Conservation of cofitness between BPHYT_RS06405 and BPHYT_RS09500 in Burkholderia phytofirmans PsJN

90 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS06405 phosphoribosylamine--glycine ligase 1.0 BPHYT_RS09500 glucose-6-phosphate isomerase 0.84 10
Paraburkholderia graminis OAS925 0.98 ABIE53_001545 phosphoribosylamine--glycine ligase 0.91 ABIE53_002138 glucose-6-phosphate isomerase — —
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_04521 phosphoribosylamine--glycine ligase 0.92 H281DRAFT_00906 glucose-6-phosphate isomerase — —
Paraburkholderia sabiae LMG 24235 0.92 QEN71_RS24400 phosphoribosylamine--glycine ligase 0.88 QEN71_RS21935 glucose-6-phosphate isomerase low > 153
Herbaspirillum seropedicae SmR1 0.80 HSERO_RS17755 phosphoribosylamine--glycine ligase 0.51 HSERO_RS05515 glucose-6-phosphate isomerase — —
Ralstonia solanacearum GMI1000 0.78 RS_RS10995 phosphoribosylamine--glycine ligase 0.53 RS_RS08695 glucose-6-phosphate isomerase — —
Ralstonia sp. UNC404CL21Col 0.78 ABZR87_RS15410 phosphoribosylamine--glycine ligase 0.54 ABZR87_RS12745 glucose-6-phosphate isomerase — —
Ralstonia solanacearum PSI07 0.77 RPSI07_RS13680 phosphoribosylamine--glycine ligase 0.54 RPSI07_RS16175 glucose-6-phosphate isomerase — —
Ralstonia solanacearum IBSBF1503 0.76 RALBFv3_RS03545 phosphoribosylamine--glycine ligase 0.53 RALBFv3_RS01300 glucose-6-phosphate isomerase — —
Ralstonia solanacearum UW163 0.76 UW163_RS10125 phosphoribosylamine--glycine ligase 0.53 UW163_RS14610 glucose-6-phosphate isomerase — —
Cupriavidus basilensis FW507-4G11 0.74 RR42_RS04730 phosphoribosylamine--glycine ligase 0.56 RR42_RS09060 glucose-6-phosphate isomerase — —
Dechlorosoma suillum PS 0.73 Dsui_1596 phosphoribosylamine--glycine ligase 0.48 Dsui_1239 glucose-6-phosphate isomerase — —
Variovorax sp. SCN45 0.72 GFF302 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.42 GFF5267 Glucose-6-phosphate isomerase (EC 5.3.1.9) low > 127
Variovorax sp. OAS795 0.70 ABID97_RS16735 phosphoribosylamine--glycine ligase 0.41 ABID97_RS07100 glucose-6-phosphate isomerase — —
Acidovorax sp. GW101-3H11 0.68 Ac3H11_2421 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.43 Ac3H11_2077 Glucose-6-phosphate isomerase (EC 5.3.1.9) — —
Castellaniella sp019104865 MT123 0.68 ABCV34_RS02550 phosphoribosylamine--glycine ligase 0.33 ABCV34_RS11120 glucose-6-phosphate isomerase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF4524 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.39 GFF5497 Glucose-6-phosphate isomerase (EC 5.3.1.9) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_04044 Phosphoribosylamine--glycine ligase 0.47 OHPLBJKB_04021 Glucose-6-phosphate isomerase low > 73
Escherichia coli BL21 0.60 ECD_03882 phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase 0.47 ECD_03897 glucosephosphate isomerase low > 61
Escherichia coli Nissle 1917 0.60 ECOLIN_RS23095 phosphoribosylamine--glycine ligase 0.47 ECOLIN_RS23240 glucose-6-phosphate isomerase low > 55
Escherichia fergusonii Becca 0.60 EFB2_04605 Phosphoribosylamine--glycine ligase 0.47 EFB2_04577 Glucose-6-phosphate isomerase low > 86
Escherichia coli ECRC62 0.59 BNILDI_06060 purD Phosphoribosylamine--glycine ligase 0.47 BNILDI_06185 pgi glucose-6-phosphate isomerase low > 75
Pantoea sp. MT58 0.59 IAI47_18045 phosphoribosylamine--glycine ligase 0.46 IAI47_17965 glucose-6-phosphate isomerase low > 76
