Conservation of cofitness between b2518 and b0720 in Escherichia coli BW25113

91 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2518 ndk nucleoside diphosphate kinase (NCBI) 1.0 b0720 gltA citrate synthase (NCBI) 0.37 8
Escherichia coli ECRC101 1.00 MCAODC_12235 ndk nucleoside-diphosphate kinase 1.00 MCAODC_26180 gltA citrate synthase — —
Escherichia coli ECRC101 1.00 OKFHMN_21705 ndk nucleoside-diphosphate kinase 1.00 OKFHMN_06960 gltA citrate synthase — —
Escherichia coli ECOR27 1.00 NOLOHH_13355 ndk nucleoside-diphosphate kinase 1.00 NOLOHH_23345 gltA citrate synthase — —
Escherichia coli ECRC98 1.00 JDDGAC_25380 ndk nucleoside-diphosphate kinase 1.00 JDDGAC_10615 gltA citrate synthase — —
Escherichia coli ECRC62 1.00 BNILDI_12155 ndk nucleoside-diphosphate kinase 1.00 BNILDI_21340 gltA citrate synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01191 Nucleoside diphosphate kinase 1.00 OHPLBJKB_02997 Citrate synthase low > 73
Escherichia coli ECRC102 1.00 NIAGMN_19475 ndk nucleoside-diphosphate kinase 1.00 NIAGMN_05010 gltA citrate synthase — —
Escherichia coli ECRC99 1.00 KEDOAH_06515 ndk nucleoside-diphosphate kinase 1.00 KEDOAH_21005 gltA citrate synthase — —
Escherichia coli BL21 1.00 ECD_02410 multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase 1.00 ECD_00680 citrate synthase — —
Escherichia coli ECOR38 0.99 HEPCGN_20825 ndk nucleoside-diphosphate kinase 0.99 HEPCGN_01275 gltA citrate synthase low > 85
Escherichia fergusonii Becca 0.99 EFB2_01372 Nucleoside diphosphate kinase 1.00 EFB2_03386 Citrate synthase low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14305 nucleoside-diphosphate kinase 1.00 ECOLIN_RS03835 citrate synthase low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF2415 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.97 GFF4634 Citrate synthase (si) (EC 2.3.3.1) low > 78
Klebsiella michiganensis M5al 0.96 BWI76_RS21100 nucleoside-diphosphate kinase 0.97 BWI76_RS08385 citrate (Si)-synthase 0.22 47
Enterobacter asburiae PDN3 0.95 EX28DRAFT_0125 nucleoside diphosphate kinase (EC 2.7.4.6) 0.97 EX28DRAFT_2272 citrate synthase (EC 2.3.3.1) low > 76
Enterobacter sp. TBS_079 0.95 MPMX20_03396 Nucleoside diphosphate kinase 0.97 MPMX20_01349 Citrate synthase low > 85
Erwinia tracheiphila SCR3 0.91 LU632_RS17820 ndk nucleoside-diphosphate kinase 0.90 LU632_RS16120 citrate synthase low > 74
Pantoea sp. MT58 0.90 IAI47_05035 nucleoside-diphosphate kinase 0.90 IAI47_13770 citrate synthase low > 76
Dickeya dadantii 3937 0.81 DDA3937_RS15485 nucleoside-diphosphate kinase 0.88 DDA3937_RS06435 citrate synthase — —
Serratia liquefaciens MT49 0.81 IAI46_19295 nucleoside-diphosphate kinase 0.86 IAI46_06250 citrate synthase low > 86
Dickeya dianthicola 67-19 0.81 HGI48_RS15595 nucleoside-diphosphate kinase 0.89 HGI48_RS06475 citrate synthase — —
Dickeya dianthicola ME23 0.80 DZA65_RS16670 nucleoside-diphosphate kinase 0.89 DZA65_RS06820 citrate synthase low > 75
Pectobacterium carotovorum WPP14 0.80 HER17_RS06080 nucleoside-diphosphate kinase 0.88 HER17_RS14955 citrate synthase 0.47 32
Rahnella sp. WP5 0.79 EX31_RS20530 nucleoside-diphosphate kinase 0.90 EX31_RS23415 citrate synthase low > 89
Alteromonas macleodii MIT1002 0.74 MIT1002_02793 Nucleoside diphosphate kinase 0.73 MIT1002_01943 Citrate synthase — —
Kangiella aquimarina DSM 16071 0.73 B158DRAFT_1148 nucleoside diphosphate kinase (EC 2.7.4.6) 0.68 B158DRAFT_1419 citrate synthase (EC 2.3.3.1) — —
