Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS16975 | | shikimate 5-dehydrogenase | 1.0 | BPHYT_RS06545 | | acetolactate synthase | 0.73 | 14 |
Paraburkholderia graminis OAS925 | 0.93 | ABIE53_003560 | | shikimate dehydrogenase | 0.99 | ABIE53_001574 | | acetolactate synthase-1/2/3 large subunit | — | — |
Paraburkholderia bryophila 376MFSha3.1 | 0.90 | H281DRAFT_06291 | | shikimate dehydrogenase (EC 1.1.1.25) | 0.99 | H281DRAFT_04551 | | acetolactate synthase, large subunit | — | — |
Paraburkholderia sabiae LMG 24235 | 0.81 | QEN71_RS27130 | | shikimate dehydrogenase | 0.97 | QEN71_RS24225 | | acetolactate synthase 3 catalytic subunit | 0.69 | 48 |
Ralstonia solanacearum PSI07 | 0.55 | RPSI07_RS11300 | | shikimate dehydrogenase | 0.82 | RPSI07_RS14255 | | acetolactate synthase, large subunit, biosynthetic type | — | — |
Ralstonia solanacearum IBSBF1503 | 0.54 | RALBFv3_RS05945 | | shikimate dehydrogenase | 0.82 | RALBFv3_RS03050 | | acetolactate synthase 3 large subunit | — | — |
Ralstonia solanacearum UW163 | 0.54 | UW163_RS07680 | | shikimate dehydrogenase | 0.82 | UW163_RS10675 | | acetolactate synthase 3 large subunit | — | — |
Ralstonia solanacearum GMI1000 | 0.54 | RS_RS13890 | | shikimate dehydrogenase | 0.81 | RS_RS10420 | | acetolactate synthase 3 large subunit | — | — |
Ralstonia sp. UNC404CL21Col | 0.54 | ABZR87_RS01605 | | shikimate dehydrogenase | 0.81 | ABZR87_RS14955 | | acetolactate synthase 3 catalytic subunit | 0.52 | 47 |
Herbaspirillum seropedicae SmR1 | 0.51 | HSERO_RS01990 | | shikimate 5-dehydrogenase | 0.74 | HSERO_RS08650 | | acetolactate synthase | 0.74 | 14 |
Cupriavidus basilensis FW507-4G11 | 0.51 | RR42_RS17645 | | shikimate dehydrogenase | 0.80 | RR42_RS05435 | | acetolactate synthase 3 catalytic subunit | — | — |
Pseudomonas sp. S08-1 | 0.47 | OH686_12485 | | Shikimate 5-dehydrogenase I alpha | 0.58 | OH686_08130 | | acetolactate synthase, large subunit, biosynthetic type | low | > 80 |
Pseudomonas putida KT2440 | 0.47 | PP_0074 | | shikimate 5-dehydrogenase | 0.57 | PP_4680 | | acetohydroxybutanoate synthase / acetolactate synthase | — | — |
Shewanella sp. ANA-3 | 0.47 | Shewana3_0043 | aroE | shikimate 5-dehydrogenase (RefSeq) | 0.57 | Shewana3_2269 | | acetolactate synthase 3 catalytic subunit (RefSeq) | low | > 73 |
Pseudomonas syringae pv. syringae B728a | 0.46 | Psyr_0025 | | shikimate dehydrogenase | 0.58 | Psyr_0846 | | acetolactate synthase, large subunit | 0.63 | 20 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.46 | Psyr_0025 | | shikimate dehydrogenase | 0.58 | Psyr_0846 | | acetolactate synthase, large subunit | 0.72 | 3 |
Pseudomonas sp. RS175 | 0.46 | PFR28_04655 | | Shikimate dehydrogenase (NADP(+)) | 0.57 | PFR28_03699 | | Acetolactate synthase isozyme 3 large subunit | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.45 | AO356_11315 | | shikimate dehydrogenase | 0.56 | AO356_16170 | | acetolactate synthase 3 catalytic subunit | 0.56 | 10 |
Pseudomonas simiae WCS417 | 0.45 | PS417_00125 | | shikimate dehydrogenase | 0.57 | PS417_23810 | | acetolactate synthase 3 catalytic subunit | — | — |
