| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Shewanella amazonensis SB2B | 1.0 | Sama_0857 | gltB | glutamate synthase subunit alpha (RefSeq) | 1.0 | Sama_0338 | leuD | isopropylmalate isomerase small subunit (RefSeq) | 0.85 | 12 |
| Shewanella oneidensis MR-1 | 0.89 | SO1325 | gltB | glutamate synthase, large subunit (NCBI ptt file) | 0.86 | SO4233 | leuD | 3-isopropylmalate dehydratase, small subunit (NCBI ptt file) | 0.89 | 11 |
| Shewanella sp. ANA-3 | 0.89 | Shewana3_3050 | gltB | glutamate synthase subunit alpha (RefSeq) | 0.84 | Shewana3_3758 | leuD | isopropylmalate isomerase small subunit (RefSeq) | 0.92 | 7 |
| Shewanella loihica PV-4 | 0.85 | Shew_1032 | gltB | glutamate synthase subunit alpha (RefSeq) | 0.81 | Shew_3469 | | isopropylmalate isomerase small subunit (RefSeq) | 0.97 | 29 |
| Serratia liquefaciens MT49 | 0.67 | IAI46_22345 | | glutamate synthase large subunit | 0.64 | IAI46_03340 | | 3-isopropylmalate dehydratase small subunit | low | > 86 |
| Vibrio cholerae E7946 ATCC 55056 | 0.67 | CSW01_12030 | | glutamate synthase large subunit | 0.64 | CSW01_12610 | | 3-isopropylmalate dehydratase small subunit | low | > 62 |
| Rahnella sp. WP5 | 0.67 | EX31_RS12515 | | glutamate synthase large subunit | 0.62 | EX31_RS03695 | | 3-isopropylmalate dehydratase small subunit | 0.96 | 28 |
| Pectobacterium carotovorum WPP14 | 0.67 | HER17_RS19910 | | glutamate synthase large subunit | 0.64 | HER17_RS03070 | | 3-isopropylmalate dehydratase small subunit | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.66 | LU632_RS21315 | gltB | glutamate synthase large subunit | 0.55 | LU632_RS02865 | leuD | 3-isopropylmalate dehydratase small subunit | low | > 74 |
| Alteromonas macleodii MIT1002 | 0.66 | MIT1002_03139 | | Glutamate synthase [NADPH] large chain precursor | 0.59 | MIT1002_00946 | | 3-isopropylmalate dehydratase small subunit 1 | 0.97 | 38 |
| Dickeya dianthicola 67-19 | 0.66 | HGI48_RS01560 | | glutamate synthase large subunit | 0.62 | HGI48_RS18070 | | 3-isopropylmalate dehydratase small subunit | 0.73 | 59 |
| Dickeya dadantii 3937 | 0.66 | DDA3937_RS01665 | | glutamate synthase large subunit | 0.63 | DDA3937_RS18130 | | 3-isopropylmalate dehydratase small subunit | low | > 74 |
| Dickeya dianthicola ME23 | 0.66 | DZA65_RS01635 | | glutamate synthase large subunit | 0.62 | DZA65_RS19215 | | 3-isopropylmalate dehydratase small subunit | 0.79 | 34 |
| Escherichia fergusonii Becca | 0.66 | EFB2_00611 | | Glutamate synthase [NADPH] large chain | 0.59 | EFB2_03974 | | 3-isopropylmalate dehydratase small subunit | low | > 86 |
| Escherichia coli Nissle 1917 | 0.66 | ECOLIN_RS18475 | | glutamate synthase large subunit | 0.59 | ECOLIN_RS00385 | | 3-isopropylmalate dehydratase small subunit | low | > 55 |
| Escherichia coli ECOR38 | 0.66 | HEPCGN_16760 | gltB3 | Glutamate synthase domain 3 | 0.59 | HEPCGN_08710 | leuD | 3-isopropylmalate dehydratase small subunit | 0.86 | 60 |
| Escherichia coli BL21 | 0.66 | ECD_03077 | | glutamate synthase, large subunit | 0.59 | ECD_00073 | | 3-isopropylmalate dehydratase small subunit | 0.58 | 48 |
| Escherichia coli BW25113 | 0.66 | b3212 | gltB | glutamate synthase, large subunit (NCBI) | 0.59 | b0071 | leuD | isopropylmalate isomerase small subunit (NCBI) | 0.54 | 20 |