Shewanella sp. ANA-3 0.73 Shewana3_2272 nucleoside diphosphate kinase (RefSeq) 0.76 Shewana3_1705 gltA type II citrate synthase (RefSeq) — —
Shewanella loihica PV-4 0.72 Shew_2310 nucleoside-diphosphate kinase (RefSeq) 0.73 Shew_1650 gltA type II citrate synthase (RefSeq) — —
Acinetobacter radioresistens SK82 0.71 MPMX26_00425 Nucleoside diphosphate kinase 0.67 MPMX26_00746 Citrate synthase — —
Shewanella amazonensis SB2B 0.71 Sama_1301 ndk nucleoside diphosphate kinase (RefSeq) 0.78 Sama_1422 gltA type II citrate synthase (RefSeq) — —
Shewanella oneidensis MR-1 0.71 SO2274 ndk nucleoside diphosphate kinase (NCBI ptt file) 0.75 SO1926 gltA citrate synthase (NCBI ptt file) — —
Marinobacter adhaerens HP15 0.70 HP15_1489 nucleoside diphosphate kinase 0.68 HP15_1516 type II citrate synthase — —
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_03925 nucleoside-diphosphate kinase 0.79 CSW01_10455 citrate synthase — —
Pseudomonas sp. S08-1 0.66 OH686_17510 Nucleoside diphosphate kinase 0.73 OH686_01995 citrate (Si)-synthase — —
Pseudomonas stutzeri RCH2 0.65 Psest_1258 Nucleoside diphosphate kinase 0.73 Psest_2499 citrate synthase I (hexameric type) — —
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.2738.1 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.62 Xcc-8004.1199.1 Citrate synthase (si) (EC 2.3.3.1) — —
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS00065 nucleoside-diphosphate kinase 0.59 LRK54_RS11820 citrate synthase — —
Rhodanobacter denitrificans MT42 0.64 LRK55_RS18060 nucleoside-diphosphate kinase 0.59 LRK55_RS11545 citrate synthase — —
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS05460 nucleoside-diphosphate kinase 0.59 ABZR86_RS11825 citrate synthase — —
Paraburkholderia graminis OAS925 0.64 ABIE53_002745 nucleoside-diphosphate kinase 0.68 ABIE53_004770 citrate synthase — —
Pseudomonas putida KT2440 0.64 PP_0849 Nucleoside diphosphate kinase 0.74 PP_4194 citrate synthase — —
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_07145 ndk nucleoside-diphosphate kinase 0.59 OKGIIK_12075 citrate synthase — —
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS13160 nucleoside diphosphate kinase 0.67 RR42_RS14430 type II citrate synthase — —
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_06610 nucleoside diphosphate kinase 0.74 AO356_19670 type II citrate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_3182 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.74 Pf6N2E2_5850 Citrate synthase (si) (EC 2.3.3.1) — —
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_00513 nucleoside diphosphate kinase 0.69 H281DRAFT_06117 citrate synthase — —
Pseudomonas sp. RS175 0.63 PFR28_00293 Nucleoside diphosphate kinase 0.74 PFR28_03101 Citrate synthase — —
Lysobacter sp. OAE881 0.63 ABIE51_RS09410 nucleoside-diphosphate kinase 0.59 ABIE51_RS17200 citrate synthase — —
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS12595 nucleoside diphosphate kinase 0.69 BPHYT_RS33920 type II citrate synthase — —
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_15870 nucleoside diphosphate kinase 0.74 AO353_01860 type II citrate synthase — —
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_4866 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.74 PfGW456L13_4274 Citrate synthase (si) (EC 2.3.3.1) — —