Escherichia coli ECOR27 0.59 NOLOHH_05460 purD Phosphoribosylamine--glycine ligase 0.47 NOLOHH_05335 pgi glucose-6-phosphate isomerase low > 75
Pseudomonas putida KT2440 0.59 PP_4823 Phosphoribosylamine--glycine ligase 0.45 PP_4701 glucose-6-phosphate isomerase — —
Escherichia coli ECRC98 0.59 JDDGAC_16940 purD Phosphoribosylamine--glycine ligase 0.47 JDDGAC_16800 pgi glucose-6-phosphate isomerase low > 86
Escherichia coli ECRC99 0.59 KEDOAH_14845 purD Phosphoribosylamine--glycine ligase 0.47 KEDOAH_14985 pgi glucose-6-phosphate isomerase — —
Escherichia coli ECRC100 0.59 OKFHMN_13315 purD Phosphoribosylamine--glycine ligase 0.47 OKFHMN_13175 pgi glucose-6-phosphate isomerase low > 80
Escherichia coli ECRC102 0.59 NIAGMN_11065 purD Phosphoribosylamine--glycine ligase 0.47 NIAGMN_10925 pgi glucose-6-phosphate isomerase — —
Escherichia coli ECOR38 0.59 HEPCGN_11955 purD Phosphoribosylamine--glycine ligase 0.47 HEPCGN_11685 pgi glucose-6-phosphate isomerase low > 87
Escherichia coli ECRC101 0.59 MCAODC_03815 purD Phosphoribosylamine--glycine ligase 0.47 MCAODC_03675 pgi glucose-6-phosphate isomerase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF4187 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.47 GFF1396 Glucose-6-phosphate isomerase (EC 5.3.1.9) low > 78
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_3520 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.44 Pf6N2E2_5150 Glucose-6-phosphate isomerase (EC 5.3.1.9) — —
Escherichia coli BW25113 0.59 b4005 purD phosphoribosylamine--glycine ligase (NCBI) 0.47 b4025 pgi glucose-6-phosphate isomerase (NCBI) low > 76
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_1316 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.45 Pf1N1B4_2850 Glucose-6-phosphate isomerase (EC 5.3.1.9) — —
Klebsiella michiganensis M5al 0.59 BWI76_RS01610 phosphoribosylamine--glycine ligase 0.47 BWI76_RS01800 glucose-6-phosphate isomerase low > 92
Pseudomonas sp. RS175 0.59 PFR28_05213 Phosphoribosylamine--glycine ligase 0.44 PFR28_03724 Glucose-6-phosphate isomerase — —
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_08230 phosphoribosylamine--glycine ligase 0.44 AO356_16050 glucose-6-phosphate isomerase — —
Enterobacter sp. TBS_079 0.58 MPMX20_00225 Phosphoribosylamine--glycine ligase 0.47 MPMX20_00241 Glucose-6-phosphate isomerase low > 85
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.45 PFLU_RS25760 glucose-6-phosphate isomerase — —
Pseudomonas fluorescens SBW25 0.58 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.45 PFLU_RS25760 glucose-6-phosphate isomerase — —
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_01415 phosphoribosylamine--glycine ligase 0.47 CSW01_01965 glucose-6-phosphate isomerase low > 62
Pseudomonas sp. S08-1 0.58 OH686_07625 Phosphoribosylamine--glycine ligase 0.45 OH686_17230 Glucose-6-phosphate isomerase — —
Acinetobacter radioresistens SK82 0.58 MPMX26_01140 Phosphoribosylamine--glycine ligase 0.37 MPMX26_00065 Glucose-6-phosphate isomerase low > 36
Erwinia tracheiphila SCR3 0.58 LU632_RS01015 purD phosphoribosylamine--glycine ligase 0.45 LU632_RS22365 pgi glucose-6-phosphate isomerase low > 74
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_58 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.45 PfGW456L13_1518 Glucose-6-phosphate isomerase (EC 5.3.1.9) — —
