| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Brevundimonas sp. GW460-12-10-14-LB2 | 1.0 | A4249_RS00510 | | DNA repair protein RadC | 1.0 | A4249_RS04755 | | TatD family hydrolase | 0.49 | 8 |
| Rhizobium sp. OAE497 | 0.50 | ABIE40_RS08620 | | DNA repair protein RadC | 0.45 | ABIE40_RS09480 | | TatD family hydrolase | low | > 107 |
| Bosea sp. OAE506 | 0.50 | ABIE41_RS13815 | | DNA repair protein RadC | 0.47 | ABIE41_RS15945 | | TatD family hydrolase | low | > 77 |
| Sinorhizobium meliloti 1021 | 0.48 | SMc00299 | | DNA repair protein RadC | 0.53 | SMc01193 | | hypothetical protein | low | > 103 |
| Azospirillum brasilense Sp245 | 0.46 | AZOBR_RS04400 | | DNA repair protein RadC | 0.51 | AZOBR_RS08795 | | LuxR family transcriptional regulator | low | > 97 |
| Phaeobacter inhibens DSM 17395 | 0.45 | PGA1_c34550 | | DNA repair protein RadC | 0.42 | PGA1_c07990 | | putative hydrolase, TatD family | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.44 | Dshi_3569 | | DNA repair protein RadC (RefSeq) | 0.38 | Dshi_0920 | | hydrolase, TatD family (RefSeq) | low | > 64 |
| Azospirillum sp. SherDot2 | 0.44 | MPMX19_00291 | | hypothetical protein | 0.53 | MPMX19_01469 | | putative metal-dependent hydrolase YcfH | low | > 112 |
| Rhodopseudomonas palustris CGA009 | 0.43 | TX73_002000 | | DNA repair protein RadC | 0.48 | TX73_014390 | | TatD family hydrolase | low | > 86 |
| Rhodospirillum rubrum S1H | 0.42 | Rru_A0732 | | DNA repair protein RadC (NCBI) | 0.54 | Rru_A1700 | | TatD-related deoxyribonuclease (NCBI) | low | > 58 |
| Sphingomonas koreensis DSMZ 15582 | 0.41 | Ga0059261_3175 | | DNA repair protein radc | 0.42 | Ga0059261_0126 | | hydrolase, TatD family | low | > 68 |
| Fusobacterium nucleatum SB010 | 0.30 | HUW76_05635 | | DNA repair protein RadC | 0.35 | HUW76_08855 | | TatD family hydrolase | low | > 35 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.29 | GFF1170 | | DNA repair protein RadC | 0.36 | GFF4665 | | Putative deoxyribonuclease YcfH | low | > 90 |
| Desulfovibrio vulgaris Miyazaki F | 0.28 | DvMF_3086 | | DNA repair protein RadC (RefSeq) | 0.32 | DvMF_2230 | | hydrolase, TatD family (RefSeq) | low | > 51 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.28 | DVU1193 | radC | DNA repair protein RadC (TIGR) | 0.28 | DVU3202 | | hydrolase, TatD family (TIGR) | low | > 55 |
| Pseudomonas fluorescens FW300-N1B4 | 0.27 | Pf1N1B4_2126 | | DNA repair protein RadC | 0.31 | Pf1N1B4_420 | | Putative deoxyribonuclease YcfH | low | > 87 |
| Klebsiella michiganensis M5al | 0.27 | BWI76_RS27365 | | hypothetical protein | 0.31 | BWI76_RS01335 | | DNase TatD | low | > 92 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.27 | Psyr_0222 | | DNA replication and repair protein RadC | 0.34 | Psyr_1655 | | TatD-related deoxyribonuclease | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.27 | Psyr_0222 | | DNA replication and repair protein RadC | 0.34 | Psyr_1655 | | TatD-related deoxyribonuclease | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.27 | AO356_12545 | | hypothetical protein | 0.33 | AO356_20205 | | hydrolase TatD | low | > 104 |
| Ralstonia solanacearum IBSBF1503 | 0.27 | RALBFv3_RS04710 | | JAB domain-containing protein | 0.37 | RALBFv3_RS01010 | | TatD family deoxyribonuclease | low | > 76 |
| Ralstonia solanacearum UW163 | 0.27 | UW163_RS08960 | | JAB domain-containing protein | 0.37 | UW163_RS14320 | | TatD family deoxyribonuclease | — | — |
