Conservation of cofitness between BPHYT_RS16245 and BPHYT_RS03640 in Burkholderia phytofirmans PsJN

88 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16245 phosphoribosylaminoimidazole carboxylase 1.0 BPHYT_RS03640 phosphoribosylformylglycinamidine cyclo-ligase 0.82 6
Paraburkholderia bryophila 376MFSha3.1 0.95 H281DRAFT_04185 5-(carboxyamino)imidazole ribonucleotide synthase 0.91 H281DRAFT_04710 phosphoribosylformylglycinamidine cyclo-ligase — —
Paraburkholderia graminis OAS925 0.92 ABIE53_003423 5-(carboxyamino)imidazole ribonucleotide synthase 0.99 ABIE53_000874 phosphoribosylformylglycinamidine cyclo-ligase — —
Paraburkholderia sabiae LMG 24235 0.85 QEN71_RS02450 5-(carboxyamino)imidazole ribonucleotide synthase 0.92 QEN71_RS26445 phosphoribosylformylglycinamidine cyclo-ligase 0.61 24
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase 0.76 HSERO_RS03165 phosphoribosylaminoimidazole synthetase — —
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS03230 phosphoribosylaminoimidazole carboxylase 0.79 RR42_RS17220 phosphoribosylaminoimidazole synthetase — —
Variovorax sp. SCN45 0.49 GFF5513 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18) 0.67 GFF3941 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.94 10
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS08090 5-(carboxyamino)imidazole ribonucleotide synthase 0.75 ABZR87_RS00915 phosphoribosylformylglycinamidine cyclo-ligase — —
Ralstonia solanacearum GMI1000 0.49 RS_RS02885 5-(carboxyamino)imidazole ribonucleotide synthase 0.73 RS_RS13145 phosphoribosylformylglycinamidine cyclo-ligase — —
Ralstonia solanacearum PSI07 0.49 RPSI07_RS21130 5-(carboxyamino)imidazole ribonucleotide synthase 0.73 RPSI07_RS12020 phosphoribosylformylglycinamidine cyclo-ligase — —
Ralstonia solanacearum UW163 0.49 UW163_RS01410 5-(carboxyamino)imidazole ribonucleotide synthase 0.72 UW163_RS08345 phosphoribosylformylglycinamidine cyclo-ligase — —
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS12200 5-(carboxyamino)imidazole ribonucleotide synthase 0.72 RALBFv3_RS05280 phosphoribosylformylglycinamidine cyclo-ligase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF2770 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.64 GFF3433 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Castellaniella sp019104865 MT123 0.48 ABCV34_RS00565 5-(carboxyamino)imidazole ribonucleotide synthase 0.65 ABCV34_RS08795 phosphoribosylformylglycinamidine cyclo-ligase — —
Variovorax sp. OAS795 0.48 ABID97_RS01700 5-(carboxyamino)imidazole ribonucleotide synthase 0.66 ABID97_RS08700 phosphoribosylformylglycinamidine cyclo-ligase — —
Acidovorax sp. GW101-3H11 0.44 Ac3H11_675 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.65 Ac3H11_1318 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Dechlorosoma suillum PS 0.42 Dsui_0091 phosphoribosylaminoimidazole carboxylase, PurK protein 0.74 Dsui_1519 phosphoribosylaminoimidazole synthetase — —
Caulobacter crescentus NA1000 0.36 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.53 CCNA_01775 phosphoribosylformylglycinamidine cyclo-ligase 0.87 14
Caulobacter crescentus NA1000 Δfur 0.36 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.53 CCNA_01775 phosphoribosylformylglycinamidine cyclo-ligase low > 67
Sinorhizobium meliloti 1021 0.35 SMc04002 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.50 SMc00615 phosphoribosylaminoimidazole synthetase 0.95 6
Rhizobium sp. OAE497 0.35 ABIE40_RS16070 5-(carboxyamino)imidazole ribonucleotide synthase 0.52 ABIE40_RS06560 phosphoribosylformylglycinamidine cyclo-ligase 0.86 23
