| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BW25113 | 1.0 | b1180 | ycgM | predicted isomerase/hydrolase (NCBI) | 1.0 | b1260 | trpA | tryptophan synthase subunit alpha (NCBI) | 0.20 | 12 |
| Escherichia coli ECRC101 | 0.99 | MCAODC_21930 | ycgM | fumarylacetoacetate hydrolase family protein | 0.99 | MCAODC_15590 | trpA | tryptophan synthase subunit alpha | — | — |
| Escherichia coli ECRC102 | 0.99 | NIAGMN_27980 | ycgM | fumarylacetoacetate hydrolase family protein | 0.99 | NIAGMN_26845 | trpA | tryptophan synthase subunit alpha | — | — |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_24690 | ycgM | fumarylacetoacetate hydrolase family protein | 0.94 | HEPCGN_25515 | trpA | tryptophan synthase subunit alpha | low | > 85 |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS07140 | | fumarylacetoacetate hydrolase family protein | 0.99 | ECOLIN_RS07595 | | tryptophan synthase subunit alpha | — | — |
| Escherichia coli BL21 | 0.99 | ECD_01155 | | putative isomerase/hydrolase | 1.00 | ECD_01234 | | tryptophan synthase, alpha subunit | — | — |
| Escherichia coli ECRC101 | 0.99 | OKFHMN_28240 | ycgM | fumarylacetoacetate hydrolase family protein | 0.99 | OKFHMN_02675 | trpA | tryptophan synthase subunit alpha | — | — |
| Escherichia coli ECRC98 | 0.99 | JDDGAC_06270 | ycgM | fumarylacetoacetate hydrolase family protein | 0.99 | JDDGAC_05220 | trpA | tryptophan synthase subunit alpha | — | — |
| Escherichia coli ECRC99 | 0.99 | KEDOAH_25255 | ycgM | fumarylacetoacetate hydrolase family protein | 0.99 | KEDOAH_26075 | trpA | tryptophan synthase subunit alpha | — | — |
| Escherichia fergusonii Becca | 0.99 | EFB2_02751 | | putative protein YcgM | 0.99 | EFB2_02666 | | Tryptophan synthase alpha chain | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.99 | OHPLBJKB_02511 | | putative protein YcgM | 1.00 | OHPLBJKB_02423 | | Tryptophan synthase alpha chain | low | > 73 |
| Escherichia coli ECOR27 | 0.99 | NOLOHH_20780 | ycgM | fumarylacetoacetate hydrolase family protein | 1.00 | NOLOHH_20335 | trpA | tryptophan synthase subunit alpha | — | — |
| Escherichia coli ECRC62 | 0.99 | BNILDI_18940 | ycgM | fumarylacetoacetate hydrolase family protein | 1.00 | BNILDI_18480 | trpA | tryptophan synthase subunit alpha | — | — |
| Enterobacter asburiae PDN3 | 0.88 | EX28DRAFT_0760 | | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | 0.85 | EX28DRAFT_0932 | | tryptophan synthase, alpha chain (EC 4.2.1.20) | low | > 76 |
| Enterobacter sp. TBS_079 | 0.88 | MPMX20_02705 | | putative protein YcgM | 0.85 | MPMX20_02514 | | Tryptophan synthase alpha chain | low | > 85 |
| Klebsiella michiganensis M5al | 0.88 | BWI76_RS17770 | | isomerase/hydrolase | 0.85 | BWI76_RS11840 | | tryptophan synthase subunit alpha | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.88 | GFF2814 | | FIG094199: Fumarylacetoacetate hydrolase | 0.85 | GFF2726 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | low | > 78 |
| Pantoea sp. MT58 | 0.81 | IAI47_08865 | | fumarylacetoacetate hydrolase family protein | 0.73 | IAI47_09165 | | tryptophan synthase subunit alpha | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.80 | LU632_RS13105 | | fumarylacetoacetate hydrolase family protein | 0.72 | LU632_RS12775 | trpA | tryptophan synthase subunit alpha | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.76 | HER17_RS11245 | | fumarylacetoacetate hydrolase family protein | 0.80 | HER17_RS10940 | | tryptophan synthase subunit alpha | low | > 75 |
| Serratia liquefaciens MT49 | 0.76 | IAI46_14500 | | fumarylacetoacetate hydrolase family protein | 0.78 | IAI46_14045 | | tryptophan synthase subunit alpha | low | > 86 |
| Dickeya dadantii 3937 | 0.76 | DDA3937_RS11195 | | fumarylacetoacetate hydrolase family protein | 0.79 | DDA3937_RS10460 | | tryptophan synthase subunit alpha | low | > 74 |
| Dickeya dianthicola ME23 | 0.75 | DZA65_RS11575 | | fumarylacetoacetate hydrolase family protein | 0.79 | DZA65_RS10940 | | tryptophan synthase subunit alpha | 0.30 | 66 |