| Escherichia coli ECRC62 | 0.66 | BNILDI_01850 | gltB | glutamate synthase large subunit | 0.59 | BNILDI_08535 | leuD | 3-isopropylmalate dehydratase small subunit | 0.89 | 61 |
| Escherichia coli ECRC100 | 0.66 | OKFHMN_17885 | gltB | glutamate synthase large subunit | 0.58 | OKFHMN_10730 | leuD | 3-isopropylmalate dehydratase small subunit | 0.88 | 57 |
| Escherichia coli ECRC98 | 0.66 | JDDGAC_21510 | gltB | glutamate synthase large subunit | 0.58 | JDDGAC_14325 | leuD | 3-isopropylmalate dehydratase small subunit | 0.88 | 45 |
| Klebsiella michiganensis M5al | 0.66 | BWI76_RS25315 | | glutamate synthase large subunit | 0.61 | BWI76_RS04665 | | 3-isopropylmalate dehydratase small subunit | 0.67 | 23 |
| Escherichia coli ECRC102 | 0.66 | NIAGMN_15645 | gltB | glutamate synthase large subunit | 0.58 | NIAGMN_08580 | leuD | 3-isopropylmalate dehydratase small subunit | — | — |
| Escherichia coli ECRC101 | 0.66 | MCAODC_08405 | gltB | glutamate synthase large subunit | 0.58 | MCAODC_01245 | leuD | 3-isopropylmalate dehydratase small subunit | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.66 | OHPLBJKB_00488 | | Glutamate synthase [NADPH] large chain | 0.59 | OHPLBJKB_03586 | | 3-isopropylmalate dehydratase small subunit | low | > 73 |
| Escherichia coli ECRC99 | 0.66 | KEDOAH_10265 | gltB | glutamate synthase large subunit | 0.58 | KEDOAH_17425 | leuD | 3-isopropylmalate dehydratase small subunit | — | — |
| Escherichia coli ECOR27 | 0.66 | NOLOHH_09685 | gltB | glutamate synthase large subunit | 0.59 | NOLOHH_03075 | leuD | 3-isopropylmalate dehydratase small subunit | 0.91 | 30 |
| Enterobacter sp. TBS_079 | 0.66 | MPMX20_04126 | | Glutamate synthase [NADPH] large chain | 0.61 | MPMX20_00766 | | 3-isopropylmalate dehydratase small subunit 1 | 0.67 | 23 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.66 | GFF2956 | | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | 0.61 | GFF167 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.66 | EX28DRAFT_3275 | | Glutamate synthase domain 2 | 0.62 | EX28DRAFT_3667 | | 3-isopropylmalate dehydratase, small subunit | 0.71 | 27 |
| Pseudomonas sp. S08-1 | 0.59 | OH686_10005 | | Glutamate synthase [NADPH] large chain | 0.54 | OH686_04475 | | 3-isopropylmalate dehydratase small subunit | 0.80 | 24 |
| Pseudomonas stutzeri RCH2 | 0.58 | Psest_3711 | | Glutamate synthase domain 2 | 0.55 | Psest_2590 | | 3-isopropylmalate dehydratase, small subunit | low | > 67 |
| Pseudomonas fluorescens FW300-N2E2 | 0.58 | Pf6N2E2_3752 | | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | 0.52 | Pf6N2E2_64 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.79 | 5 |
| Marinobacter adhaerens HP15 | 0.58 | HP15_482 | | glutamate synthase subunit alpha | 0.52 | HP15_1833 | | isopropylmalate isomerase small subunit | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.58 | AO356_09375 | | glutamate synthase | 0.52 | AO356_21405 | | 3-isopropylmalate dehydratase | 0.74 | 12 |
| Pseudomonas sp. RS175 | 0.58 | PFR28_05015 | | Glutamate synthase [NADPH] large chain | 0.52 | PFR28_02823 | | 3-isopropylmalate dehydratase small subunit 1 | 0.31 | 38 |
| Pseudomonas fluorescens GW456-L13 | 0.58 | PfGW456L13_272 | | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | 0.52 | PfGW456L13_3947 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.37 | 71 |
