Conservation of cofitness between b2733 and b2892 in Escherichia coli BW25113

92 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2733 mutS DNA mismatch repair protein (NCBI) 1.0 b2892 recJ ssDNA exonuclease, 5' --> 3'-specific (NCBI) 0.24 12
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01000 DNA mismatch repair protein MutS 0.99 OHPLBJKB_00823 Single-stranded-DNA-specific exonuclease RecJ low > 73
Escherichia coli BL21 1.00 ECD_02583 methyl-directed mismatch repair protein 0.99 ECD_02724 ssDNA exonuclease, 5 low > 60
Escherichia coli ECRC102 1.00 NIAGMN_18295 mutS DNA mismatch repair protein MutS 0.99 NIAGMN_17345 recJ single-stranded-DNA-specific exonuclease RecJ — —
Escherichia coli ECRC99 1.00 KEDOAH_07610 mutS DNA mismatch repair protein MutS 0.99 KEDOAH_08560 recJ single-stranded-DNA-specific exonuclease RecJ — —
Escherichia coli ECRC101 1.00 MCAODC_11050 mutS DNA mismatch repair protein MutS 0.99 MCAODC_10100 recJ single-stranded-DNA-specific exonuclease RecJ — —
Escherichia coli ECRC98 1.00 JDDGAC_24190 mutS DNA mismatch repair protein MutS 0.99 JDDGAC_23220 recJ single-stranded-DNA-specific exonuclease RecJ — —
Escherichia coli ECOR27 1.00 NOLOHH_12370 mutS DNA mismatch repair protein MutS 0.99 NOLOHH_11505 recJ single-stranded-DNA-specific exonuclease RecJ low > 57
Escherichia coli ECRC101 1.00 OKFHMN_20525 mutS DNA mismatch repair protein MutS 0.99 OKFHMN_19580 recJ single-stranded-DNA-specific exonuclease RecJ — —
Escherichia coli ECRC62 1.00 BNILDI_10920 mutS DNA mismatch repair protein MutS 0.99 BNILDI_10035 recJ single-stranded-DNA-specific exonuclease RecJ — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS15275 DNA mismatch repair protein MutS 0.99 ECOLIN_RS16115 single-stranded-DNA-specific exonuclease RecJ low > 52
Escherichia coli ECOR38 0.99 HEPCGN_19705 mutS DNA mismatch repair protein MutS 0.99 HEPCGN_18870 recJ single-stranded-DNA-specific exonuclease RecJ low > 85
Escherichia fergusonii Becca 0.98 EFB2_01179 DNA mismatch repair protein MutS 0.99 EFB2_01009 Single-stranded-DNA-specific exonuclease RecJ low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF4773 DNA mismatch repair protein MutS 0.93 GFF2989 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) low > 78
Enterobacter sp. TBS_079 0.92 MPMX20_03619 DNA mismatch repair protein MutS 0.89 MPMX20_03751 Single-stranded-DNA-specific exonuclease RecJ 0.18 41
Enterobacter asburiae PDN3 0.92 EX28DRAFT_2829 DNA mismatch repair protein MutS 0.90 EX28DRAFT_2943 single-stranded-DNA-specific exonuclease RecJ low > 76
Klebsiella michiganensis M5al 0.92 BWI76_RS22600 DNA mismatch repair protein MutS 0.89 BWI76_RS23805 ssDNA exonuclease RecJ low > 92
Dickeya dianthicola ME23 0.85 DZA65_RS05570 DNA mismatch repair protein MutS 0.77 DZA65_RS03495 single-stranded-DNA-specific exonuclease RecJ low > 75
Serratia liquefaciens MT49 0.85 IAI46_03800 DNA mismatch repair protein MutS 0.79 IAI46_20720 single-stranded-DNA-specific exonuclease RecJ low > 86
Dickeya dadantii 3937 0.85 DDA3937_RS05230 DNA mismatch repair protein MutS 0.76 DDA3937_RS03310 single-stranded-DNA-specific exonuclease RecJ low > 74
Dickeya dianthicola 67-19 0.85 HGI48_RS05230 DNA mismatch repair protein MutS 0.77 HGI48_RS03450 single-stranded-DNA-specific exonuclease RecJ low > 71
Erwinia tracheiphila SCR3 0.84 LU632_RS06485 mutS DNA mismatch repair protein MutS 0.72 LU632_RS05985 recJ single-stranded-DNA-specific exonuclease RecJ low > 74
Rahnella sp. WP5 0.84 EX31_RS07820 DNA mismatch repair protein MutS 0.76 EX31_RS13470 single-stranded-DNA-specific exonuclease RecJ low > 89
