDH) 0.46 Rv0946c Probable glucose-6-phosphate isomerase Pgi (GPI) (phosphoglucose isomerase) (phosphohexose isomerase) (phi)
Erwinia tracheiphila SCR3 0.52 LU632_RS05535 epd erythrose-4-phosphate dehydrogenase 0.45 LU632_RS22365 pgi glucose-6-phosphate isomerase 0.65 36
Dickeya dadantii 3937 0.51 DDA3937_RS18520 erythrose-4-phosphate dehydrogenase 0.47 DDA3937_RS19015 glucose-6-phosphate isomerase low > 74
Dickeya dianthicola ME23 0.51 DZA65_RS19580 erythrose-4-phosphate dehydrogenase 0.46 DZA65_RS20220 glucose-6-phosphate isomerase low > 75
Dickeya dianthicola 67-19 0.51 HGI48_RS18445 erythrose-4-phosphate dehydrogenase 0.46 HGI48_RS19100 glucose-6-phosphate isomerase low > 71
Pseudomonas sp. S08-1 0.51 OH686_10765 erythrose-4-phosphate dehydrogenase 0.45 OH686_17230 Glucose-6-phosphate isomerase
Alteromonas macleodii MIT1002 0.51 MIT1002_00862 D-erythrose-4-phosphate dehydrogenase 0.49 MIT1002_03081 Glucose-6-phosphate isomerase
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_02530 D-erythrose-4-phosphate dehydrogenase 0.47 CSW01_01965 glucose-6-phosphate isomerase low > 62
Acinetobacter radioresistens SK82 0.50 MPMX26_01087 D-erythrose-4-phosphate dehydrogenase 0.37 MPMX26_00065 Glucose-6-phosphate isomerase low > 36
Variovorax sp. SCN45 0.49 GFF7175 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.42 GFF5267 Glucose-6-phosphate isomerase (EC 5.3.1.9)
Ralstonia solanacearum PSI07 0.49 RPSI07_RS11435 type I glyceraldehyde-3-phosphate dehydrogenase 0.54 RPSI07_RS16175 glucose-6-phosphate isomerase
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS05865 type I glyceraldehyde-3-phosphate dehydrogenase 0.53 RALBFv3_RS01300 glucose-6-phosphate isomerase
Desulfovibrio vulgaris Hildenborough JW710 0.49 DVU0565 gap-1 glyceraldehyde 3-phosphate dehydrogenase (TIGR) 0.07 DVU3222 pgi glucose-6-phosphate isomerase (TIGR)
Ralstonia solanacearum GMI1000 0.49 RS_RS13755 aldehyde dehydrogenase 0.53 RS_RS08695 glucose-6-phosphate isomerase
Ralstonia solanacearum UW163 0.49 UW163_RS07760 type I glyceraldehyde-3-phosphate dehydrogenase 0.53 UW163_RS14610 glucose-6-phosphate isomerase
Variovorax sp. OAS795 0.49 ABID97_RS02440 type I glyceraldehyde-3-phosphate dehydrogenase 0.41 ABID97_RS07100 glucose-6-phosphate isomerase
Rhodanobacter denitrificans MT42 0.49 LRK55_RS05540 type I glyceraldehyde-3-phosphate dehydrogenase 0.51 LRK55_RS08520 glucose-6-phosphate isomerase
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS05785 type I glyceraldehyde-3-phosphate dehydrogenase 0.51 LRK54_RS08755 glucose-6-phosphate isomerase
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS01435 type I glyceraldehyde-3-phosphate dehydrogenase 0.54 ABZR87_RS12745 glucose-6-phosphate isomerase
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS17570 glyceraldehyde-3-phosphate dehydrogenase 0.56 RR42_RS09060 glucose-6-phosphate isomerase
Pedobacter sp. GW460-11-11-14-LB5 0.48 CA265_RS01860 type I glyceraldehyde-3-phosphate dehydrogenase 0.47 CA265_RS17975 glucose-6-phosphate isomerase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.48 ABZR88_RS12470 type I glyceraldehyde-3-phosphate dehydrogenase 0.48 ABZR88_RS03585 glucose-6-phosphate isomerase
Lysobacter sp. OAE881 0.47 ABIE51_RS17095 type I glyceraldehyde-3-phosphate dehydrogenase 0.31 ABIE51_RS08040 glucose-6-phosphate isomerase low > 62
Echinicola vietnamensis KMM 6221, DSM 17526 0.47 Echvi_3029 glyceraldehyde-3-phosphate dehydrogenase, type I 0.47 Echvi_4036 Glucose-6-phosphate isomerase
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_01060 gap type I glyceraldehyde-3-phosphate dehydrogenase 0.51 OKGIIK_15520 pgi glucose-6-phosphate isomerase low > 52
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.1236.1 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.35 Xcc-8004.3049.1 Glucose-6-phosphate isomerase (EC 5.3.1.9) low > 74
Acidovorax sp. GW101-3H11 0.46 Ac3H11_648 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.43 Ac3H11_2077 Glucose-6-phosphate isomerase (EC 5.3.1.9)
Magnetospirillum magneticum AMB-1 0.44 AMB_RS02635 type I glyceraldehyde-3-phosphate dehydrogenase 0.48 AMB_RS22330 glucose-6-phosphate isomerase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF1114 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.39 GFF5497 Glucose-6-phosphate isomerase (EC 5.3.1.9) low > 90
Bifidobacterium breve UCC2003 0.38 BBR_RS16790 type I glyceraldehyde-3-phosphate dehydrogenase 0.44 BBR_RS12430 glucose-6-phosphate isomerase

Not shown: 11 genomes with orthologs for BPHYT_RS16835 only; 0 genomes with orthologs for BPHYT_RS09500 only