Conservation of cofitness between B158DRAFT_0063 and B158DRAFT_0164 in Kangiella aquimarina DSM 16071

88 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Kangiella aquimarina DSM 16071 1.0 B158DRAFT_0063 acetate--CoA ligase 1.0 B158DRAFT_0164 tRNA-U20-dihydrouridine synthase 0.42 10
Pseudomonas sp. S08-1 0.71 OH686_17225 acetate--CoA ligase 0.64 OH686_07610 tRNA-dihydrouridine synthase DusB low > 80
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_5149 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.63 Pf6N2E2_3517 tRNA dihydrouridine synthase B (EC 1.-.-.-) low > 103
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_2849 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.63 Pf1N1B4_1313 tRNA dihydrouridine synthase B (EC 1.-.-.-) low > 87
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_14365 acetyl-CoA synthetase 0.62 AO353_13660 tRNA-dihydrouridine synthase B low > 101
Pseudomonas sp. RS175 0.69 PFR28_03725 Acetyl-coenzyme A synthetase 0.63 PFR28_05216 tRNA-dihydrouridine synthase B low > 88
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_1517 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.62 PfGW456L13_55 tRNA dihydrouridine synthase B (EC 1.-.-.-) low > 87
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_16045 acetyl-CoA synthetase 0.63 AO356_08215 tRNA-dihydrouridine synthase B low > 104
Pseudomonas fluorescens SBW25 0.69 PFLU_RS25765 acetate--CoA ligase 0.61 PFLU_RS03025 tRNA dihydrouridine synthase DusB low > 109
Pseudomonas simiae WCS417 0.69 PS417_23925 acetyl-CoA synthetase 0.61 PS417_02950 tRNA-dihydrouridine synthase B low > 88
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS25765 acetate--CoA ligase 0.61 PFLU_RS03025 tRNA dihydrouridine synthase DusB low > 109
Pseudomonas putida KT2440 0.68 PP_4702 acetyl-CoA synthetase 0.63 PP_4820 tRNA-dihydrouridine synthase B low > 96
Azospirillum brasilense Sp245 0.67 AZOBR_RS00270 acetyl-CoA synthetase 0.43 AZOBR_RS14420 tRNA-dihydrouridine synthase low > 97
Rhodopseudomonas palustris CGA009 0.67 TX73_001095 acetate--CoA ligase 0.36 TX73_013410 tRNA dihydrouridine synthase DusB low > 86
Sinorhizobium meliloti 1021 0.66 SMc04093 acetyl-CoA synthetase 0.35 SMc01041 NIFR3-like protein low > 103
Magnetospirillum magneticum AMB-1 0.66 AMB_RS21140 acetate--CoA ligase 0.46 AMB_RS11940 tRNA dihydrouridine synthase DusB low > 64
Rhodospirillum rubrum S1H 0.66 Rru_A3575 Acetate--CoA ligase (NCBI) 0.34 Rru_A1676 Dihydrouridine synthase TIM-barrel protein nifR3 (NCBI) low > 58
Azospirillum sp. SherDot2 0.65 MPMX19_02038 Acetyl-coenzyme A synthetase 0.43 MPMX19_01110 tRNA-dihydrouridine synthase B low > 112
Marinobacter adhaerens HP15 0.65 HP15_811 acetyl-CoA synthetase 0.66 HP15_3225 tRNA-dihydrouridine synthase B low > 73
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_01520 acetyl-coenzyme A synthetase 0.63 CSW01_01495 tRNA dihydrouridine synthase DusB low > 62
Agrobacterium fabrum C58 0.65 Atu2745 acetyl-coenzyme A synthetase 0.36 Atu1444 nitrogen regulation protein low > 89
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS15200 acetate--CoA ligase 0.57 ABZR86_RS11525 tRNA dihydrouridine synthase DusB low > 74
