Conservation of cofitness between Sama_1074 and Sama_1856 in Shewanella amazonensis SB2B

92 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_1074 response regulator receiver protein (RefSeq) 1.0 Sama_1856 thiG thiazole synthase (RefSeq) 0.26 20
Shewanella sp. ANA-3 0.96 Shewana3_2879 two component transcriptional regulator (RefSeq) 0.71 Shewana3_1940 thiG thiazole synthase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.96 SO1558 phoB phosphate regulon response regulator PhoB (NCBI ptt file) 0.69 SO2441 thiG thiG protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.93 Shew_2749 two component transcriptional regulator (RefSeq) 0.67 Shew_2092 thiazole biosynthesis family protein (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.81 CSW01_03760 phosphate regulon transcriptional regulatory protein PhoB 0.65 CSW01_00355 thiazole synthase low > 62
Rahnella sp. WP5 0.81 EX31_RS22040 phosphate response regulator transcription factor PhoB 0.68 EX31_RS16795 thiazole synthase low > 89
Escherichia coli BL21 0.80 ECD_00347 response regulator in two-component regulatory system with PhoR 0.65 ECD_03867 thiamine biosynthesis ThiGH complex subunit low > 60
Escherichia coli ECRC101 0.80 MCAODC_27770 phoB phosphate response regulator transcription factor PhoB 0.66 MCAODC_03895 thiG thiazole synthase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_03277 Phosphate regulon transcriptional regulatory protein PhoB 0.66 OHPLBJKB_04060 Thiazole synthase low > 73
Escherichia coli BW25113 0.80 b0399 phoB DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) (NCBI) 0.66 b3991 thiG thiamin biosynthesis, thiazole moiety (VIMSS) low > 76
Escherichia coli ECRC98 0.80 JDDGAC_12200 phoB phosphate response regulator transcription factor PhoB 0.66 JDDGAC_17020 thiG thiazole synthase
Escherichia fergusonii Becca 0.80 EFB2_03658 Phosphate regulon transcriptional regulatory protein PhoB 0.65 EFB2_04621 Thiazole synthase low > 86
Enterobacter sp. TBS_079 0.80 MPMX20_00986 Phosphate regulon transcriptional regulatory protein PhoB 0.65 MPMX20_00213 Thiazole synthase low > 85
Escherichia coli ECRC101 0.80 OKFHMN_08545 phoB phosphate response regulator transcription factor PhoB 0.66 OKFHMN_13395 thiG thiazole synthase
Escherichia coli ECOR38 0.80 HEPCGN_07185 phoB phosphate response regulator transcription factor PhoB 0.65 HEPCGN_12030 thiG thiazole synthase low > 85
Escherichia coli ECRC62 0.80 BNILDI_22890 phoB phosphate response regulator transcription factor PhoB 0.66 BNILDI_05985 thiG thiazole synthase
Escherichia coli ECOR27 0.80 NOLOHH_01475 phoB phosphate response regulator transcription factor PhoB 0.66 NOLOHH_05540 thiG thiazole synthase low > 57
Escherichia coli ECRC102 0.80 NIAGMN_06600 phoB phosphate response regulator transcription factor PhoB 0.66 NIAGMN_11145 thiG thiazole synthase
Escherichia coli ECRC99 0.80 KEDOAH_19420 phoB phosphate response regulator transcription factor PhoB 0.66 KEDOAH_14765 thiG thiazole synthase
Enterobacter asburiae PDN3 0.80 EX28DRAFT_2575 phosphate regulon transcriptional regulatory protein PhoB 0.65 EX28DRAFT_4532 Uncharacterized enzyme of thiazole biosynthesis low > 76
Escherichia coli Nissle 1917 0.80 ECOLIN_RS02410 phosphate response regulator transcription factor PhoB 0.65 ECOLIN_RS23020 thiazole synthase low > 52
Klebsiella michiganensis M5al 0.79 BWI76_RS06230 DNA-binding response regulator 0.64 BWI76_RS01535 thiazole synthase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF4296 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 0.64 GFF4202 Thiazole biosynthesis protein ThiG low > 78