| Ralstonia solanacearum GMI1000 | 0.26 | RS_RS12270 | | JAB domain-containing protein | 0.38 | RS_RS09020 | | TatD family deoxyribonuclease | low | > 80 |
| Dickeya dianthicola ME23 | 0.26 | DZA65_RS00755 | | JAB domain-containing protein | 0.31 | DZA65_RS13620 | | metal-dependent hydrolase | low | > 75 |
| Pseudomonas stutzeri RCH2 | 0.26 | Psest_3803 | | DNA repair protein radc | 0.33 | Psest_1696 | | hydrolase, TatD family | low | > 67 |
| Ralstonia sp. UNC404CL21Col | 0.26 | ABZR87_RS00330 | | DNA repair protein RadC | 0.37 | ABZR87_RS12460 | | TatD family hydrolase | 0.41 | 67 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.26 | H281DRAFT_04066 | | DNA replication and repair protein RadC | 0.32 | H281DRAFT_00931 | | TatD DNase family protein | low | > 103 |
| Dickeya dianthicola 67-19 | 0.26 | HGI48_RS00700 | | DNA repair protein RadC | 0.31 | HGI48_RS13150 | | metal-dependent hydrolase | low | > 71 |
| Pseudomonas fluorescens SBW25 | 0.26 | PFLU_RS29445 | | JAB domain-containing protein | 0.35 | PFLU_RS23020 | | TatD family hydrolase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.26 | PFLU_RS29445 | | JAB domain-containing protein | 0.35 | PFLU_RS23020 | | TatD family hydrolase | low | > 109 |
| Ralstonia solanacearum PSI07 | 0.26 | RPSI07_RS12675 | | JAB domain-containing protein | 0.36 | RPSI07_RS16465 | | TatD family deoxyribonuclease | low | > 81 |
| Pseudomonas fluorescens FW300-N2E2 | 0.26 | Pf6N2E2_4377 | | DNA repair protein RadC | 0.34 | Pf6N2E2_5960 | | Putative deoxyribonuclease YcfH | low | > 103 |
| Pseudomonas simiae WCS417 | 0.26 | PS417_27770 | | hypothetical protein | 0.35 | PS417_21405 | | hydrolase TatD | low | > 88 |
| Paraburkholderia sabiae LMG 24235 | 0.26 | QEN71_RS03085 | | DNA repair protein RadC | 0.33 | QEN71_RS21805 | | TatD family hydrolase | 0.62 | 74 |
| Pseudomonas fluorescens FW300-N2E3 | 0.26 | AO353_09220 | | hypothetical protein | 0.35 | AO353_01325 | | hydrolase TatD | low | > 101 |
| Herbaspirillum seropedicae SmR1 | 0.26 | HSERO_RS05945 | | hypothetical protein | 0.37 | HSERO_RS12995 | | DNAase | low | > 78 |
| Paraburkholderia graminis OAS925 | 0.26 | ABIE53_003289 | | DNA repair protein RadC | 0.33 | ABIE53_002166 | | TatD DNase family protein | low | > 113 |
| Dickeya dadantii 3937 | 0.26 | DDA3937_RS20515 | | DNA repair protein RadC | 0.32 | DDA3937_RS13085 | | metal-dependent hydrolase | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.26 | HER17_RS20830 | | DNA repair protein RadC | 0.30 | HER17_RS08685 | | metal-dependent hydrolase | low | > 75 |
| Serratia liquefaciens MT49 | 0.25 | IAI46_24825 | | DNA repair protein RadC | 0.32 | IAI46_09825 | | metal-dependent hydrolase | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.25 | OHPLBJKB_00064 | | hypothetical protein | 0.29 | OHPLBJKB_02566 | | putative metal-dependent hydrolase YcfH | low | > 73 |
| Burkholderia phytofirmans PsJN | 0.25 | BPHYT_RS15625 | | hypothetical protein | 0.32 | BPHYT_RS09640 | | DNAase | low | > 109 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.25 | GFF371 | | DNA repair protein RadC | 0.29 | GFF3382 | | Putative deoxyribonuclease YcfH | low | > 78 |
| Escherichia coli BL21 | 0.25 | ECD_03495 | | UPF0758 family protein | 0.29 | ECD_01096 | | putative DNase | low | > 61 |
| Escherichia coli BW25113 | 0.25 | b3638 | radC | DNA repair protein (VIMSS) | 0.29 | b1100 | ycfH | predicted metallodependent hydrolase (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.25 | BNILDI_04015 | radC | DNA repair protein RadC | 0.29 | BNILDI_19230 | ycfH | metal-dependent hydrolase | low | > 75 |