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_4407 phosphoribosylamine--glycine ligase 0.44 Psyr_0826 glucose-6-phosphate isomerase 0.52 79
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_4407 phosphoribosylamine--glycine ligase 0.44 Psyr_0826 glucose-6-phosphate isomerase — —
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_13645 phosphoribosylamine--glycine ligase 0.45 AO353_14370 glucose-6-phosphate isomerase — —
Enterobacter asburiae PDN3 0.58 EX28DRAFT_4544 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.46 EX28DRAFT_4318 Glucose-6-phosphate isomerase low > 76
Dickeya dadantii 3937 0.58 DDA3937_RS01215 phosphoribosylamine--glycine ligase 0.47 DDA3937_RS19015 glucose-6-phosphate isomerase low > 74
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.657.1 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.35 Xcc-8004.3049.1 Glucose-6-phosphate isomerase (EC 5.3.1.9) low > 74
Pseudomonas stutzeri RCH2 0.58 Psest_1013 phosphoribosylamine--glycine ligase 0.45 Psest_0993 Glucose-6-phosphate isomerase low > 67
Marinobacter adhaerens HP15 0.58 HP15_3228 phosphoribosylamine-glycine ligase 0.45 HP15_322 glucose-6-phosphate isomerase — —
Dickeya dianthicola ME23 0.57 DZA65_RS01255 phosphoribosylamine--glycine ligase 0.46 DZA65_RS20220 glucose-6-phosphate isomerase low > 75
Pseudomonas simiae WCS417 0.57 PS417_02935 phosphoribosylamine--glycine ligase 0.45 PS417_23920 glucose-6-phosphate isomerase — —
Dickeya dianthicola 67-19 0.57 HGI48_RS01210 phosphoribosylamine--glycine ligase 0.46 HGI48_RS19100 glucose-6-phosphate isomerase low > 71
Lysobacter sp. OAE881 0.57 ABIE51_RS17770 phosphoribosylamine--glycine ligase 0.31 ABIE51_RS08040 glucose-6-phosphate isomerase low > 62
Rahnella sp. WP5 0.57 EX31_RS16855 phosphoribosylamine--glycine ligase 0.46 EX31_RS11815 glucose-6-phosphate isomerase low > 89
Pectobacterium carotovorum WPP14 0.57 HER17_RS20340 phosphoribosylamine--glycine ligase 0.47 HER17_RS02340 glucose-6-phosphate isomerase low > 75
Alteromonas macleodii MIT1002 0.56 MIT1002_03961 Phosphoribosylamine--glycine ligase 0.49 MIT1002_03081 Glucose-6-phosphate isomerase — —
Serratia liquefaciens MT49 0.56 IAI46_01360 phosphoribosylamine--glycine ligase 0.47 IAI46_23090 glucose-6-phosphate isomerase low > 86
Shewanella amazonensis SB2B 0.56 Sama_0394 phosphoribosylamine--glycine ligase (RefSeq) 0.48 Sama_0912 pgi glucose-6-phosphate isomerase (RefSeq) — —
Shewanella sp. ANA-3 0.55 Shewana3_0440 phosphoribosylamine--glycine ligase (RefSeq) 0.48 Shewana3_3148 pgi glucose-6-phosphate isomerase (RefSeq) — —
Shewanella oneidensis MR-1 0.54 SO0441 purD phosphoribosylamine--glycine ligase (NCBI ptt file) 0.47 SO3547 pgi glucose-6-phosphate isomerase (NCBI ptt file) — —
Shewanella loihica PV-4 0.53 Shew_3413 phosphoribosylamine--glycine ligase (RefSeq) 0.46 Shew_1088 pgi glucose-6-phosphate isomerase (RefSeq) — —
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS13850 phosphoribosylamine--glycine ligase 0.40 ABZR86_RS00830 glucose-6-phosphate isomerase low > 74
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_13750 purD phosphoribosylamine--glycine ligase 0.51 OKGIIK_15520 pgi glucose-6-phosphate isomerase low > 52
Rhodanobacter denitrificans MT42 0.51 LRK55_RS09805 phosphoribosylamine--glycine ligase 0.51 LRK55_RS08520 glucose-6-phosphate isomerase — —
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS10165 phosphoribosylamine--glycine ligase 0.51 LRK54_RS08755 glucose-6-phosphate isomerase — —