Serratia liquefaciens MT49 0.78 IAI46_04775 phosphate response regulator transcription factor PhoB 0.65 IAI46_01300 thiazole synthase low > 86
Alteromonas macleodii MIT1002 0.78 MIT1002_00751 Phosphate regulon transcriptional regulatory protein PhoB 0.59 MIT1002_00093 Thiazole synthase 0.65 12
Pectobacterium carotovorum WPP14 0.78 HER17_RS16040 phosphate response regulator transcription factor PhoB 0.66 HER17_RS20400 thiazole synthase low > 75
Dickeya dianthicola 67-19 0.77 HGI48_RS05485 phosphate response regulator transcription factor PhoB 0.66 HGI48_RS01150 thiazole synthase low > 71
Dickeya dianthicola ME23 0.77 DZA65_RS05810 phosphate response regulator transcription factor PhoB 0.67 DZA65_RS01195 thiazole synthase low > 75
Dickeya dadantii 3937 0.77 DDA3937_RS05425 phosphate response regulator transcription factor PhoB 0.67 DDA3937_RS01155 thiazole synthase low > 74
Pantoea sp. MT58 0.77 IAI47_14855 phosphate response regulator transcription factor PhoB 0.35 IAI47_20700 thiazole synthase low > 76
Erwinia tracheiphila SCR3 0.76 LU632_RS18925 phoB phosphate response regulator transcription factor PhoB 0.64 LU632_RS00950 thiazole synthase low > 74
Dechlorosoma suillum PS 0.66 Dsui_0863 phosphate regulon transcriptional regulatory protein PhoB 0.38 Dsui_1014 putative enzyme of thiazole biosynthesis
Acinetobacter radioresistens SK82 0.65 MPMX26_02958 Phosphate regulon transcriptional regulatory protein PhoB 0.37 MPMX26_01107 Thiazole synthase low > 36
Pseudomonas simiae WCS417 0.63 PS417_28035 transcriptional regulator PhoB 0.37 PS417_26775 thiazole synthase low > 88
Pseudomonas sp. RS175 0.63 PFR28_04479 Phosphate regulon transcriptional regulatory protein PhoB 0.37 PFR28_04252 Thiazole synthase low > 88
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_11000 phosphate regulon transcriptional regulatory protein PhoB 0.37 AO356_13375 thiazole synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_4066 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 0.37 Pf6N2E2_4590 Thiazole biosynthesis protein ThiG low > 103
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_09855 phosphate regulon transcriptional regulatory protein PhoB 0.37 AO353_08215 thiazole synthase low > 101
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS29725 phosphate regulon transcriptional regulatory protein PhoB 0.37 PFLU_RS28420 thiazole synthase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_5032 Response regulator receiver:Transcriptional regulatory protein, C-terminal 0.36 Psyr_4740 thiazole-phosphate synthase low > 86
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_2044 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 0.36 Pf1N1B4_2331 Thiazole biosynthesis protein ThiG low > 87
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_5032 Response regulator receiver:Transcriptional regulatory protein, C-terminal 0.36 Psyr_4740 thiazole-phosphate synthase low > 86
Pseudomonas fluorescens SBW25 0.63 PFLU_RS29725 phosphate regulon transcriptional regulatory protein PhoB 0.37 PFLU_RS28420 thiazole synthase low > 109
Marinobacter adhaerens HP15 0.63 HP15_3354 two component transcriptional regulator, winged helix family 0.42 HP15_3274 thiazole synthase
Pseudomonas fluorescens GW456-L13 0.63 PfGW456L13_762 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 0.38 PfGW456L13_1000 Thiazole biosynthesis protein ThiG low > 87
Pseudomonas stutzeri RCH2 0.62 Psest_3845 phosphate regulon transcriptional regulatory protein PhoB 0.37 Psest_0267 Uncharacterized enzyme of thiazole biosynthesis low > 67