Pseudomonas fluorescens SBW25 | 0.45 | PFLU_RS00120 | | shikimate dehydrogenase | 0.57 | PFLU_RS25650 | | acetolactate synthase 3 large subunit | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.45 | Pf6N2E2_4130 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.56 | Pf6N2E2_5175 | | Acetolactate synthase large subunit (EC 2.2.1.6) | — | — |
Pseudomonas fluorescens FW300-N1B4 | 0.45 | Pf1N1B4_1906 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.57 | Pf1N1B4_2878 | | Acetolactate synthase large subunit (EC 2.2.1.6) | 0.63 | 4 |
Pseudomonas fluorescens SBW25-INTG | 0.45 | PFLU_RS00120 | | shikimate dehydrogenase | 0.57 | PFLU_RS25650 | | acetolactate synthase 3 large subunit | — | — |
Marinobacter adhaerens HP15 | 0.45 | HP15_3750 | | shikimate dehydrogenase | 0.59 | HP15_531 | | acetolactate synthase, large subunit, biosynthetic type | — | — |
Vibrio cholerae E7946 ATCC 55056 | 0.45 | CSW01_00280 | | shikimate dehydrogenase | 0.56 | CSW01_12565 | | acetolactate synthase 3 large subunit | low | > 62 |
Pseudomonas fluorescens GW456-L13 | 0.45 | PfGW456L13_644 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.56 | PfGW456L13_1538 | | Acetolactate synthase large subunit (EC 2.2.1.6) | 0.80 | 10 |
Castellaniella sp019104865 MT123 | 0.44 | ABCV34_RS11630 | | shikimate dehydrogenase | 0.70 | ABCV34_RS01210 | | acetolactate synthase 3 catalytic subunit | low | > 48 |
Pseudomonas stutzeri RCH2 | 0.44 | Psest_0029 | | shikimate 5-dehydrogenase | 0.58 | Psest_1036 | | acetolactate synthase, large subunit, biosynthetic type | — | — |
Shewanella oneidensis MR-1 | 0.44 | SO0040 | aroE | shikimate 5-dehydrogenase (NCBI ptt file) | 0.57 | SO2279 | ilvI | acetolactate synthase III, large subunit (NCBI ptt file) | low | > 76 |
Pseudomonas fluorescens FW300-N2E3 | 0.44 | AO353_10670 | | shikimate dehydrogenase | 0.57 | AO353_14495 | | acetolactate synthase 3 catalytic subunit | 0.79 | 3 |
Shewanella amazonensis SB2B | 0.41 | Sama_0052 | | shikimate dehydrogenase (RefSeq) | 0.56 | Sama_2018 | | acetolactate synthase 3 catalytic subunit (RefSeq) | low | > 62 |
Pantoea sp. MT58 | 0.40 | IAI47_02315 | | shikimate dehydrogenase | 0.55 | IAI47_15990 | | acetolactate synthase 3 large subunit | — | — |
Shewanella loihica PV-4 | 0.40 | Shew_3727 | | shikimate 5-dehydrogenase (RefSeq) | 0.56 | Shew_1776 | | acetolactate synthase 3 catalytic subunit (RefSeq) | low | > 60 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.39 | OHPLBJKB_00422 | | Shikimate dehydrogenase (NADP(+)) | 0.55 | OHPLBJKB_03581 | | Acetolactate synthase isozyme 3 large subunit | low | > 73 |
Escherichia coli BW25113 | 0.39 | b3281 | aroE | dehydroshikimate reductase, NAD(P)-binding (NCBI) | 0.55 | b0077 | ilvI | acetolactate synthase III large subunit (NCBI) | low | > 76 |
Escherichia coli BL21 | 0.39 | ECD_03132 | | dehydroshikimate reductase, NAD(P)-binding | 0.55 | ECD_00079 | | acetolactate synthase 3 large subunit | low | > 61 |
Escherichia coli ECRC62 | 0.39 | BNILDI_02165 | aroE | shikimate dehydrogenase | 0.55 | BNILDI_08565 | ilvI | acetolactate synthase 3 large subunit | low | > 75 |