Agrobacterium fabrum C58 0.48 Atu0647 phosphoribosylamine--glycine ligase 0.42 Atu0404 glucose-6-phosphate isomerase — —
Bosea sp. OAE506 0.47 ABIE41_RS23160 phosphoribosylamine--glycine ligase 0.43 ABIE41_RS07535 glucose-6-phosphate isomerase 0.46 46
Rhizobium sp. OAE497 0.47 ABIE40_RS05430 phosphoribosylamine--glycine ligase 0.43 ABIE40_RS02150 glucose-6-phosphate isomerase — —
Azospirillum sp. SherDot2 0.47 MPMX19_01630 Phosphoribosylamine--glycine ligase 0.51 MPMX19_00519 Glucose-6-phosphate isomerase — —
Azospirillum brasilense Sp245 0.46 AZOBR_RS04470 phosphoribosylamine--glycine ligase 0.51 AZOBR_RS05045 glucose-6-phosphate isomerase — —
Sinorhizobium meliloti 1021 0.45 SMc00993 phosphoribosylamine--glycine ligase 0.42 SMc02163 glucose-6-phosphate isomerase — —
Desulfovibrio vulgaris Hildenborough JW710 0.44 DVU0488 purD phosphoribosylamine--glycine ligase (TIGR) 0.07 DVU3222 pgi glucose-6-phosphate isomerase (TIGR) — —
Magnetospirillum magneticum AMB-1 0.44 AMB_RS01075 phosphoribosylamine--glycine ligase 0.48 AMB_RS22330 glucose-6-phosphate isomerase — —
Rhodospirillum rubrum S1H 0.43 Rru_A0646 Phosphoribosylamine--glycine ligase (NCBI) 0.47 Rru_A2947 Glucose-6-phosphate isomerase (NCBI) — —
Phaeobacter inhibens DSM 17395 0.43 PGA1_c23610 phosphoribosylamine--glycine ligase PurD 0.41 PGA1_c27980 glucose-6-phosphate isomerase Pgi — —
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_00299 phosphoribosylamine--glycine ligase 0.37 CCNA_00222 glucose-6-phosphate isomerase/glucose-6 phosphate 1-epimerase — —
Caulobacter crescentus NA1000 0.42 CCNA_00299 phosphoribosylamine--glycine ligase 0.37 CCNA_00222 glucose-6-phosphate isomerase/glucose-6 phosphate 1-epimerase — —
Dinoroseobacter shibae DFL-12 0.42 Dshi_2728 phosphoribosylamine--glycine ligase (RefSeq) 0.42 Dshi_1682 Glucose-6-phosphate isomerase (RefSeq) — —
Bifidobacterium breve UCC2003 0.41 BBR_RS13370 phosphoribosylamine--glycine ligase 0.44 BBR_RS12430 glucose-6-phosphate isomerase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.41 Echvi_0167 phosphoribosylamine--glycine ligase 0.47 Echvi_4036 Glucose-6-phosphate isomerase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_20115 phosphoribosylamine--glycine ligase 0.50 CA264_07470 glucose-6-phosphate isomerase low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS09255 phosphoribosylamine--glycine ligase 0.39 A4249_RS14585 glucose-6-phosphate isomerase low > 48
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_1441 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.31 Ga0059261_1948 Glucose-6-phosphate isomerase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.39 ABZR88_RS01620 phosphoribosylamine--glycine ligase 0.48 ABZR88_RS03585 glucose-6-phosphate isomerase — —
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS22605 phosphoribosylamine--glycine ligase 0.47 CA265_RS17975 glucose-6-phosphate isomerase — —
Mycobacterium tuberculosis H37Rv 0.32 Rv0772 Probable phosphoribosylamine--glycine ligase PurD (GARS) (glycinamide ribonucleotide synthetase) (phosphoribosylglycinamide synthetase) (5'-phosphoribosylglycinamide synthetase) 0.46 Rv0946c Probable glucose-6-phosphate isomerase Pgi (GPI) (phosphoglucose isomerase) (phosphohexose isomerase) (phi) — —

Not shown: 13 genomes with orthologs for BPHYT_RS06405 only; 0 genomes with orthologs for BPHYT_RS09500 only