| Dickeya dianthicola 67-19 | 0.75 | HGI48_RS11230 | | fumarylacetoacetate hydrolase family protein | 0.79 | HGI48_RS10460 | | tryptophan synthase subunit alpha | low | > 71 |
| Rahnella sp. WP5 | 0.71 | EX31_RS10565 | | fumarylacetoacetate hydrolase family protein | 0.75 | EX31_RS09980 | | tryptophan synthase subunit alpha | 0.57 | 30 |
| Alteromonas macleodii MIT1002 | 0.54 | MIT1002_02584 | | Ureidoglycolate lyase | 0.54 | MIT1002_01425 | | Tryptophan synthase alpha chain | — | — |
| Marinobacter adhaerens HP15 | 0.50 | HP15_2550 | | fumarylacetoacetate hydrolase family protein | 0.29 | HP15_1826 | | tryptophan synthase, alpha subunit | — | — |
| Pseudomonas stutzeri RCH2 | 0.48 | Psest_3871 | | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | 0.30 | Psest_0062 | | tryptophan synthase, alpha subunit | low | > 67 |
| Pseudomonas putida KT2440 | 0.48 | PP_5153 | | putative isomerase/hydrolase | 0.31 | PP_0082 | | tryptophan synthase alpha chain | low | > 96 |
| Pseudomonas fluorescens FW300-N2C3 | 0.46 | AO356_10310 | | hypothetical protein | 0.28 | AO356_10910 | | tryptophan synthase subunit alpha | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.46 | Pf6N2E2_3934 | | Fumarylacetoacetate hydrolase family protein | 0.28 | Pf6N2E2_4047 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.46 | AO353_08500 | | hypothetical protein | 0.28 | AO353_10705 | | tryptophan synthase subunit alpha | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.45 | Pf1N1B4_2275 | | Fumarylacetoacetate hydrolase family protein | 0.28 | Pf1N1B4_1830 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | low | > 87 |
| Pseudomonas simiae WCS417 | 0.45 | PS417_27030 | | hypothetical protein | 0.29 | PS417_00180 | | tryptophan synthase subunit alpha | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.45 | PFLU_RS28685 | | fumarylacetoacetate hydrolase family protein | 0.29 | PFLU_RS00175 | | tryptophan synthase subunit alpha | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.45 | PFLU_RS28685 | | fumarylacetoacetate hydrolase family protein | 0.29 | PFLU_RS00175 | | tryptophan synthase subunit alpha | low | > 109 |
| Pseudomonas sp. S08-1 | 0.45 | OH686_11290 | | Fumarylacetoacetate hydrolase family protein | 0.28 | OH686_12430 | | tryptophan synthase, alpha subunit | low | > 80 |
| Pseudomonas fluorescens GW456-L13 | 0.45 | PfGW456L13_945 | | Fumarylacetoacetate hydrolase family protein | 0.29 | PfGW456L13_565 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | low | > 87 |
| Pseudomonas syringae pv. syringae B728a | 0.44 | Psyr_4850 | | Fumarylacetoacetate (FAA) hydrolase | 0.31 | Psyr_0033 | | tryptophan synthase, alpha chain | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.44 | Psyr_4850 | | Fumarylacetoacetate (FAA) hydrolase | 0.31 | Psyr_0033 | | tryptophan synthase, alpha chain | low | > 86 |
| Pseudomonas sp. RS175 | 0.44 | PFR28_04840 | | putative protein YcgM | 0.28 | PFR28_04716 | | Tryptophan synthase alpha chain | — | — |
| Acinetobacter radioresistens SK82 | 0.39 | MPMX26_02677 | | putative protein YcgM | 0.27 | MPMX26_02611 | | Tryptophan synthase alpha chain | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.39 | CA264_11935 | | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | 0.26 | CA264_05085 | | tryptophan synthase subunit alpha | low | > 74 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.38 | ABZR88_RS01675 | | fumarylacetoacetate hydrolase family protein | 0.24 | ABZR88_RS10660 | | tryptophan synthase subunit alpha | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.38 | Echvi_2930 | | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | 0.24 | Echvi_2511 | | tryptophan synthase, alpha subunit | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.37 | ABZR86_RS11730 | | fumarylacetoacetate hydrolase family protein | 0.29 | ABZR86_RS07995 | | tryptophan synthase subunit alpha | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.37 | CA265_RS15165 | | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | 0.25 | CA265_RS05025 | | tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data) | — | — |
