Conservation of cofitness between Atu1464 and Atu3754 in Agrobacterium fabrum C58

92 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1464 glycine cleavage system T protein, aminomethyltransferase 1.0 Atu3754 phosphoribosylaminoimidazole carboxylase catalytic subunit 0.73 17
Rhizobium sp. OAE497 0.81 ABIE40_RS09940 glycine cleavage system aminomethyltransferase GcvT 0.77 ABIE40_RS16065 5-(carboxyamino)imidazole ribonucleotide mutase
Sinorhizobium meliloti 1021 0.76 SMc02047 glycine cleavage system aminomethyltransferase T 0.75 SMc04001 phosphoribosylaminoimidazole carboxylase catalytic subunit protein 0.40 96
Rhodopseudomonas palustris CGA009 0.68 TX73_019925 glycine cleavage system aminomethyltransferase GcvT 0.64 TX73_021640 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_1095 Glycine cleavage system T protein 0.55 Psyr_5048 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_1095 Glycine cleavage system T protein 0.55 Psyr_5048 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas sp. RS175 0.56 PFR28_03385 Aminomethyltransferase 0.56 PFR28_04496 N5-carboxyaminoimidazole ribonucleotide mutase
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_18160 glycine cleavage system protein T 0.56 AO356_11080 N5-carboxyaminoimidazole ribonucleotide mutase
Pseudomonas putida KT2440 0.55 PP_0986 aminomethyltransferase 0.54 PP_5336 N5-carboxyaminoimidazole ribonucleotide mutase
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_15350 glycine cleavage system aminomethyltransferase T 0.55 CSW01_00265 5-(carboxyamino)imidazole ribonucleotide mutase low > 62
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_5556 Aminomethyltransferase (EC 2.1.2.10) (from data) 0.48 Pf6N2E2_4082 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS24010 glycine cleavage system aminomethyltransferase GcvT 0.56 PFLU_RS29805 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas fluorescens SBW25 0.55 PFLU_RS24010 glycine cleavage system aminomethyltransferase GcvT 0.56 PFLU_RS29805 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas simiae WCS417 0.55 PS417_22370 Aminomethyltransferase (EC 2.1.2.10) (from data) 0.56 PS417_28120 N5-carboxyaminoimidazole ribonucleotide mutase
Rhodospirillum rubrum S1H 0.54 Rru_A3051 Glycine cleavage system T protein (NCBI) 0.60 Rru_A1050 Phosphoribosylaminoimidazole carboxylase (NCBI)
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_03510 glycine cleavage system protein T 0.56 AO353_09940 N5-carboxyaminoimidazole ribonucleotide mutase
Phaeobacter inhibens DSM 17395 0.53 PGA1_78p00290 aminomethyltransferase GcvT 0.54 PGA1_c24860 phosphoribosylaminoimidazole carboxylase catalytic subunit PurE
Azospirillum sp. SherDot2 0.53 MPMX19_01029 Aminomethyltransferase 0.70 MPMX19_01417 N5-carboxyaminoimidazole ribonucleotide mutase
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_623 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.56 Pf1N1B4_2027 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_1866 Aminomethyltransferase (EC 2.1.2.10) (from data) 0.56 PfGW456L13_746 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF5213 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.37 GFF2771 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Magnetospirillum magneticum AMB-1 0.52 AMB_RS03925 glycine cleavage system protein T 0.67 AMB_RS11145 5-(carboxyamino)imidazole ribonucleotide mutase
Azospirillum brasilense Sp245 0.52 AZOBR_RS10470 aminomethyltransferase 0.70 AZOBR_RS06145 N5-carboxyaminoimidazole ribonucleotide mutase
Variovorax sp. SCN45 0.49 GFF6476 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.43 GFF5512 N5-carboxyaminoimidazole ribonucleotide mutase (EC 5.4.99.18) low > 127
Bosea sp. OAE506 0.48 ABIE41_RS22930 glycine cleavage system aminomethyltransferase GcvT 0.68 ABIE41_RS09240 5-(carboxyamino)imidazole ribonucleotide mutase