| Cupriavidus basilensis FW507-4G11 | 0.25 | RR42_RS16995 | | hypothetical protein | 0.33 | RR42_RS10885 | | DNAase | low | > 128 |
| Escherichia coli ECRC100 | 0.25 | OKFHMN_15620 | radC | DNA repair protein RadC | 0.29 | OKFHMN_03540 | ycfH | metal-dependent hydrolase | low | > 80 |
| Escherichia coli ECRC98 | 0.25 | JDDGAC_19245 | radC | DNA repair protein RadC | 0.29 | JDDGAC_07200 | ycfH | metal-dependent hydrolase | low | > 86 |
| Escherichia coli ECOR38 | 0.25 | HEPCGN_14445 | radC | DNA repair protein RadC | 0.29 | HEPCGN_23940 | ycfH | metal-dependent hydrolase | low | > 87 |
| Escherichia coli Nissle 1917 | 0.25 | ECOLIN_RS20730 | | DNA repair protein RadC | 0.29 | ECOLIN_RS06350 | | metal-dependent hydrolase | low | > 55 |
| Dechlorosoma suillum PS | 0.25 | Dsui_1537 | | DNA repair protein radc | 0.35 | Dsui_2652 | | hydrolase, TatD family | low | > 51 |
| Escherichia coli ECRC102 | 0.25 | NIAGMN_13380 | radC | DNA repair protein RadC | 0.29 | NIAGMN_24290 | ycfH | metal-dependent hydrolase | — | — |
| Escherichia coli ECRC99 | 0.25 | KEDOAH_12530 | radC | DNA repair protein RadC | 0.29 | KEDOAH_24215 | ycfH | metal-dependent hydrolase | — | — |
| Escherichia fergusonii Becca | 0.25 | EFB2_00175 | | hypothetical protein | 0.29 | EFB2_02875 | | putative metal-dependent hydrolase YcfH | low | > 86 |
| Escherichia coli ECOR27 | 0.25 | NOLOHH_07500 | radC | DNA repair protein RadC | 0.29 | NOLOHH_21070 | ycfH | metal-dependent hydrolase | — | — |
| Escherichia coli ECRC101 | 0.25 | MCAODC_06130 | radC | DNA repair protein RadC | 0.29 | MCAODC_22900 | ycfH | metal-dependent hydrolase | low | > 87 |
| Pseudomonas sp. RS175 | 0.25 | PFR28_04412 | | hypothetical protein | 0.33 | PFR28_03002 | | putative metal-dependent hydrolase YcfH | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.25 | PfGW456L13_798 | | DNA repair protein RadC | 0.32 | PfGW456L13_2112 | | Putative deoxyribonuclease YcfH | low | > 87 |
| Rahnella sp. WP5 | 0.24 | EX31_RS14470 | | JAB domain-containing protein | 0.34 | EX31_RS24470 | | metal-dependent hydrolase | low | > 89 |
| Enterobacter asburiae PDN3 | 0.24 | EX28DRAFT_3888 | | DNA repair protein radc | 0.30 | EX28DRAFT_1829 | | hydrolase, TatD family | low | > 76 |
| Pseudomonas putida KT2440 | 0.24 | PP_5284 | | UPF0758 protein PP_5284 | 0.33 | PP_1967 | | tRNA D-aminoacylase | low | > 96 |
| Enterobacter sp. TBS_079 | 0.24 | MPMX20_00097 | | hypothetical protein | 0.30 | MPMX20_01780 | | putative metal-dependent hydrolase YcfH | low | > 85 |
| Alteromonas macleodii MIT1002 | 0.24 | MIT1002_00049 | | DNA repair protein RadC | 0.33 | MIT1002_01740 | | putative deoxyribonuclease YcfH | low | > 70 |
| Erwinia tracheiphila SCR3 | 0.24 | LU632_RS21995 | radC | DNA repair protein RadC | 0.34 | LU632_RS14785 | | metal-dependent hydrolase | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.24 | ABZR86_RS15615 | | DNA repair protein RadC | 0.26 | ABZR86_RS13140 | | TatD family hydrolase | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.24 | CSW01_01155 | | DNA repair protein RadC | 0.33 | CSW01_10060 | | YchF/TatD family DNA exonuclease | low | > 62 |
| Shewanella amazonensis SB2B | 0.23 | Sama_0327 | radC | DNA repair protein RadC (RefSeq) | 0.36 | Sama_2040 | | TatD family hydrolase (RefSeq) | low | > 62 |
| Marinobacter adhaerens HP15 | 0.23 | HP15_3321 | | DNA repair protein RadC-like protein | 0.28 | HP15_3420 | | hydrolase, TatD family | low | > 73 |