| Castellaniella sp019104865 MT123 | 0.37 | ABCV34_RS04400 | | fumarylacetoacetate hydrolase family protein | 0.26 | ABCV34_RS08430 | | tryptophan synthase subunit alpha | — | — |
| Ralstonia solanacearum PSI07 | 0.37 | RPSI07_RS22260 | | FAA hydrolase family protein | 0.27 | RPSI07_RS14740 | | tryptophan synthase subunit alpha | — | — |
| Ralstonia solanacearum UW163 | 0.36 | UW163_RS02535 | | FAA hydrolase family protein | 0.27 | UW163_RS11150 | | tryptophan synthase subunit alpha | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.36 | RALBFv3_RS11045 | | FAA hydrolase family protein | 0.27 | RALBFv3_RS02575 | | tryptophan synthase subunit alpha | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.36 | LRK54_RS11925 | | fumarylacetoacetate hydrolase family protein | 0.28 | LRK54_RS01680 | | tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data) | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.36 | LRK55_RS11650 | | fumarylacetoacetate hydrolase family protein | 0.28 | LRK55_RS01460 | | tryptophan synthase subunit alpha | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.36 | OKGIIK_11960 | | Fumarylacetoacetate hydrolase | 0.28 | OKGIIK_04850 | trpA | tryptophan synthase subunit alpha | low | > 52 |
| Ralstonia sp. UNC404CL21Col | 0.35 | ABZR87_RS06915 | | fumarylacetoacetate hydrolase family protein | 0.27 | ABZR87_RS14490 | | tryptophan synthase subunit alpha | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.35 | RS_RS01890 | | FAA hydrolase family protein | 0.27 | RS_RS09955 | | tryptophan synthase subunit alpha | low | > 80 |
| Caulobacter crescentus NA1000 | 0.35 | CCNA_03682 | | fumarylpyruvate hydrolase | 0.28 | CCNA_03657 | | tryptophan synthase alpha chain | low | > 66 |
| Sinorhizobium meliloti 1021 | 0.35 | SMc04240 | | hypothetical protein | 0.27 | SMc02765 | | tryptophan synthase subunit alpha | low | > 103 |
| Cupriavidus basilensis FW507-4G11 | 0.35 | RR42_RS01965 | | 5-carboxymethyl-2-hydroxymuconate isomerase | 0.27 | RR42_RS14350 | | tryptophan synthase alpha chain | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.35 | CCNA_03682 | | fumarylpyruvate hydrolase | 0.28 | CCNA_03657 | | tryptophan synthase alpha chain | low | > 67 |
| Variovorax sp. SCN45 | 0.35 | GFF1928 | | Fumarylacetoacetate hydrolase family protein | 0.27 | GFF3882 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | — | — |
| Rhodospirillum rubrum S1H | 0.35 | Rru_A3697 | | Fumarylacetoacetate (FAA) hydrolase (NCBI) | 0.23 | Rru_A3428 | | Tryptophan synthase (NCBI) | low | > 58 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.35 | BT3883 | | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (NCBI ptt file) | 0.25 | BT0527 | | tryptophan synthase alpha chain (NCBI ptt file) | low | > 81 |
| Bacteroides stercoris CC31F | 0.35 | HMPREF1181_RS06960 | | fumarylacetoacetate hydrolase family protein | 0.23 | HMPREF1181_RS15350 | | tryptophan synthase subunit alpha | low | > 56 |
| Herbaspirillum seropedicae SmR1 | 0.34 | HSERO_RS17860 | | 5-carboxymethyl-2-hydroxymuconate isomerase | 0.28 | HSERO_RS16470 | | tryptophan synthase subunit alpha | 0.20 | 67 |
| Variovorax sp. OAS795 | 0.34 | ABID97_RS12395 | | fumarylacetoacetate hydrolase family protein | 0.25 | ABID97_RS08425 | | tryptophan synthase subunit alpha | low | > 91 |
| Bacteroides ovatus ATCC 8483 | 0.34 | BACOVA_01105 | | FAH family protein | 0.25 | BACOVA_03785 | | tryptophan synthase, alpha subunit | low | > 94 |
| Dinoroseobacter shibae DFL-12 | 0.34 | Dshi_2538 | | fumarylacetoacetate (FAA) hydrolase (RefSeq) | 0.29 | Dshi_0952 | | tryptophan synthase, alpha subunit (RefSeq) | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.34 | HMPREF1058_RS00475 | | fumarylacetoacetate hydrolase family protein | 0.24 | HMPREF1058_RS07200 | | tryptophan synthase subunit alpha | low | > 67 |
| Azospirillum sp. SherDot2 | 0.34 | MPMX19_00039 | | Fumarylpyruvate hydrolase | 0.26 | MPMX19_02737 | | Tryptophan synthase alpha chain | low | > 112 |