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_03465 glycine cleavage system aminomethyltransferase T 0.67 CCNA_03393 phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit low > 67
Caulobacter crescentus NA1000 0.45 CCNA_03465 glycine cleavage system aminomethyltransferase T 0.67 CCNA_03393 phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS09325 glycine cleavage system aminomethyltransferase GcvT 0.66 A4249_RS08940 5-(carboxyamino)imidazole ribonucleotide mutase
Sphingomonas koreensis DSMZ 15582 0.42 Ga0059261_3256 glycine cleavage system T protein 0.63 Ga0059261_1427 phosphoribosylaminoimidazole carboxylase, PurE protein
Dinoroseobacter shibae DFL-12 0.40 Dshi_2682 glycine cleavage system T protein (RefSeq) 0.47 Dshi_0681 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq)
Pontibacter actiniarum KMM 6156, DSM 19842 0.29 CA264_00210 glycine cleavage system protein T 0.47 CA264_12595 5-(carboxyamino)imidazole ribonucleotide mutase
Pedobacter sp. GW460-11-11-14-LB5 0.28 CA265_RS23960 glycine cleavage system protein T 0.47 CA265_RS07740 5-(carboxyamino)imidazole ribonucleotide mutase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.28 ABZR88_RS21210 glycine cleavage system aminomethyltransferase GcvT 0.47 ABZR88_RS09285 5-(carboxyamino)imidazole ribonucleotide mutase
Echinicola vietnamensis KMM 6221, DSM 17526 0.28 Echvi_0091 glycine cleavage system T protein 0.46 Echvi_0885 phosphoribosylaminoimidazole carboxylase, PurE protein
Phocaeicola vulgatus CL09T03C04 0.26 HMPREF1058_RS04685 glycine cleavage system aminomethyltransferase GcvT 0.42 HMPREF1058_RS12490 5-(carboxyamino)imidazole ribonucleotide mutase low > 67
Desulfovibrio vulgaris Hildenborough JW710 0.26 DVU1684 gcvT glycine cleavage system T protein (TIGR) 0.34 DVU0487 purE phosphoribosylaminoimidazole carboxylase, catalytic subunit (TIGR)
Desulfovibrio vulgaris Miyazaki F 0.26 DvMF_0341 glycine cleavage system T protein (RefSeq) 0.35 DvMF_1723 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq) 0.28 14
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS18950 glycine cleavage system aminomethyltransferase GcvT 0.41 ABI39_RS04245 5-(carboxyamino)imidazole ribonucleotide mutase low > 72
Parabacteroides merdae CL09T00C40 0.26 HMPREF1078_RS10420 glycine cleavage system aminomethyltransferase GcvT 0.45 HMPREF1078_RS05935 5-(carboxyamino)imidazole ribonucleotide mutase low > 61
Pseudomonas sp. S08-1 0.25 OH686_11175 glycine cleavage system T protein 0.58 OH686_13375 N5-carboxyaminoimidazole ribonucleotide mutase
Bacteroides ovatus ATCC 8483 0.25 BACOVA_05378 aminomethyltransferase 0.43 BACOVA_01613 phosphoribosylaminoimidazole carboxylase, catalytic subunit
Bacteroides stercoris CC31F 0.25 HMPREF1181_RS13255 glycine cleavage system aminomethyltransferase GcvT 0.43 HMPREF1181_RS00940 5-(carboxyamino)imidazole ribonucleotide mutase low > 56
Dechlorosoma suillum PS 0.25 Dsui_2735 glycine cleavage system T protein 0.44 Dsui_0092 phosphoribosylaminoimidazole carboxylase, PurE protein
Shewanella loihica PV-4 0.25 Shew_3064 gcvT glycine cleavage system aminomethyltransferase T (RefSeq) 0.60 Shew_1248 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq)
Shewanella oneidensis MR-1 0.25 SO0779 gcvT glycine cleavage system T protein (NCBI ptt file) 0.54 SO3554 purE phosphoribosylaminoimidazole carboxylase, catalytic subunit (NCBI ptt file) low > 76
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS29205 glycine cleavage system aminomethyltransferase GcvT 0.42 QEN71_RS02445 5-(carboxyamino)imidazole ribonucleotide mutase
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS19320 glycine cleavage system protein T 0.42 BPHYT_RS16250 N5-carboxyaminoimidazole ribonucleotide mutase low > 109