Azospirillum sp. SherDot2 0.34 MPMX19_01418 N5-carboxyaminoimidazole ribonucleotide synthase 0.54 MPMX19_01304 Phosphoribosylformylglycinamidine cyclo-ligase — —
Azospirillum brasilense Sp245 0.34 AZOBR_RS06140 phosphoribosylaminoimidazole carboxylase 0.54 AZOBR_RS16290 phosphoribosylaminoimidazole synthetase — —
Agrobacterium fabrum C58 0.33 Atu3755 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.52 Atu1141 Phosphoribosylglycinamide synthetase 0.94 2
Rhodospirillum rubrum S1H 0.33 Rru_A1051 Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) 0.53 Rru_A2167 Phosphoribosylformylglycinamidine cyclo-ligase (NCBI) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.32 A4249_RS08935 5-(carboxyamino)imidazole ribonucleotide synthase 0.50 A4249_RS08210 phosphoribosylformylglycinamidine cyclo-ligase — —
Magnetospirillum magneticum AMB-1 0.32 AMB_RS11140 5-(carboxyamino)imidazole ribonucleotide synthase 0.56 AMB_RS14330 phosphoribosylformylglycinamidine cyclo-ligase — —
Bosea sp. OAE506 0.31 ABIE41_RS09245 5-(carboxyamino)imidazole ribonucleotide synthase 0.49 ABIE41_RS17040 phosphoribosylformylglycinamidine cyclo-ligase low > 77
Dinoroseobacter shibae DFL-12 0.31 Dshi_0680 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) 0.53 Dshi_1889 phosphoribosylformylglycinamidine cyclo-ligase (RefSeq) 0.89 2
Bifidobacterium breve UCC2003 0.30 BBR_RS13300 5-(carboxyamino)imidazole ribonucleotide synthase 0.46 BBR_RS13375 phosphoribosylformylglycinamidine cyclo-ligase low > 34
Pseudomonas stutzeri RCH2 0.29 Psest_4068 phosphoribosylaminoimidazole carboxylase, PurK protein 0.59 Psest_1474 phosphoribosylaminoimidazole synthetase — —
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_1428 5-(carboxyamino)imidazole ribonucleotide synthase 0.51 Ga0059261_0228 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Acinetobacter radioresistens SK82 0.29 MPMX26_03050 N5-carboxyaminoimidazole ribonucleotide synthase 0.60 MPMX26_02206 Phosphoribosylformylglycinamidine cyclo-ligase 0.88 10
Phaeobacter inhibens DSM 17395 0.29 PGA1_c24870 phosphoribosylaminoimidazole carboxylase ATPase subunit PurK 0.53 PGA1_c13260 phosphoribosylformylglycinamidine cyclo-ligase PurM 0.91 2
Pseudomonas sp. RS175 0.29 PFR28_04495 N5-carboxyaminoimidazole ribonucleotide synthase 0.60 PFR28_03217 Phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_4081 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.60 Pf6N2E2_5729 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Pseudomonas putida KT2440 0.28 PP_5335 N5-carboxyaminoimidazole ribonucleotide synthase 0.60 PP_1665 Phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas sp. S08-1 0.28 OH686_13380 N5-carboxyaminoimidazole ribonucleotide synthase 0.58 OH686_18995 Phosphoribosylformylglycinamidine cyclo-ligase — —
Rhodopseudomonas palustris CGA009 0.28 TX73_021645 5-(carboxyamino)imidazole ribonucleotide synthase 0.49 TX73_015785 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_2028 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.60 Pf1N1B4_3698 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Pseudomonas fluorescens SBW25 0.28 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase 0.60 PFLU_RS22065 phosphoribosylformylglycinamidine cyclo-ligase — —
Mycobacterium tuberculosis H37Rv 0.28 Rv3276c Probable phosphoribosylaminoimidazole carboxylase ATPase subunit PurK (air carboxylase) (AIRC) 0.39 Rv0809 Probable phosphoribosylformylglycinamidine CYCLO-ligase PurM (AIRS) (phosphoribosyl-aminoimidazole synthetase) (air synthase) — —
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_11075 phosphoribosylaminoimidazole carboxylase 0.60 AO356_19090 phosphoribosylaminoimidazole synthetase — —