Rhizobium sp. OAE497 0.64 ABIE40_RS19160 acetate--CoA ligase 0.35 ABIE40_RS09080 tRNA dihydrouridine synthase DusB low > 107
Shewanella loihica PV-4 0.64 Shew_1533 acetyl-CoA synthetase (RefSeq) 0.60 Shew_0330 nifR3 family TIM-barrel protein (RefSeq) low > 60
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_3572 acetyl-coenzyme A synthetase 0.62 Psyr_4404 tRNA-U20-dihydrouridine synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_3572 acetyl-coenzyme A synthetase 0.62 Psyr_4404 tRNA-U20-dihydrouridine synthase low > 86
Alteromonas macleodii MIT1002 0.63 MIT1002_03516 Acetyl-coenzyme A synthetase 0.68 MIT1002_03957 putative tRNA-dihydrouridine synthase low > 70
Brevundimonas sp. GW460-12-10-14-LB2 0.63 A4249_RS15190 acetate--CoA ligase 0.33 A4249_RS04810 tRNA dihydrouridine synthase DusB low > 48
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_03971 Acetyl-coenzyme A synthetase 0.55 OHPLBJKB_00445 putative tRNA-dihydrouridine synthase low > 73
Lysobacter sp. OAE881 0.63 ABIE51_RS01660 acetate--CoA ligase 0.57 ABIE51_RS16450 tRNA dihydrouridine synthase DusB low > 62
Escherichia coli ECOR27 0.63 NOLOHH_05080 acs acetate--CoA ligase 0.64 NOLOHH_09470 dusB tRNA dihydrouridine synthase DusB low > 57
Escherichia coli ECOR38 0.63 HEPCGN_11455 acs acetate--CoA ligase 0.64 HEPCGN_16505 dusB tRNA dihydrouridine synthase DusB low > 85
Shewanella sp. ANA-3 0.63 Shewana3_2523 acetyl-CoA synthetase (RefSeq) 0.62 Shewana3_0399 nifR3 family TIM-barrel protein (RefSeq) low > 73
Escherichia coli ECRC62 0.63 BNILDI_06445 acs acetate--CoA ligase 0.64 BNILDI_02050 dusB tRNA dihydrouridine synthase DusB — —
Shewanella amazonensis SB2B 0.63 Sama_2079 acetyl-CoA synthetase (RefSeq) 0.64 Sama_3225 tRNA-dihydrouridine synthase B (RefSeq) low > 62
Escherichia coli Nissle 1917 0.63 ECOLIN_RS23550 acetate--CoA ligase 0.64 ECOLIN_RS18725 tRNA dihydrouridine synthase DusB low > 52
Escherichia coli BW25113 0.63 b4069 acs acetyl-coenzyme A synthetase (NCBI) 0.64 b3260 dusB tRNA-dihydrouridine synthase B (NCBI) low > 76
Escherichia fergusonii Becca 0.63 EFB2_04520 Acetyl-coenzyme A synthetase 0.64 EFB2_00564 tRNA-dihydrouridine synthase B low > 86
Escherichia coli BL21 0.63 ECD_03941 acetyl-CoA synthetase 0.64 ECD_03118 tRNA-dihydrouridine synthase B low > 60
Acinetobacter radioresistens SK82 0.63 MPMX26_02906 Acetyl-coenzyme A synthetase 0.56 MPMX26_02127 tRNA-dihydrouridine synthase B low > 36
Enterobacter sp. TBS_079 0.63 MPMX20_00291 Acetyl-coenzyme A synthetase 0.64 MPMX20_04169 tRNA-dihydrouridine synthase B low > 85
Shewanella oneidensis MR-1 0.62 SO2743 acs acetyl-coenzyme A synthetase (NCBI ptt file) 0.63 SO0394 conserved hypothetical protein (NCBI ptt file) low > 76
Escherichia coli ECRC99 0.62 KEDOAH_15320 acs acetate--CoA ligase 0.56 KEDOAH_10465 dusB tRNA dihydrouridine synthase DusB — —
Escherichia coli ECRC98 0.62 JDDGAC_16465 acs acetate--CoA ligase 0.56 JDDGAC_21310 dusB tRNA dihydrouridine synthase DusB — —
Rhodanobacter denitrificans MT42 0.62 LRK55_RS08185 acetate--CoA ligase 0.58 LRK55_RS11875 tRNA dihydrouridine synthase DusB low > 63
Pectobacterium carotovorum WPP14 0.62 HER17_RS17630 acetate--CoA ligase 0.63 HER17_RS20235 tRNA dihydrouridine synthase DusB low > 75