Shewanella sp. ANA-3 0.25 Shewana3_3501 gcvT glycine cleavage system aminomethyltransferase T (RefSeq) 0.55 Shewana3_3155 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq) low > 73
Paraburkholderia graminis OAS925 0.24 ABIE53_000236 aminomethyltransferase 0.42 ABIE53_003424 5-(carboxyamino)imidazole ribonucleotide mutase
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS18875 glycine cleavage system aminomethyltransferase GcvT 0.53 ABZR86_RS09835 5-(carboxyamino)imidazole ribonucleotide mutase
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_02411 aminomethyltransferase 0.42 H281DRAFT_04186 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas stutzeri RCH2 0.24 Psest_0181 glycine cleavage system T protein 0.54 Psest_4069 phosphoribosylaminoimidazole carboxylase, PurE protein
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS05510 glycine cleavage system aminomethyltransferase GcvT 0.58 LRK54_RS13810 5-(carboxyamino)imidazole ribonucleotide mutase
Rhodanobacter denitrificans MT42 0.24 LRK55_RS05280 glycine cleavage system aminomethyltransferase GcvT 0.58 LRK55_RS13525 5-(carboxyamino)imidazole ribonucleotide mutase
Lysobacter sp. OAE881 0.24 ABIE51_RS16365 glycine cleavage system aminomethyltransferase GcvT 0.43 ABIE51_RS15395 5-(carboxyamino)imidazole ribonucleotide mutase
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_01305 gcvT glycine cleavage system aminomethyltransferase GcvT 0.56 OKGIIK_03045 purE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Escherichia fergusonii Becca 0.23 EFB2_00997 Aminomethyltransferase 0.51 EFB2_03539 N5-carboxyaminoimidazole ribonucleotide mutase low > 86
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS20060 glycine cleavage system protein T 0.38 RR42_RS03225 N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECRC99 0.23 KEDOAH_08620 gcvT glycine cleavage system aminomethyltransferase GcvT 0.51 KEDOAH_20135 purE N5-carboxyaminoimidazole ribonucleotide mutase
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_0543 glycine cleavage system T protein 0.57 B158DRAFT_0611 5-(carboxyamino)imidazole ribonucleotide mutase
Escherichia coli ECRC62 0.23 BNILDI_09970 gcvT glycine cleavage system aminomethyltransferase GcvT 0.51 BNILDI_22255 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECOR27 0.23 NOLOHH_11435 gcvT glycine cleavage system aminomethyltransferase GcvT 0.51 NOLOHH_00825 purE N5-carboxyaminoimidazole ribonucleotide mutase low > 57
Escherichia coli ECRC101 0.23 OKFHMN_19520 gcvT glycine cleavage system aminomethyltransferase GcvT 0.51 OKFHMN_07835 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECRC101 0.23 MCAODC_10040 gcvT glycine cleavage system aminomethyltransferase GcvT 0.51 MCAODC_27055 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_00810 Aminomethyltransferase 0.51 OHPLBJKB_03158 N5-carboxyaminoimidazole ribonucleotide mutase low > 73
Escherichia coli ECRC98 0.23 JDDGAC_23160 gcvT glycine cleavage system aminomethyltransferase GcvT 0.51 JDDGAC_11485 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli BL21 0.23 ECD_02737 aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex 0.51 ECD_00473 N5-carboxyaminoimidazole ribonucleotide mutase low > 60
Escherichia coli ECRC102 0.23 NIAGMN_17285 gcvT glycine cleavage system aminomethyltransferase GcvT 0.51 NIAGMN_05890 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli BW25113 0.23 b2905 gcvT glycine cleavage system aminomethyltransferase T (NCBI) 0.51 b0523 purE phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) low > 76
Shewanella amazonensis SB2B 0.23 Sama_2721 gcvT glycine cleavage system aminomethyltransferase T (RefSeq) 0.60 Sama_1064 phosphoribosylaminoimidazole carboxylase (RefSeq) low > 62
Enterobacter asburiae PDN3 0.23 EX28DRAFT_2957 glycine cleavage system T protein 0.49 EX28DRAFT_2459 phosphoribosylaminoimidazole carboxylase, PurE protein