Escherichia coli ECOR27 | 0.39 | NOLOHH_09355 | aroE | shikimate dehydrogenase | 0.55 | NOLOHH_03045 | ilvI | acetolactate synthase 3 large subunit | low | > 75 |
Escherichia coli ECOR38 | 0.39 | HEPCGN_16385 | aroE | shikimate dehydrogenase | 0.55 | HEPCGN_08680 | ilvI | acetolactate synthase 3 large subunit | low | > 87 |
Escherichia coli ECRC100 | 0.38 | OKFHMN_17565 | aroE | shikimate dehydrogenase | 0.55 | OKFHMN_10700 | ilvI | acetolactate synthase 3 large subunit | low | > 80 |
Escherichia coli ECRC99 | 0.38 | KEDOAH_10585 | aroE | shikimate dehydrogenase | 0.55 | KEDOAH_17455 | ilvI | acetolactate synthase 3 large subunit | — | — |
Escherichia coli ECRC101 | 0.38 | MCAODC_08085 | aroE | shikimate dehydrogenase | 0.55 | MCAODC_01215 | ilvI | acetolactate synthase 3 large subunit | low | > 87 |
Escherichia coli ECRC98 | 0.38 | JDDGAC_21185 | aroE | shikimate dehydrogenase | 0.55 | JDDGAC_14295 | ilvI | acetolactate synthase 3 large subunit | low | > 86 |
Escherichia coli ECRC102 | 0.38 | NIAGMN_15325 | aroE | shikimate dehydrogenase | 0.55 | NIAGMN_08550 | ilvI | acetolactate synthase 3 large subunit | — | — |
Acidovorax sp. GW101-3H11 | 0.38 | Ac3H11_4044 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.72 | Ac3H11_525 | | Acetolactate synthase large subunit (EC 2.2.1.6) | 0.83 | 26 |
Escherichia coli Nissle 1917 | 0.38 | ECOLIN_RS18840 | | shikimate dehydrogenase | 0.55 | ECOLIN_RS00415 | | acetolactate synthase 3 large subunit | low | > 55 |
Escherichia fergusonii Becca | 0.38 | EFB2_00542 | | Shikimate dehydrogenase (NADP(+)) | 0.55 | EFB2_03969 | | Acetolactate synthase isozyme 3 large subunit | low | > 86 |
Enterobacter asburiae PDN3 | 0.37 | EX28DRAFT_0046 | | shikimate dehydrogenase | 0.55 | EX28DRAFT_3673 | | acetolactate synthase, large subunit (EC 2.2.1.6) | low | > 76 |
Serratia liquefaciens MT49 | 0.37 | IAI46_23240 | | shikimate dehydrogenase | 0.56 | IAI46_03375 | | acetolactate synthase 3 large subunit | low | > 86 |
Erwinia tracheiphila SCR3 | 0.37 | LU632_RS22445 | aroE | shikimate dehydrogenase | 0.57 | LU632_RS02885 | ilvI | acetolactate synthase 3 large subunit | low | > 74 |
Klebsiella michiganensis M5al | 0.36 | BWI76_RS25645 | | shikimate dehydrogenase | 0.55 | BWI76_RS04695 | | acetolactate synthase 3 large subunit | low | > 92 |
Enterobacter sp. TBS_079 | 0.36 | MPMX20_04189 | | Shikimate dehydrogenase (NADP(+)) | 0.55 | MPMX20_00771 | | Acetolactate synthase isozyme 3 large subunit | low | > 85 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.36 | GFF2397 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.54 | GFF161 | | Acetolactate synthase large subunit (EC 2.2.1.6) | low | > 78 |
Variovorax sp. SCN45 | 0.35 | GFF4456 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.73 | GFF1158 | | Acetolactate synthase large subunit (EC 2.2.1.6) | — | — |
Acinetobacter radioresistens SK82 | 0.35 | MPMX26_02748 | | Shikimate dehydrogenase (NADP(+)) | 0.56 | MPMX26_00472 | | Acetolactate synthase isozyme 3 large subunit | 0.75 | 29 |