Pseudomonas putida KT2440 0.62 PP_5320 two-component system DNA-binding transcriptional dual response regulator PhoB 0.35 PP_5104 thiazole synthase low > 96
Pseudomonas sp. S08-1 0.62 OH686_13465 phosphate regulon transcriptional regulatory protein PhoB 0.37 OH686_14285 Thiazole synthase low > 80
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS04845 phosphate regulon transcriptional regulator PhoB 0.39 QEN71_RS27930 thiazole synthase
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS14120 chemotaxis protein CheY 0.37 BPHYT_RS17775 thiazole synthase
Paraburkholderia graminis OAS925 0.61 ABIE53_002990 two-component system phosphate regulon response regulator PhoB 0.37 ABIE53_003714 thiazole synthase
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_04416 two component transcriptional regulator, winged helix family 0.37 H281DRAFT_05639 thiazole-phosphate synthase
Ralstonia solanacearum UW163 0.61 UW163_RS15435 phosphate regulon transcriptional regulatory protein PhoB 0.36 UW163_RS03655 thiazole synthase
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS02125 phosphate regulon transcriptional regulatory protein PhoB 0.36 RALBFv3_RS09925 thiazole synthase
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS14075 phosphate regulon transcriptional regulator PhoB 0.37 ABZR87_RS04800 thiazole synthase
Ralstonia solanacearum GMI1000 0.60 RS_RS07695 phosphate regulon transcriptional regulatory protein PhoB 0.38 RS_RS00535 thiazole synthase
Ralstonia solanacearum PSI07 0.60 RPSI07_RS15320 phosphate regulon transcriptional regulatory protein PhoB 0.38 RPSI07_RS23435 thiazole synthase
Cupriavidus basilensis FW507-4G11 0.60 RR42_RS13445 chemotaxis protein CheY 0.36 RR42_RS01305 thiazole synthase
Rhodanobacter sp. FW510-T8 0.60 OKGIIK_03790 phoB phosphate regulon transcriptional regulator PhoB 0.40 OKGIIK_11895 thiS thiazole synthase low > 52
Castellaniella sp019104865 MT123 0.60 ABCV34_RS14470 phosphate regulon transcriptional regulator PhoB 0.40 ABCV34_RS14510 thiazole synthase
Dyella japonica UNC79MFTsu3.2 0.59 ABZR86_RS00720 phosphate regulon transcriptional regulator PhoB 0.40 ABZR86_RS11645 thiazole synthase
Lysobacter sp. OAE881 0.58 ABIE51_RS14220 phosphate regulon transcriptional regulator PhoB 0.38 ABIE51_RS16545 thiazole synthase
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.4062.1 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 0.38 Xcc-8004.1284.1 Thiazole biosynthesis protein ThiG low > 74
Kangiella aquimarina DSM 16071 0.57 B158DRAFT_0895 phosphate regulon transcriptional regulatory protein PhoB 0.39 B158DRAFT_0291 thiazole-phosphate synthase low > 40
Acidovorax sp. GW101-3H11 0.54 Ac3H11_461 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 0.33 Ac3H11_1059 Thiazole biosynthesis protein ThiG
Variovorax sp. OAS795 0.53 ABID97_RS14620 phosphate regulon transcriptional regulator PhoB 0.37 ABID97_RS15315 thiazole synthase low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF63 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 0.35 GFF246 Thiazole biosynthesis protein ThiG
Variovorax sp. SCN45 0.53 GFF1097 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 0.34 GFF1188 Thiazole synthase (EC 2.8.1.10) low > 127
Azospirillum brasilense Sp245 0.52 AZOBR_RS01105 PhoB family transcriptional regulator 0.37 AZOBR_RS30960 thiazole synthase
Azospirillum sp. SherDot2 0.52 MPMX19_02587 Phosphate regulon transcriptional regulatory protein PhoB 0.41 MPMX19_00262 Thiazole synthase low > 112