| Pantoea sp. MT58 | 0.23 | IAI47_00620 | | DNA repair protein RadC | 0.31 | IAI47_12035 | | metal-dependent hydrolase | low | > 76 |
| Rhodanobacter sp. FW510-T8 | 0.23 | OKGIIK_15660 | radC | DNA repair protein RadC | 0.30 | OKGIIK_16210 | tatD | 3'->5' ssDNA/RNA exonuclease TatD | low | > 52 |
| Pseudomonas sp. S08-1 | 0.23 | OH686_13620 | | UPF0758 family protein | 0.33 | OH686_22180 | | Uncharacterized metal-dependent hydrolase YcfH | low | > 80 |
| Variovorax sp. OAS795 | 0.23 | ABID97_RS07700 | | DNA repair protein RadC | 0.34 | ABID97_RS16000 | | TatD family hydrolase | low | > 91 |
| Kangiella aquimarina DSM 16071 | 0.23 | B158DRAFT_0781 | | DNA repair protein radc | 0.36 | B158DRAFT_1745 | | hydrolase, TatD family | low | > 40 |
| Shewanella loihica PV-4 | 0.22 | Shew_3481 | | DNA repair protein RadC (RefSeq) | 0.35 | Shew_1582 | | TatD family hydrolase (RefSeq) | low | > 60 |
| Variovorax sp. SCN45 | 0.22 | GFF5700 | | UPF0758 family protein | 0.35 | GFF34 | | Uncharacterized metal-dependent hydrolase YcfH | low | > 127 |
| Rhodanobacter denitrificans MT42 | 0.21 | LRK55_RS08695 | | DNA repair protein RadC | 0.29 | LRK55_RS09595 | | TatD family hydrolase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.21 | LRK54_RS09165 | | DNA repair protein RadC | 0.28 | LRK54_RS09955 | | TatD family hydrolase | low | > 59 |
| Castellaniella sp019104865 MT123 | 0.21 | ABCV34_RS00910 | | DNA repair protein RadC | 0.36 | ABCV34_RS03960 | | TatD family hydrolase | low | > 48 |
| Shewanella oneidensis MR-1 | 0.20 | SO4248 | radC | DNA repair protein RadC (NCBI ptt file) | 0.35 | SO2610 | | hydrolase, TatD family (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.20 | Shewana3_3770 | radC | DNA repair protein RadC (RefSeq) | 0.35 | Shewana3_1769 | | TatD family hydrolase (RefSeq) | low | > 73 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.19 | Xcc-8004.4897.1 | | DNA repair protein RadC | 0.27 | Xcc-8004.384.1 | | Deoxyribonuclease TatD | low | > 74 |
| Acidovorax sp. GW101-3H11 | 0.19 | Ac3H11_1774 | | DNA repair protein RadC | 0.34 | Ac3H11_2488 | | Putative deoxyribonuclease YcfH | low | > 79 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.19 | CA264_13835 | | hypothetical protein | 0.23 | CA264_03915 | | hydrolase TatD | low | > 74 |
| Acinetobacter radioresistens SK82 | 0.18 | MPMX26_02636 | | hypothetical protein | 0.31 | MPMX26_01224 | | putative metal-dependent hydrolase YcfH | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.17 | ABZR88_RS01715 | | DNA repair protein RadC | 0.22 | ABZR88_RS21615 | | TatD family hydrolase | low | > 71 |
| Synechococcus elongatus PCC 7942 | 0.17 | Synpcc7942_1227 | radC | DNA repair protein RadC | 0.29 | Synpcc7942_1521 | tatD | Sec-independent protein translocase TatD | low | > 38 |
| Lysobacter sp. OAE881 | 0.17 | ABIE51_RS00095 | | DNA repair protein RadC | 0.26 | ABIE51_RS00680 | | TatD family hydrolase | low | > 62 |
| Bacteroides ovatus ATCC 8483 | 0.15 | BACOVA_03503 | | DNA repair protein RadC | 0.26 | BACOVA_00646 | | hydrolase, TatD family | low | > 94 |
| Parabacteroides merdae CL09T00C40 | 0.14 | HMPREF1078_RS04930 | | DNA repair protein RadC | 0.24 | HMPREF1078_RS11120 | | TatD family hydrolase | low | > 61 |
| Phocaeicola dorei CL03T12C01 | 0.14 | ABI39_RS02750 | | DNA repair protein RadC | 0.26 | ABI39_RS09860 | | TatD family hydrolase | low | > 72 |
Not shown: 0 genomes with orthologs for A4249_RS00510 only; 13 genomes with orthologs for A4249_RS04755 only