| Pseudomonas fluorescens FW300-N2E3 | 0.58 | AO353_12515 | | glutamate synthase | 0.52 | AO353_20625 | | 3-isopropylmalate dehydratase | 0.78 | 12 |
| Pseudomonas syringae pv. syringae B728a | 0.58 | Psyr_0411 | | glutamate synthase (NADPH) large subunit | 0.53 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | 0.70 | 23 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.58 | Psyr_0411 | | glutamate synthase (NADPH) large subunit | 0.53 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | 0.62 | 42 |
| Pseudomonas putida KT2440 | 0.58 | PP_5076 | | L-glutamate synthase(NADPH) alpha subunit | 0.52 | PP_1986 | | 3-isopropylmalate dehydratase small subunit | 0.27 | 52 |
| Pseudomonas simiae WCS417 | 0.58 | PS417_02000 | | glutamate synthase | 0.52 | PS417_18595 | | 3-isopropylmalate dehydratase | 0.80 | 10 |
| Pseudomonas fluorescens SBW25 | 0.58 | PFLU_RS02045 | | glutamate synthase large subunit | 0.52 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.58 | PFLU_RS02045 | | glutamate synthase large subunit | 0.52 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.57 | Pf1N1B4_1534 | | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | 0.52 | Pf1N1B4_14 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | — | — |
| Acinetobacter radioresistens SK82 | 0.56 | MPMX26_02808 | | Glutamate synthase [NADPH] large chain | 0.52 | MPMX26_00346 | | 3-isopropylmalate dehydratase small subunit 1 | low | > 36 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.51 | Xcc-8004.44.1 | | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | 0.53 | Xcc-8004.1050.1 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.78 | 50 |
| Rhodanobacter denitrificans MT42 | 0.50 | LRK55_RS10665 | | glutamate synthase large subunit | 0.41 | LRK55_RS07100 | | 3-isopropylmalate dehydratase small subunit | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.50 | LRK54_RS10960 | | glutamate synthase large subunit | 0.41 | LRK54_RS07370 | | 3-isopropylmalate dehydratase small subunit | low | > 59 |
| Dyella japonica UNC79MFTsu3.2 | 0.50 | ABZR86_RS16795 | | glutamate synthase large subunit | 0.42 | ABZR86_RS15955 | | 3-isopropylmalate dehydratase small subunit | 0.92 | 16 |
| Parabacteroides merdae CL09T00C40 | 0.41 | HMPREF1078_RS01270 | | glutamate synthase large subunit | 0.34 | HMPREF1078_RS16655 | | 3-isopropylmalate dehydratase small subunit | low | > 61 |
| Synechococcus elongatus PCC 7942 | 0.41 | Synpcc7942_0890 | glsF | glutamate synthase (ferredoxin) | 0.29 | Synpcc7942_2548 | leuD | isopropylmalate isomerase small subunit | — | — |
| Bacteroides ovatus ATCC 8483 | 0.41 | BACOVA_03756 | | class II glutamine amidotransferase | 0.33 | BACOVA_04602 | | 3-isopropylmalate dehydratase, small subunit | low | > 94 |
| Bosea sp. OAE506 | 0.41 | ABIE41_RS08565 | | glutamate synthase large subunit | 0.45 | ABIE41_RS11640 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.41 | BT0553 | | glutamate synthase, large subunit (NCBI ptt file) | 0.33 | BT1859 | | 3-isopropylmalate dehydratase small subunit (NCBI ptt file) | low | > 81 |
| Phocaeicola vulgatus CL09T03C04 | 0.41 | HMPREF1058_RS06920 | | glutamate synthase large subunit | 0.33 | HMPREF1058_RS14555 | | 3-isopropylmalate dehydratase small subunit | low | > 67 |