Enterobacter sp. TBS_079 0.23 MPMX20_03764 Aminomethyltransferase 0.49 MPMX20_01098 N5-carboxyaminoimidazole ribonucleotide mutase low > 85
Escherichia coli Nissle 1917 0.23 ECOLIN_RS16175 glycine cleavage system aminomethyltransferase GcvT 0.51 ECOLIN_RS03030 5-(carboxyamino)imidazole ribonucleotide mutase
Escherichia coli ECOR38 0.23 HEPCGN_18810 gcvT glycine cleavage system aminomethyltransferase GcvT 0.51 HEPCGN_06475 purE N5-carboxyaminoimidazole ribonucleotide mutase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF3005 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.50 GFF4439 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) low > 78
Erwinia tracheiphila SCR3 0.22 LU632_RS05905 gcvT glycine cleavage system aminomethyltransferase GcvT 0.52 LU632_RS15245 purE 5-(carboxyamino)imidazole ribonucleotide mutase low > 74
Castellaniella sp019104865 MT123 0.22 ABCV34_RS08845 glycine cleavage system aminomethyltransferase GcvT 0.41 ABCV34_RS00560 5-(carboxyamino)imidazole ribonucleotide mutase
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.1567.1 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.42 Xcc-8004.2011.1 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) low > 74
Dickeya dadantii 3937 0.22 DDA3937_RS03245 glycine cleavage system aminomethyltransferase GcvT 0.51 DDA3937_RS15105 5-(carboxyamino)imidazole ribonucleotide mutase
Serratia liquefaciens MT49 0.22 IAI46_20860 glycine cleavage system aminomethyltransferase GcvT 0.49 IAI46_05375 5-(carboxyamino)imidazole ribonucleotide mutase low > 86
Dickeya dianthicola 67-19 0.22 HGI48_RS03390 glycine cleavage system aminomethyltransferase GcvT 0.50 HGI48_RS15185 5-(carboxyamino)imidazole ribonucleotide mutase low > 71
Dickeya dianthicola ME23 0.22 DZA65_RS03435 glycine cleavage system aminomethyltransferase GcvT 0.50 DZA65_RS15990 5-(carboxyamino)imidazole ribonucleotide mutase low > 75
Pantoea sp. MT58 0.22 IAI47_03765 glycine cleavage system aminomethyltransferase GcvT 0.52 IAI47_14350 5-(carboxyamino)imidazole ribonucleotide mutase low > 76
Rahnella sp. WP5 0.21 EX31_RS21510 glycine cleavage system aminomethyltransferase GcvT 0.49 EX31_RS22625 5-(carboxyamino)imidazole ribonucleotide mutase low > 89
Alteromonas macleodii MIT1002 0.21 MIT1002_02973 Aminomethyltransferase 0.46 MIT1002_00521 N5-carboxyaminoimidazole ribonucleotide mutase low > 70
Pectobacterium carotovorum WPP14 0.21 HER17_RS18005 glycine cleavage system aminomethyltransferase GcvT 0.51 HER17_RS06475 5-(carboxyamino)imidazole ribonucleotide mutase low > 75
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS03925 glycine cleavage system aminomethyltransferase GcvT 0.41 ABZR87_RS08085 5-(carboxyamino)imidazole ribonucleotide mutase
Klebsiella michiganensis M5al 0.21 BWI76_RS23880 Aminomethyltransferase (EC 2.1.2.10) (from data) 0.52 BWI76_RS07070 5-(carboxyamino)imidazole ribonucleotide mutase low > 92
Ralstonia solanacearum UW163 0.21 UW163_RS04960 glycine cleavage system protein T 0.44 UW163_RS01415 5-(carboxyamino)imidazole ribonucleotide mutase
Ralstonia solanacearum IBSBF1503 0.21 RALBFv3_RS08650 glycine cleavage system protein T 0.44 RALBFv3_RS12195 5-(carboxyamino)imidazole ribonucleotide mutase
Ralstonia solanacearum PSI07 0.21 RPSI07_RS08585 glycine cleavage system protein T 0.43 RPSI07_RS21135 5-(carboxyamino)imidazole ribonucleotide mutase
Ralstonia solanacearum GMI1000 0.21 RS_RS16500 aminomethyltransferase 0.44 RS_RS02880 5-(carboxyamino)imidazole ribonucleotide mutase
Mycobacterium tuberculosis H37Rv 0.21 Rv2211c Probable aminomethyltransferase GcvT (glycine cleavage system T protein) 0.46 Rv3275c Probable phosphoribosylaminoimidazole carboxylase catalytic subunit PurE (air carboxylase) (AIRC)

Not shown: 3 genomes with orthologs for Atu1464 only; 8 genomes with orthologs for Atu3754 only