Dickeya dadantii 3937 | 0.35 | DDA3937_RS19100 | | shikimate dehydrogenase | 0.56 | DDA3937_RS18105 | | acetolactate synthase 3 large subunit | — | — |
Alteromonas macleodii MIT1002 | 0.35 | MIT1002_00029 | | Shikimate dehydrogenase | 0.54 | MIT1002_00503 | | Acetolactate synthase isozyme 3 large subunit | — | — |
Dickeya dianthicola ME23 | 0.35 | DZA65_RS20315 | | shikimate dehydrogenase | 0.56 | DZA65_RS19185 | | acetolactate synthase 3 large subunit | — | — |
Dickeya dianthicola 67-19 | 0.35 | HGI48_RS19190 | | shikimate dehydrogenase | 0.56 | HGI48_RS18040 | | acetolactate synthase 3 large subunit | — | — |
Variovorax sp. OAS795 | 0.34 | ABID97_RS06300 | | shikimate dehydrogenase | 0.72 | ABID97_RS14885 | | acetolactate synthase 3 catalytic subunit | — | — |
Pectobacterium carotovorum WPP14 | 0.33 | HER17_RS02250 | | shikimate dehydrogenase | 0.56 | HER17_RS03095 | | acetolactate synthase 3 large subunit | low | > 75 |
Xanthomonas campestris pv. campestris strain 8004 | 0.30 | Xcc-8004.5020.1 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.35 | Xcc-8004.1059.1 | | Acetolactate synthase large subunit (EC 2.2.1.6) | 0.82 | 25 |
Lysobacter sp. OAE881 | 0.29 | ABIE51_RS01815 | | shikimate dehydrogenase | 0.39 | ABIE51_RS17550 | | acetolactate synthase 2 catalytic subunit | 0.71 | 20 |
Methanococcus maripaludis S2 | 0.21 | MMP_RS04855 | | shikimate dehydrogenase | 0.39 | MMP_RS03415 | | acetolactate synthase large subunit | — | — |
Methanococcus maripaludis JJ | 0.21 | MMJJ_RS00280 | | shikimate dehydrogenase | 0.39 | MMJJ_RS01650 | | acetolactate synthase large subunit | — | — |
Rhodopseudomonas palustris CGA009 | 0.21 | TX73_022410 | | shikimate dehydrogenase | 0.52 | TX73_010465 | | acetolactate synthase 3 large subunit | — | — |
Sinorhizobium meliloti 1021 | 0.20 | SMc02791 | | shikimate 5-dehydrogenase | 0.53 | SMc01431 | | acetolactate synthase 3 catalytic subunit | — | — |
Desulfovibrio vulgaris Hildenborough JW710 | 0.20 | DVU0115 | aroE | shikimate 5-dehydrogenase (TIGR) | 0.51 | DVU1376 | ilvB-2 | acetolactate synthase, large subunit, biosynthetic type (TIGR) | — | — |
Synechococcus elongatus PCC 7942 | 0.20 | Synpcc7942_2467 | aroE | shikimate 5-dehydrogenase | 0.47 | Synpcc7942_0139 | ilvB | acetolactate synthase 3 catalytic subunit | — | — |
Desulfovibrio vulgaris Miyazaki F | 0.20 | DvMF_1962 | | shikimate 5-dehydrogenase (RefSeq) | 0.50 | DvMF_0153 | | acetolactate synthase, large subunit, biosynthetic type (RefSeq) | — | — |
Phaeobacter inhibens DSM 17395 | 0.19 | PGA1_c35150 | | shikimate dehydrogenase AroE | 0.49 | PGA1_c20210 | | acetolactate synthase isozyme 3 large subunit | — | — |
Rhodospirillum rubrum S1H | 0.19 | Rru_A3613 | | Quinate/Shikimate 5-dehydrogenase (NCBI) | 0.53 | Rru_A0467 | | Acetolactate synthase, large subunit, biosynthetic type (NCBI) | — | — |
Rhizobium sp. OAE497 | 0.19 | ABIE40_RS19250 | | shikimate dehydrogenase | 0.54 | ABIE40_RS11495 | | acetolactate synthase 3 large subunit | — | — |
Azospirillum sp. SherDot2 | 0.19 | MPMX19_02560 | | Shikimate dehydrogenase (NADP(+)) | 0.54 | MPMX19_01776 | | Acetolactate synthase isozyme 3 large subunit | — | — |