Pectobacterium carotovorum WPP14 0.84 HER17_RS16220 DNA mismatch repair protein MutS 0.72 HER17_RS17880 single-stranded-DNA-specific exonuclease RecJ low > 75
Pantoea sp. MT58 0.82 IAI47_04240 DNA mismatch repair protein MutS 0.77 IAI47_03830 single-stranded-DNA-specific exonuclease RecJ low > 76
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_02840 DNA mismatch repair protein MutS 0.64 CSW01_12240 single-stranded-DNA-specific exonuclease RecJ low > 62
Shewanella sp. ANA-3 0.67 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) 0.58 Shewana3_3329 single-stranded-DNA-specific exonuclease RecJ (RefSeq) low > 73
Shewanella loihica PV-4 0.66 Shew_1214 DNA mismatch repair protein (RefSeq) 0.57 Shew_0772 single-stranded-DNA-specific exonuclease RecJ (RefSeq) low > 60
Shewanella oneidensis MR-1 0.65 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) 0.57 SO0952 recJ single-stranded-DNA-specific exonuclease RecJ (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.65 Sama_1045 DNA mismatch repair protein MutS (RefSeq) 0.57 Sama_2737 single-stranded-DNA-specific exonuclease RecJ (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.63 MIT1002_00953 DNA mismatch repair protein MutS 0.53 MIT1002_00788 Single-stranded-DNA-specific exonuclease RecJ low > 70
Marinobacter adhaerens HP15 0.60 HP15_1047 DNA mismatch repair protein MutS 0.50 HP15_766 bacterial RecJ exonuclease low > 73
Pseudomonas sp. RS175 0.58 PFR28_00429 DNA mismatch repair protein MutS 0.55 PFR28_00339 Single-stranded-DNA-specific exonuclease RecJ low > 88
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_3035 DNA mismatch repair protein MutS 0.56 Pf6N2E2_3137 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) low > 103
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_05875 DNA mismatch repair protein MutS 0.56 AO356_06345 single-stranded-DNA-specific exonuclease RecJ low > 104
Pseudomonas simiae WCS417 0.58 PS417_05680 DNA mismatch repair protein MutS 0.57 PS417_22855 ssDNA exonuclease RecJ low > 88
Pseudomonas stutzeri RCH2 0.58 Psest_2875 DNA mismatch repair protein MutS 0.53 Psest_1544 single-stranded-DNA-specific exonuclease RecJ 0.27 37
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_3117 DNA mismatch repair protein MutS 0.56 Pf1N1B4_3020 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) low > 87
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_16625 DNA mismatch repair protein MutS 0.55 AO353_04320 single-stranded-DNA-specific exonuclease RecJ low > 101
Pseudomonas putida KT2440 0.57 PP_1626 DNA mismatch repair protein MutS 0.55 PP_1477 ssDNA-specific exonuclease RecJ low > 96
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_1376 DNA mismatch repair protein MutS 0.57 Psyr_1298 exonuclease RecJ low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_1376 DNA mismatch repair protein MutS 0.57 Psyr_1298 exonuclease RecJ low > 86
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_4672 DNA mismatch repair protein MutS 0.55 PfGW456L13_1730 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) low > 87
Pseudomonas fluorescens SBW25 0.57 PFLU_RS05765 DNA mismatch repair protein MutS 0.56 PFLU_RS24515 single-stranded-DNA-specific exonuclease RecJ low > 109
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS05765 DNA mismatch repair protein MutS 0.56 PFLU_RS24515 single-stranded-DNA-specific exonuclease RecJ low > 109
Pseudomonas sp. S08-1 0.57 OH686_18195 DNA mismatch repair protein MutS 0.56 OH686_06955 single-stranded-DNA-specific exonuclease RecJ low > 80
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS00630 DNA mismatch repair protein MutS 0.44 ABZR86_RS02800 single-stranded-DNA-specific exonuclease RecJ low > 74