Rhodanobacter denitrificans FW104-10B01 0.62 LRK54_RS08420 acetate--CoA ligase 0.58 LRK54_RS12140 tRNA dihydrouridine synthase DusB low > 59
Escherichia coli ECRC101 0.62 OKFHMN_12830 acs acetate--CoA ligase 0.64 OKFHMN_17685 dusB tRNA dihydrouridine synthase DusB — —
Escherichia coli ECRC101 0.62 MCAODC_03340 acs acetate--CoA ligase 0.64 MCAODC_08205 dusB tRNA dihydrouridine synthase DusB — —
Escherichia coli ECRC102 0.62 NIAGMN_10675 acs acetate--CoA ligase 0.64 NIAGMN_15445 dusB tRNA dihydrouridine synthase DusB — —
Enterobacter asburiae PDN3 0.62 EX28DRAFT_4232 acetate--CoA ligase 0.63 EX28DRAFT_3313 putative TIM-barrel protein, nifR3 family low > 76
Rhodanobacter sp. FW510-T8 0.62 OKGIIK_15190 acs acetate--CoA ligase 0.58 OKGIIK_11770 dusB tRNA dihydrouridine synthase DusB low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.62 GFF1452 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.54 GFF2124 tRNA dihydrouridine synthase B (EC 1.-.-.-) low > 78
Rahnella sp. WP5 0.62 EX31_RS09040 acetate--CoA ligase 0.65 EX31_RS12180 tRNA dihydrouridine synthase DusB low > 89
Klebsiella michiganensis M5al 0.62 BWI76_RS02095 acetyl-coenzyme A synthetase 0.64 BWI76_RS25565 tRNA dihydrouridine synthase DusB — —
Dickeya dadantii 3937 0.62 DDA3937_RS03480 acetate--CoA ligase 0.63 DDA3937_RS01375 tRNA dihydrouridine synthase DusB 0.66 11
Caulobacter crescentus NA1000 0.62 CCNA_03696 acetyl-coenzyme A synthetase 0.30 CCNA_01813 tRNA-dihydrouridine synthase low > 66
Caulobacter crescentus NA1000 Δfur 0.62 CCNA_03696 acetyl-coenzyme A synthetase 0.30 CCNA_01813 tRNA-dihydrouridine synthase low > 67
Dickeya dianthicola ME23 0.61 DZA65_RS03695 acetate--CoA ligase 0.63 DZA65_RS01355 tRNA dihydrouridine synthase DusB low > 75
Dickeya dianthicola 67-19 0.61 HGI48_RS03580 acetate--CoA ligase 0.63 HGI48_RS01295 tRNA dihydrouridine synthase DusB low > 71
Dinoroseobacter shibae DFL-12 0.61 Dshi_3553 acetate--CoA ligase (RefSeq) 0.33 Dshi_1576 putative TIM-barrel protein, nifR3 family (RefSeq) — —
Serratia liquefaciens MT49 0.61 IAI46_01405 acetate--CoA ligase 0.64 IAI46_22775 tRNA dihydrouridine synthase DusB low > 86
Sphingomonas koreensis DSMZ 15582 0.61 Ga0059261_1313 acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.41 Ga0059261_0140 tRNA-U20-dihydrouridine synthase low > 68
Phaeobacter inhibens DSM 17395 0.61 PGA1_c12950 acetyl-coenzyme A synthetase Acs 0.36 PGA1_c14770 tRNA-dihydrouridine synthase DusB low > 62
Pseudomonas stutzeri RCH2 0.60 Psest_2657 acetate--CoA ligase 0.64 Psest_1016 putative TIM-barrel protein, nifR3 family low > 67
Pantoea sp. MT58 0.60 IAI47_17715 acetate--CoA ligase 0.62 IAI47_02385 tRNA dihydrouridine synthase DusB low > 76
Pedobacter sp. GW460-11-11-14-LB5 0.55 CA265_RS16340 acetate--CoA ligase 0.33 CA265_RS21125 tRNA dihydrouridine synthase DusB low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.55 ABZR88_RS15400 acetate--CoA ligase 0.33 ABZR88_RS22340 tRNA dihydrouridine synthase DusB low > 71
Desulfovibrio vulgaris Hildenborough JW710 0.54 DVU2969 acetoacetyl-CoA synthase (TIGR) 0.20 DVU0661 dihydrouridine synthase family protein (TIGR) low > 55