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase 0.60 PFLU_RS22065 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_747 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.60 PfGW456L13_4252 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_09935 phosphoribosylaminoimidazole carboxylase 0.60 AO353_02680 phosphoribosylaminoimidazole synthetase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase 0.60 Psyr_3689 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase 0.60 Psyr_3689 phosphoribosylformylglycinamidine cyclo-ligase — —
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.51 OKGIIK_02315 purM phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas simiae WCS417 0.27 PS417_28115 phosphoribosylaminoimidazole carboxylase 0.60 PS417_20120 phosphoribosylaminoimidazole synthetase — —
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 ABZR86_RS19865 phosphoribosylformylglycinamidine cyclo-ligase — —
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.2012.1 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.55 Xcc-8004.1676.1 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.89 4
Lysobacter sp. OAE881 0.27 ABIE51_RS15390 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 ABIE51_RS15890 phosphoribosylformylglycinamidine cyclo-ligase low > 62
Rhodanobacter denitrificans MT42 0.26 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 LRK55_RS12645 phosphoribosylformylglycinamidine cyclo-ligase low > 63
Marinobacter adhaerens HP15 0.26 HP15_2350 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.57 HP15_1299 phosphoribosylaminoimidazole synthetase — —
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 LRK54_RS12945 phosphoribosylformylglycinamidine cyclo-ligase — —
Alteromonas macleodii MIT1002 0.25 MIT1002_00522 N5-carboxyaminoimidazole ribonucleotide synthase 0.58 MIT1002_02219 Phosphoribosylformylglycinamidine cyclo-ligase 0.98 22
Synechococcus elongatus PCC 7942 0.24 Synpcc7942_1428 purK phosphoribosylaminoimidazole carboxylase ATPase subunit 0.48 Synpcc7942_0851 purM phosphoribosylaminoimidazole synthetase — —
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase 0.57 CSW01_11350 phosphoribosylformylglycinamidine cyclo-ligase low > 62
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_0610 5-(carboxyamino)imidazole ribonucleotide synthase 0.60 B158DRAFT_2385 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF4438 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.58 GFF2169 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) low > 78
Shewanella loihica PV-4 0.21 Shew_1249 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) 0.57 Shew_1513 phosphoribosylaminoimidazole synthetase (RefSeq) — —
Klebsiella michiganensis M5al 0.20 BWI76_RS07065 5-(carboxyamino)imidazole ribonucleotide synthase 0.58 BWI76_RS20965 phosphoribosylformylglycinamidine cyclo-ligase 0.86 7
Rahnella sp. WP5 0.20 EX31_RS22620 5-(carboxyamino)imidazole ribonucleotide synthase 0.59 EX31_RS22695 phosphoribosylformylglycinamidine cyclo-ligase 0.94 4
Serratia liquefaciens MT49 0.20 IAI46_05370 5-(carboxyamino)imidazole ribonucleotide synthase 0.59 IAI46_18885 phosphoribosylformylglycinamidine cyclo-ligase low > 86
Enterobacter asburiae PDN3 0.19 EX28DRAFT_2460 phosphoribosylaminoimidazole carboxylase, PurK protein 0.60 EX28DRAFT_0168 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Pantoea sp. MT58 0.19 IAI47_14355 5-(carboxyamino)imidazole ribonucleotide synthase 0.59 IAI47_05180 phosphoribosylformylglycinamidine cyclo-ligase 0.97 3
Escherichia coli BW25113 0.19 b0522 purK phosphoribosylaminoimidazole carboxylase (NCBI) 0.58 b2499 purM phosphoribosylaminoimidazole synthetase (NCBI) 0.94 5