| Bacteroides stercoris CC31F | 0.41 | HMPREF1181_RS16055 | | glutamate synthase large subunit | 0.35 | HMPREF1181_RS14140 | | 3-isopropylmalate dehydratase small subunit | low | > 56 |
| Phocaeicola dorei CL03T12C01 | 0.41 | ABI39_RS20685 | | glutamate synthase large subunit | 0.33 | ABI39_RS10205 | | 3-isopropylmalate dehydratase small subunit | low | > 72 |
| Azospirillum sp. SherDot2 | 0.41 | MPMX19_02657 | | Glutamate synthase [NADPH] large chain | 0.50 | MPMX19_00606 | | 3-isopropylmalate dehydratase small subunit 1 | 0.77 | 38 |
| Rhodopseudomonas palustris CGA009 | 0.41 | TX73_004590 | | glutamate synthase large subunit | 0.48 | TX73_001215 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Dechlorosoma suillum PS | 0.40 | Dsui_1096 | | glutamate synthase family protein | 0.48 | Dsui_3199 | | 3-isopropylmalate dehydratase, small subunit | — | — |
| Rhizobium sp. OAE497 | 0.40 | ABIE40_RS16275 | | glutamate synthase large subunit | 0.46 | ABIE40_RS19040 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.40 | CA265_RS08700 | | glutamate synthase large subunit | 0.41 | CA265_RS15840 | | 3-isopropylmalate dehydratase small subunit | 0.82 | 30 |
| Rhodospirillum rubrum S1H | 0.40 | Rru_A0019 | | Glutamate synthase (ferredoxin) (NCBI) | 0.47 | Rru_A1190 | | 3-isopropylmalate dehydratase small subunit region (NCBI) | — | — |
| Herbaspirillum seropedicae SmR1 | 0.40 | HSERO_RS19595 | | glutamate synthase | 0.49 | HSERO_RS16505 | | 3-isopropylmalate dehydratase small subunit | 0.88 | 6 |
| Sinorhizobium meliloti 1021 | 0.40 | SMc04028 | | glutamate synthase | 0.46 | SMc03795 | | isopropylmalate isomerase small subunit | 0.86 | 29 |
| Ralstonia solanacearum GMI1000 | 0.40 | RS_RS14860 | | glutamate synthase subunit alpha | 0.52 | RS_RS09995 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.40 | ABZR88_RS06905 | | glutamate synthase large subunit | 0.40 | ABZR88_RS11600 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.40 | RALBFv3_RS06915 | | glutamate synthase subunit alpha | 0.52 | RALBFv3_RS02615 | | 3-isopropylmalate dehydratase small subunit | 0.62 | 11 |
| Ralstonia solanacearum UW163 | 0.40 | UW163_RS06700 | | glutamate synthase subunit alpha | 0.52 | UW163_RS11110 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Agrobacterium fabrum C58 | 0.40 | Atu3784 | | glutamate synthase large subunit | 0.47 | Atu2790 | | 3-isopropylmalate dehydratase, small subunit | 0.81 | 25 |
| Paraburkholderia sabiae LMG 24235 | 0.40 | QEN71_RS28010 | | glutamate synthase-related protein | 0.51 | QEN71_RS17615 | | 3-isopropylmalate dehydratase small subunit | 0.76 | 39 |
| Ralstonia solanacearum PSI07 | 0.40 | RPSI07_RS10320 | | glutamate synthase subunit alpha | 0.53 | RPSI07_RS14700 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Ralstonia sp. UNC404CL21Col | 0.40 | ABZR87_RS02570 | | glutamate synthase-related protein | 0.52 | ABZR87_RS14535 | | 3-isopropylmalate dehydratase small subunit | 0.86 | 11 |
| Variovorax sp. OAS795 | 0.39 | ABID97_RS23225 | | glutamate synthase-related protein | 0.55 | ABID97_RS08460 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.39 | H281DRAFT_05620 | | glutamate synthase (NADH) large subunit | 0.51 | H281DRAFT_06073 | | 3-isopropylmalate dehydratase, small subunit | 0.65 | 24 |