Echinicola vietnamensis KMM 6221, DSM 17526 0.54 Echvi_1268 acetate--CoA ligase 0.33 Echvi_1531 putative TIM-barrel protein, nifR3 family low > 79
Synechococcus elongatus PCC 7942 0.53 Synpcc7942_1352 acsA acetyl-CoA synthetase 0.26 Synpcc7942_0283 Dihydrouridine synthase TIM-barrel protein nifR3 low > 38
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF4107 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.51 GFF634 tRNA dihydrouridine synthase B (EC 1.-.-.-) low > 90
Castellaniella sp019104865 MT123 0.48 ABCV34_RS00680 acetate--CoA ligase 0.55 ABCV34_RS07960 tRNA dihydrouridine synthase DusB low > 48
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS02445 acetate--CoA ligase 0.58 RALBFv3_RS11695 tRNA dihydrouridine synthase DusB low > 76
Ralstonia solanacearum UW163 0.48 UW163_RS11280 acetate--CoA ligase 0.58 UW163_RS01890 tRNA dihydrouridine synthase DusB — —
Ralstonia solanacearum GMI1000 0.48 RS_RS09815 acetyl-coenzyme A synthetase 0.58 RS_RS02515 tRNA dihydrouridine synthase DusB low > 80
Variovorax sp. OAS795 0.48 ABID97_RS27430 acetate--CoA ligase 0.56 ABID97_RS24735 tRNA dihydrouridine synthase DusB low > 91
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS14360 acetate--CoA ligase 0.59 ABZR87_RS07650 tRNA dihydrouridine synthase DusB low > 80
Ralstonia solanacearum PSI07 0.47 RPSI07_RS14880 acetate--CoA ligase 0.59 RPSI07_RS21520 tRNA dihydrouridine synthase DusB low > 81
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS13880 AMP-dependent synthetase 0.56 RR42_RS02730 tRNA-dihydrouridine synthase B 0.29 51
Acidovorax sp. GW101-3H11 0.47 Ac3H11_951 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.51 Ac3H11_3996 tRNA dihydrouridine synthase B (EC 1.-.-.-) low > 79
Dechlorosoma suillum PS 0.47 Dsui_2003 acetate--CoA ligase 0.57 Dsui_1593 putative TIM-barrel protein, nifR3 family low > 51
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS07770 acetyl-CoA synthetase 0.56 HSERO_RS02050 tRNA-dihydrouridine synthase B low > 78
Variovorax sp. SCN45 0.46 GFF475 Acetyl-CoA synthetase (EC 6.2.1.1) 0.55 GFF2144 tRNA-dihydrouridine synthase DusB low > 127
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04953 acetyl-coenzyme A synthetase 0.58 H281DRAFT_04249 tRNA-U20-dihydrouridine synthase low > 103
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS07000 acetyl-CoA synthetase 0.56 BPHYT_RS16585 tRNA-dihydrouridine synthase B low > 109
Paraburkholderia graminis OAS925 0.46 ABIE53_001664 acetyl-CoA synthetase 0.56 ABIE53_003489 tRNA-dihydrouridine synthase B low > 113
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS23765 acetate--CoA ligase 0.57 QEN71_RS26770 tRNA dihydrouridine synthase DusB low > 153
Mycobacterium tuberculosis H37Rv 0.43 Rv3667 Acetyl-coenzyme A synthetase Acs (acetate--CoA ligase) (acetyl-CoA synthetase) (acetyl-CoA synthase) (acyl-activating enzyme) (acetate thiokinase) (acetyl-activating enzyme) (acetate--coenzyme A ligase) (acetyl-coenzyme A synthase) 0.28 Rv0823c Possible transcriptional regulatory protein low > 58

Not shown: 6 genomes with orthologs for B158DRAFT_0063 only; 8 genomes with orthologs for B158DRAFT_0164 only