Rhodanobacter denitrificans MT42 0.54 LRK55_RS14650 DNA mismatch repair protein MutS 0.17 LRK55_RS18310 DHHA1 domain-containing protein low > 63
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_03705 mutS DNA mismatch repair protein MutS 0.41 OKGIIK_06995 recJ single-stranded-DNA-specific exonuclease RecJ low > 52
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS14935 DNA mismatch repair protein MutS 0.41 LRK54_RS00315 single-stranded-DNA-specific exonuclease RecJ low > 59
Kangiella aquimarina DSM 16071 0.52 B158DRAFT_1529 DNA mismatch repair protein MutS 0.49 B158DRAFT_2268 single-stranded-DNA-specific exonuclease RecJ low > 40
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.3760.1 DNA mismatch repair protein MutS 0.43 Xcc-8004.2909.1 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) low > 74
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_00537 DNA mismatch repair protein MutS 0.40 H281DRAFT_00488 exonuclease RecJ low > 103
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS10580 DNA mismatch repair protein MutS 0.40 ABZR87_RS10395 single-stranded-DNA-specific exonuclease RecJ low > 80
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS06285 DNA mismatch repair protein MutS 0.41 RR42_RS06090 single-stranded DNA exonuclease low > 128
Dechlorosoma suillum PS 0.49 Dsui_2244 DNA mismatch repair protein MutS 0.44 Dsui_2860 single-stranded-DNA-specific exonuclease RecJ — —
Ralstonia solanacearum UW163 0.49 UW163_RS12390 DNA mismatch repair protein MutS 0.41 UW163_RS12210 single-stranded-DNA-specific exonuclease RecJ — —
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS14920 DNA mismatch repair protein MutS 0.41 RALBFv3_RS14740 single-stranded-DNA-specific exonuclease RecJ low > 76
Ralstonia solanacearum PSI07 0.49 RPSI07_RS18440 DNA mismatch repair protein MutS 0.41 RPSI07_RS18620 single-stranded-DNA-specific exonuclease RecJ low > 81
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS16360 DNA mismatch repair protein MutS 0.41 HSERO_RS13965 single-stranded DNA exonuclease low > 78
Ralstonia solanacearum GMI1000 0.49 RS_RS05735 DNA mismatch repair protein MutS 0.41 RS_RS05550 single-stranded-DNA-specific exonuclease RecJ low > 80
Paraburkholderia graminis OAS925 0.49 ABIE53_002719 DNA mismatch repair protein MutS 0.39 ABIE53_002771 single-stranded-DNA-specific exonuclease low > 113
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS12475 DNA mismatch repair protein MutS 0.40 BPHYT_RS12730 single-stranded DNA exonuclease low > 109
Acinetobacter radioresistens SK82 0.47 MPMX26_01954 DNA mismatch repair protein MutS 0.42 MPMX26_02917 Single-stranded-DNA-specific exonuclease RecJ low > 36
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS06085 DNA mismatch repair protein MutS 0.41 QEN71_RS05835 single-stranded-DNA-specific exonuclease RecJ low > 153
Castellaniella sp019104865 MT123 0.44 ABCV34_RS00270 DNA mismatch repair protein MutS 0.38 ABCV34_RS05005 single-stranded-DNA-specific exonuclease RecJ low > 48
Acidovorax sp. GW101-3H11 0.44 Ac3H11_3641 DNA mismatch repair protein MutS 0.41 Ac3H11_1746 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) — —
Variovorax sp. SCN45 0.44 GFF6634 DNA mismatch repair protein MutS 0.39 GFF6700 Single-stranded-DNA-specific exonuclease RecJ low > 127
Variovorax sp. OAS795 0.43 ABID97_RS20815 DNA mismatch repair protein MutS 0.40 ABID97_RS22940 single-stranded-DNA-specific exonuclease RecJ low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF3599 DNA mismatch repair protein MutS 0.36 GFF739 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.36 ABZR88_RS10580 DNA mismatch repair protein MutS 0.24 ABZR88_RS18635 single-stranded-DNA-specific exonuclease RecJ low > 71