Enterobacter sp. TBS_079 0.19 MPMX20_01097 N5-carboxyaminoimidazole ribonucleotide synthase 0.60 MPMX20_03354 Phosphoribosylformylglycinamidine cyclo-ligase 0.95 3
Escherichia coli Nissle 1917 0.19 ECOLIN_RS03025 5-(carboxyamino)imidazole ribonucleotide synthase 0.58 ECOLIN_RS14190 phosphoribosylformylglycinamidine cyclo-ligase 0.67 4
Escherichia coli ECOR38 0.19 HEPCGN_06480 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.58 HEPCGN_20975 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.95 3
Escherichia coli ECOR27 0.19 NOLOHH_00830 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.58 NOLOHH_13460 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.91 10
Escherichia coli BL21 0.19 ECD_00472 N5-carboxyaminoimidazole ribonucleotide synthase 0.58 ECD_02391 phosphoribosylaminoimidazole synthetase 0.90 5
Escherichia fergusonii Becca 0.19 EFB2_03540 N5-carboxyaminoimidazole ribonucleotide synthase 0.58 EFB2_01399 Phosphoribosylformylglycinamidine cyclo-ligase low > 86
Escherichia coli ECRC102 0.19 NIAGMN_05895 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.58 NIAGMN_19580 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECRC62 0.19 BNILDI_22260 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.58 BNILDI_12270 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.93 14
Escherichia coli ECRC98 0.19 JDDGAC_11490 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.58 JDDGAC_25755 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.83 1
Escherichia coli ECRC100 0.19 OKFHMN_07840 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.58 OKFHMN_21810 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.96 1
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_03159 N5-carboxyaminoimidazole ribonucleotide synthase 0.58 OHPLBJKB_01227 Phosphoribosylformylglycinamidine cyclo-ligase low > 73
Escherichia coli ECRC101 0.19 MCAODC_27060 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.58 MCAODC_12340 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.89 7
Escherichia coli ECRC99 0.19 KEDOAH_20130 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.58 KEDOAH_06410 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Dickeya dianthicola 67-19 0.18 HGI48_RS15190 5-(carboxyamino)imidazole ribonucleotide synthase 0.58 HGI48_RS06070 phosphoribosylformylglycinamidine cyclo-ligase 0.74 10
Dickeya dianthicola ME23 0.18 DZA65_RS15995 5-(carboxyamino)imidazole ribonucleotide synthase 0.58 DZA65_RS06420 phosphoribosylformylglycinamidine cyclo-ligase 0.88 6
Dickeya dadantii 3937 0.18 DDA3937_RS15110 5-(carboxyamino)imidazole ribonucleotide synthase 0.59 DDA3937_RS06025 phosphoribosylformylglycinamidine cyclo-ligase 0.86 7
Pectobacterium carotovorum WPP14 0.18 HER17_RS06470 5-(carboxyamino)imidazole ribonucleotide synthase 0.61 HER17_RS15465 phosphoribosylformylglycinamidine cyclo-ligase 0.91 49
Erwinia tracheiphila SCR3 0.18 LU632_RS15250 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.59 LU632_RS08275 purM phosphoribosylformylglycinamidine cyclo-ligase 0.88 3
Shewanella amazonensis SB2B 0.17 Sama_1063 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.56 Sama_2097 phosphoribosylaminoimidazole synthetase (RefSeq) 0.95 4
Shewanella sp. ANA-3 0.16 Shewana3_3156 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.56 Shewana3_2545 phosphoribosylaminoimidazole synthetase (RefSeq) 0.93 7
Shewanella oneidensis MR-1 0.15 SO3555 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) 0.57 SO2760 purM phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) 0.96 6

Not shown: 4 genomes with orthologs for BPHYT_RS16245 only; 5 genomes with orthologs for BPHYT_RS03640 only