Rhodopseudomonas palustris CGA009 0.51 TX73_024820 phosphate regulon transcriptional regulator PhoB 0.39 TX73_018530 thiazole synthase
Caulobacter crescentus NA1000 0.50 CCNA_00296 phosphate regulon response regulator PhoB 0.39 CCNA_01957 thiazole biosynthesis protein ThiG
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_00296 phosphate regulon response regulator PhoB 0.39 CCNA_01957 thiazole biosynthesis protein ThiG
Brevundimonas sp. GW460-12-10-14-LB2 0.50 A4249_RS08970 phosphate regulon transcriptional regulator PhoB 0.31 A4249_RS07975 thiazole synthase
Dinoroseobacter shibae DFL-12 0.50 Dshi_1538 two component transcriptional regulator, winged helix family (RefSeq) 0.29 Dshi_0912 thiazole biosynthesis family protein (RefSeq)
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS06335 chemotaxis protein CheY 0.38 HSERO_RS02130 thiazole synthase low > 78
Sinorhizobium meliloti 1021 0.49 SMc02140 phosphate regulon transcriptional regulatory protein 0.29 SM_b20617 thiazole synthase
Bosea sp. OAE506 0.49 ABIE41_RS08910 phosphate regulon transcriptional regulator PhoB 0.36 ABIE41_RS20185 thiazole synthase
Phaeobacter inhibens DSM 17395 0.49 PGA1_c15730 phosphate regulon transcriptional regulatory protein PhoB 0.33 PGA1_c09070 thiazole biosynthesis protein ThiG 0.26 22
Agrobacterium fabrum C58 0.49 Atu0425 two component response regulator 0.32 Atu2566 thiamin biosynthesis ThiG
Synechococcus elongatus PCC 7942 0.41 Synpcc7942_1012 sphR two component transcriptional regulator, winged helix family 0.43 Synpcc7942_0576 thiG thiazole synthase
Desulfovibrio vulgaris Miyazaki F 0.40 DvMF_0882 two component transcriptional regulator, winged helix family (RefSeq) 0.43 DvMF_0800 thiG thiazole synthase (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.38 DVU1083 phoB phosphate regulon transcriptional regulator PhoB (TIGR) 0.44 DVU2094 thiG thiG protein (TIGR)
Pontibacter actiniarum KMM 6156, DSM 19842 0.37 CA264_19685 DNA-binding response regulator 0.66 CA264_20420 thiazole synthase low > 74
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS21085 response regulator transcription factor 0.60 ABI39_RS17755 thiazole synthase low > 72
Echinicola vietnamensis KMM 6221, DSM 17526 0.36 Echvi_0046 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.62 Echvi_3564 Uncharacterized enzyme of thiazole biosynthesis low > 79
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS07210 response regulator transcription factor 0.59 HMPREF1058_RS03285 thiazole synthase low > 67
Bacteroides thetaiotaomicron VPI-5482 0.36 BT1482 two-component system response regulator (NCBI ptt file) 0.60 BT0651 thiamine biosynthesis protein ThiG (NCBI ptt file) low > 81
Mycobacterium tuberculosis H37Rv 0.35 Rv0491 Two component sensory transduction protein RegX3 (transcriptional regulatory protein) (probably LuxR-family) 0.37 Rv0417 Probable thiamin biosynthesis protein ThiG (thiazole biosynthesis protein)
Bacteroides ovatus ATCC 8483 0.35 BACOVA_04215 response regulator receiver domain protein 0.62 BACOVA_02359 thiazole biosynthesis protein ThiG low > 94
Bacteroides stercoris CC31F 0.35 HMPREF1181_RS04745 response regulator transcription factor 0.59 HMPREF1181_RS14680 thiazole synthase low > 56
Pedobacter sp. GW460-11-11-14-LB5 0.33 CA265_RS09180 DNA-binding response regulator 0.62 CA265_RS20180 thiazole synthase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.33 ABZR88_RS03105 response regulator transcription factor 0.62 ABZR88_RS08825 thiazole synthase low > 71

Not shown: 6 genomes with orthologs for Sama_1074 only; 2 genomes with orthologs for Sama_1856 only