Bacteroides ovatus ATCC 8483 0.36 BACOVA_02824 DNA mismatch repair protein MutS 0.24 BACOVA_01165 single-stranded-DNA-specific exonuclease RecJ — —
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS11435 DNA mismatch repair protein MutS 0.24 HMPREF1058_RS14835 single-stranded-DNA-specific exonuclease RecJ low > 67
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS05500 DNA mismatch repair protein MutS 0.24 ABI39_RS10550 single-stranded-DNA-specific exonuclease RecJ — —
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS01980 DNA mismatch repair protein MutS 0.24 HMPREF1181_RS06545 single-stranded-DNA-specific exonuclease RecJ low > 56
Bacteroides thetaiotaomicron VPI-5482 0.36 BT3121 DNA mismatch repair protein mutS (NCBI ptt file) 0.24 BT3939 single-stranded-DNA-specific exonuclease recJ (NCBI ptt file) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.36 CA264_18545 DNA mismatch repair protein MutS 0.23 CA264_17545 single-stranded-DNA-specific exonuclease RecJ low > 74
Parabacteroides merdae CL09T00C40 0.35 HMPREF1078_RS06455 DNA mismatch repair protein MutS 0.25 HMPREF1078_RS07725 single-stranded-DNA-specific exonuclease RecJ low > 61
Echinicola vietnamensis KMM 6221, DSM 17526 0.35 Echvi_0960 DNA mismatch repair protein MutS 0.24 Echvi_1332 single-stranded-DNA-specific exonuclease RecJ low > 79
Dinoroseobacter shibae DFL-12 0.35 Dshi_3466 DNA mismatch repair protein MutS (RefSeq) 0.21 Dshi_2275 single-stranded-DNA-specific exonuclease RecJ (RefSeq) — —
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS08220 DNA mismatch repair protein MutS 0.24 CA265_RS25225 single-stranded-DNA-specific exonuclease RecJ — —
Azospirillum sp. SherDot2 0.33 MPMX19_00908 DNA mismatch repair protein MutS 0.23 MPMX19_00667 Single-stranded-DNA-specific exonuclease RecJ — —
Phaeobacter inhibens DSM 17395 0.33 PGA1_c35000 DNA mismatch repair protein MutS 0.23 PGA1_c08630 single-stranded-DNA-specific exonuclease RecJ — —
Rhodospirillum rubrum S1H 0.33 Rru_A3541 MutS 1 protein (NCBI) 0.24 Rru_A2408 RecJ exonuclease (NCBI) — —
Desulfovibrio vulgaris Miyazaki F 0.32 DvMF_0355 DNA mismatch repair protein MutS (RefSeq) 0.22 DvMF_1134 single-stranded-DNA-specific exonuclease RecJ (RefSeq) low > 51
Magnetospirillum magneticum AMB-1 0.32 AMB_RS01455 DNA mismatch repair protein MutS 0.23 AMB_RS18875 single-stranded-DNA-specific exonuclease RecJ — —
Agrobacterium fabrum C58 0.32 Atu0345 DNA mismatch repair protein, MutS family 0.24 Atu1586 single-stranded-DNA-specific exonuclease — —
Rhodopseudomonas palustris CGA009 0.32 TX73_002655 DNA mismatch repair protein MutS 0.23 TX73_012960 single-stranded-DNA-specific exonuclease RecJ — —
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_3784 DNA mismatch repair protein MutS 0.21 Ga0059261_3089 single-stranded-DNA-specific exonuclease RecJ — —
Desulfovibrio vulgaris Hildenborough JW710 0.32 DVU1649 mutS DNA mismatch repair protein MutS (TIGR) 0.22 DVU0904 recJ single-stranded-DNA-specific exonuclease RecJ (TIGR) low > 55
Rhizobium sp. OAE497 0.31 ABIE40_RS01775 DNA mismatch repair protein MutS 0.24 ABIE40_RS08655 single-stranded-DNA-specific exonuclease RecJ — —
Sinorhizobium meliloti 1021 0.31 SMc01125 DNA mismatch repair protein MutS 0.19 SMc00292 single-stranded-DNA-specific exonuclease — —
Bosea sp. OAE506 0.30 ABIE41_RS03650 DNA mismatch repair protein MutS 0.24 ABIE41_RS19130 single-stranded-DNA-specific exonuclease RecJ low > 77

Not shown: 7 genomes with orthologs for b2733 only; 0 genomes with orthologs for b2892 only