| Cupriavidus basilensis FW507-4G11 | 0.39 | RR42_RS18990 | | glutamate synthase | 0.51 | RR42_RS14390 | | 3-isopropylmalate dehydratase | 0.74 | 7 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.39 | GFF1327 | | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | 0.54 | GFF3361 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | low | > 90 |
| Castellaniella sp019104865 MT123 | 0.39 | ABCV34_RS11150 | | glutamate synthase-related protein | 0.54 | ABCV34_RS04285 | | 3-isopropylmalate dehydratase small subunit | low | > 48 |
| Burkholderia phytofirmans PsJN | 0.39 | BPHYT_RS17855 | | glutamate synthase | 0.50 | BPHYT_RS33905 | | 3-isopropylmalate dehydratase small subunit | 0.69 | 59 |
| Sphingomonas koreensis DSMZ 15582 | 0.39 | Ga0059261_1800 | | Glutamate synthase domain 2 | 0.38 | Ga0059261_4225 | | 3-isopropylmalate dehydratase, small subunit | 0.76 | 50 |
| Variovorax sp. SCN45 | 0.39 | GFF5332 | | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | 0.55 | GFF3889 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | low | > 127 |
| Rhodanobacter sp. FW510-T8 | 0.39 | OKGIIK_15200 | | Glutamate synthase subunit alpha | 0.39 | OKGIIK_13590 | leuD | 3-isopropylmalate dehydratase small subunit | low | > 52 |
| Acidovorax sp. GW101-3H11 | 0.39 | Ac3H11_4710 | | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | 0.53 | Ac3H11_1527 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.79 | 19 |
| Magnetospirillum magneticum AMB-1 | 0.39 | AMB_RS02685 | | glutamate synthase large subunit | 0.49 | AMB_RS20565 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Mycobacterium tuberculosis H37Rv | 0.39 | Rv3859c | | Probable ferredoxin-dependent glutamate synthase [NADPH] (large subunit) GltB (L-glutamate synthase) (L-glutamate synthetase) (NADH-glutamate synthase) (glutamate synthase (NADH))(NADPH-GOGAT) | 0.35 | Rv2987c | | Probable 3-isopropylmalate dehydratase (small subunit) LeuD (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.39 | PGA1_c36100 | | glutamate synthase [NADPH] large chain | 0.45 | PGA1_c29790 | | 3-isopropylmalate dehydratase small subunit | 0.70 | 17 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.39 | Echvi_1244 | | Glutamate synthase domain 2 | 0.35 | Echvi_2060 | | 3-isopropylmalate dehydratase, small subunit | — | — |
| Dinoroseobacter shibae DFL-12 | 0.38 | Dshi_0002 | | Glutamate synthase (ferredoxin) (RefSeq) | 0.50 | Dshi_0083 | | 3-isopropylmalate dehydratase, small subunit (RefSeq) | low | > 64 |
| Caulobacter crescentus NA1000 Δfur | 0.38 | CCNA_03722 | | glutamate synthase (NADPH) large chain GltB | 0.46 | CCNA_00195 | | 3-isopropylmalate dehydratase small subunit | low | > 67 |
| Caulobacter crescentus NA1000 | 0.38 | CCNA_03722 | | glutamate synthase (NADPH) large chain GltB | 0.46 | CCNA_00195 | | 3-isopropylmalate dehydratase small subunit | 0.86 | 31 |
| Bifidobacterium breve UCC2003 | 0.37 | BBR_RS15255 | | glutamate synthase large subunit | 0.39 | BBR_RS19625 | | 3-isopropylmalate dehydratase small subunit | low | > 34 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.37 | A4249_RS16105 | | glutamate synthase large subunit | 0.37 | A4249_RS10000 | | 3-isopropylmalate dehydratase small subunit | 0.99 | 21 |
Not shown: 0 genomes with orthologs for Sama_0857 only; 7 genomes with orthologs for Sama_0338 only