Bosea sp. OAE506 | 0.18 | ABIE41_RS04650 | | shikimate dehydrogenase | 0.52 | ABIE41_RS12890 | | acetolactate synthase 3 large subunit | — | — |
Azospirillum brasilense Sp245 | 0.18 | AZOBR_RS01765 | | shikimate 5-dehydrogenase | 0.55 | AZOBR_RS06560 | | acetolactate synthase | — | — |
Caulobacter crescentus NA1000 | 0.17 | CCNA_00003 | | shikimate dehydrogenase (EC 1.1.1.25) (from data) | 0.55 | CCNA_02185 | | acetolactate synthase large subunit | 0.90 | 23 |
Caulobacter crescentus NA1000 Δfur | 0.17 | CCNA_00003 | | shikimate 5-dehydrogenase | 0.55 | CCNA_02185 | | acetolactate synthase large subunit | low | > 67 |
Parabacteroides merdae CL09T00C40 | 0.15 | HMPREF1078_RS14200 | | shikimate dehydrogenase | 0.37 | HMPREF1078_RS16690 | | biosynthetic-type acetolactate synthase large subunit | 0.87 | 60 |
Bacteroides stercoris CC31F | 0.15 | HMPREF1181_RS06320 | | shikimate dehydrogenase | 0.37 | HMPREF1181_RS08330 | | biosynthetic-type acetolactate synthase large subunit | 0.79 | 36 |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.15 | ABZR88_RS20055 | | shikimate dehydrogenase | 0.37 | ABZR88_RS11580 | | biosynthetic-type acetolactate synthase large subunit | — | — |
Phocaeicola vulgatus CL09T03C04 | 0.14 | HMPREF1058_RS16750 | | shikimate dehydrogenase | 0.36 | HMPREF1058_RS16820 | | biosynthetic-type acetolactate synthase large subunit | low | > 67 |
Phocaeicola dorei CL03T12C01 | 0.14 | ABI39_RS12665 | | shikimate dehydrogenase | 0.36 | ABI39_RS12720 | | biosynthetic-type acetolactate synthase large subunit | 0.83 | 15 |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.14 | Echvi_1145 | | Shikimate 5-dehydrogenase | 0.38 | Echvi_2056 | | acetolactate synthase, large subunit, biosynthetic type | — | — |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.14 | CA264_19075 | | shikimate dehydrogenase | 0.36 | CA264_06930 | | acetolactate synthase, large subunit, biosynthetic type | — | — |
Magnetospirillum magneticum AMB-1 | 0.14 | AMB_RS23010 | | shikimate dehydrogenase | 0.54 | AMB_RS17740 | | acetolactate synthase 3 large subunit | — | — |
Pedobacter sp. GW460-11-11-14-LB5 | 0.13 | CA265_RS19745 | | shikimate dehydrogenase (EC 1.1.1.25) (from data) | 0.36 | CA265_RS15805 | | acetolactate synthase, large subunit, biosynthetic type | — | — |
Bacteroides ovatus ATCC 8483 | 0.13 | BACOVA_05065 | | putative shikimate dehydrogenase | 0.36 | BACOVA_03303 | | acetolactate synthase, large subunit, biosynthetic type | — | — |
Bacteroides thetaiotaomicron VPI-5482 | 0.13 | BT4215 | | shikimate dehydrogenase (EC 1.1.1.25) (from data) | 0.37 | BT2077 | | acetolactate synthase large subunit (NCBI ptt file) | — | — |
Mycobacterium tuberculosis H37Rv | 0.11 | Rv2552c | | Probable shikimate 5-dehydrogenase AroE (5-dehydroshikimate reductase) | 0.44 | Rv3003c | | Acetolactate synthase (large subunit) IlvB1 (acetohydroxy-acid synthase) | — | — |
Not shown: 1 genomes with orthologs for BPHYT_RS16975 only; 8 genomes with orthologs for BPHYT_RS06545 only