| Lysobacter sp. OAE881 | 0.34 | ABIE51_RS16580 | | fumarylacetoacetate hydrolase family protein | 0.31 | ABIE51_RS08265 | | tryptophan synthase subunit alpha | low | > 62 |
| Agrobacterium fabrum C58 | 0.33 | Atu1516 | | hypothetical protein | 0.24 | Atu0019 | | tryptophan synthase alpha subunit | — | — |
| Phocaeicola dorei CL03T12C01 | 0.33 | ABI39_RS08095 | | fumarylacetoacetate hydrolase family protein | 0.24 | ABI39_RS21075 | | tryptophan synthase subunit alpha | low | > 72 |
| Acidovorax sp. GW101-3H11 | 0.33 | Ac3H11_2308 | | Fumarylacetoacetate hydrolase family protein | 0.26 | Ac3H11_1535 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.33 | GFF4807 | | Fumarylacetoacetase (EC 3.7.1.2) | 0.27 | GFF3354 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | low | > 90 |
| Parabacteroides merdae CL09T00C40 | 0.33 | HMPREF1078_RS04845 | | fumarylacetoacetate hydrolase family protein | 0.24 | HMPREF1078_RS00120 | | tryptophan synthase subunit alpha | 0.68 | 41 |
| Shewanella loihica PV-4 | 0.32 | Shew_1535 | | fumarylacetoacetate (FAA) hydrolase (RefSeq) | 0.63 | Shew_2256 | trpA | tryptophan synthase subunit alpha (RefSeq) | low | > 60 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.32 | Xcc-8004.1278.1 | | Fumarylacetoacetate hydrolase family protein | 0.25 | Xcc-8004.1967.1 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | low | > 74 |
| Dechlorosoma suillum PS | 0.32 | Dsui_1428 | | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase | 0.31 | Dsui_3191 | | tryptophan synthase, alpha subunit | — | — |
| Rhizobium sp. OAE497 | 0.31 | ABIE40_RS10920 | | fumarylacetoacetate hydrolase family protein | 0.26 | ABIE40_RS19340 | | tryptophan synthase subunit alpha | — | — |
| Rhodopseudomonas palustris CGA009 | 0.31 | TX73_020685 | | fumarylacetoacetate hydrolase family protein | 0.27 | TX73_000365 | | tryptophan synthase subunit alpha | — | — |
| Bosea sp. OAE506 | 0.31 | ABIE41_RS03580 | | fumarylacetoacetate hydrolase family protein | 0.25 | ABIE41_RS03930 | | tryptophan synthase subunit alpha | — | — |
| Phaeobacter inhibens DSM 17395 | 0.31 | PGA1_c33930 | | fumarylacetoacetate hydrolase family protein | 0.29 | PGA1_c04930 | | tryptophan synthase alpha chain | — | — |
| Burkholderia phytofirmans PsJN | 0.31 | BPHYT_RS02800 | | 5-carboxymethyl-2-hydroxymuconate isomerase | 0.26 | BPHYT_RS33865 | | tryptophan synthase alpha chain | low | > 109 |
| Methanococcus maripaludis S2 | 0.30 | MMP_RS00825 | | fumarylacetoacetate hydrolase family protein | 0.27 | MMP_RS05185 | | tryptophan synthase subunit alpha | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.30 | QEN71_RS01650 | | fumarylacetoacetate hydrolase family protein | 0.27 | QEN71_RS17655 | | tryptophan synthase subunit alpha | low | > 153 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.30 | A4249_RS12090 | | fumarylacetoacetate hydrolase family protein | 0.25 | A4249_RS11320 | | tryptophan synthase subunit alpha | — | — |
| Methanococcus maripaludis JJ | 0.30 | MMJJ_RS04665 | | fumarylacetoacetate hydrolase family protein | 0.26 | MMJJ_RS09195 | | tryptophan synthase subunit alpha | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.30 | Ga0059261_0508 | | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | 0.28 | Ga0059261_0239 | | tryptophan synthase, alpha chain (EC 4.2.1.20) | low | > 68 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.30 | H281DRAFT_01971 | | fumarylpyruvate hydrolase | 0.27 | H281DRAFT_06065 | | tryptophan synthase, alpha chain | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.29 | ABIE53_000698 | | fumarylpyruvate hydrolase | 0.28 | ABIE53_004811 | | tryptophan synthase alpha chain | low | > 113 |
| Shewanella amazonensis SB2B | 0.28 | Sama_1093 | | fumarylacetoacetate (FAA) hydrolase (RefSeq) | 0.58 | Sama_2134 | trpA | tryptophan synthase subunit alpha (RefSeq) | low | > 62 |
| Vibrio cholerae E7946 ATCC 55056 | 0.27 | CSW01_19130 | | FAA hydrolase family protein | 0.61 | CSW01_05925 | | tryptophan synthase subunit alpha | low | > 62 |
Not shown: 1 genomes with orthologs for b1180 only; 8 genomes with orthologs for b1260 only