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_858 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.74 Pf1N1B4_3676 Citrate synthase (si) (EC 2.3.3.1) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_1244 nucleoside diphosphate kinase 0.73 Psyr_2004 citrate synthase — —
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_1244 nucleoside diphosphate kinase 0.73 Psyr_2004 citrate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS24820 nucleoside-diphosphate kinase 0.74 PFLU_RS08930 citrate (Si)-synthase — —
Pseudomonas simiae WCS417 0.61 PS417_23165 nucleoside diphosphate kinase 0.74 PS417_08870 type II citrate synthase — —
Variovorax sp. OAS795 0.61 ABID97_RS14205 nucleoside-diphosphate kinase 0.65 ABID97_RS08480 citrate synthase — —
Pseudomonas fluorescens SBW25 0.61 PFLU_RS24820 nucleoside-diphosphate kinase 0.74 PFLU_RS08930 citrate (Si)-synthase — —
Variovorax sp. SCN45 0.61 GFF991 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.65 GFF3894 Citrate synthase (si) (EC 2.3.3.1) — —
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS05960 nucleoside-diphosphate kinase 0.69 QEN71_RS17600 citrate synthase — —
Rhodospirillum rubrum S1H 0.60 Rru_A2169 Nucleoside-diphosphate kinase (NCBI) 0.66 Rru_A1600 Citrate synthase I (NCBI) — —
Dechlorosoma suillum PS 0.59 Dsui_3146 nucleoside diphosphate kinase 0.66 Dsui_2216 citrate synthase I, hexameric type — —
Castellaniella sp019104865 MT123 0.58 ABCV34_RS02605 nucleoside-diphosphate kinase 0.66 ABCV34_RS01710 citrate synthase — —
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS14815 nucleoside diphosphate kinase 0.68 HSERO_RS14890 type II citrate synthase — —
Sphingomonas koreensis DSMZ 15582 0.57 Ga0059261_0873 nucleoside diphosphate kinase (EC 2.7.4.6) 0.66 Ga0059261_0941 citrate synthase (EC 2.3.3.1) — —
Phaeobacter inhibens DSM 17395 0.57 PGA1_c19750 nucleoside diphosphate kinase Ndk 0.68 PGA1_c16970 citrate synthase GltA — —
Ralstonia solanacearum PSI07 0.57 RPSI07_RS18120 nucleoside-diphosphate kinase 0.64 RPSI07_RS14690 citrate (Si)-synthase — —
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS10895 nucleoside-diphosphate kinase 0.64 ABZR87_RS14545 citrate synthase — —
Ralstonia solanacearum UW163 0.56 UW163_RS12720 nucleoside-diphosphate kinase 0.64 UW163_RS11100 citrate (Si)-synthase — —
Ralstonia solanacearum IBSBF1503 0.56 RALBFv3_RS15255 nucleoside-diphosphate kinase 0.64 RALBFv3_RS02625 citrate (Si)-synthase — —
Magnetospirillum magneticum AMB-1 0.56 AMB_RS18020 nucleoside-diphosphate kinase 0.67 AMB_RS14105 citrate (Si)-synthase — —
Ralstonia solanacearum GMI1000 0.56 RS_RS06065 nucleoside-diphosphate kinase 0.63 RS_RS10005 citrate (Si)-synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.56 GFF4867 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.65 GFF3365 Citrate synthase (si) (EC 2.3.3.1) — —
Acidovorax sp. GW101-3H11 0.56 Ac3H11_1790 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.63 Ac3H11_3161 Citrate synthase (si) (EC 2.3.3.1) — —
Dinoroseobacter shibae DFL-12 0.55 Dshi_1350 Nucleoside-diphosphate kinase (RefSeq) 0.64 Dshi_1806 citrate synthase I (RefSeq) — —
Azospirillum brasilense Sp245 0.54 AZOBR_RS16305 nucleoside diphosphate kinase 0.69 AZOBR_RS25925 type II citrate synthase — —
Agrobacterium fabrum C58 0.54 Atu1122 nucleoside diphosphate kinase 0.70 Atu1392 citrate synthase — —
Sinorhizobium meliloti 1021 0.54 SMc00595 nucleoside diphosphate kinase 0.69 SMc02087 type II citrate synthase — —
Azospirillum sp. SherDot2 0.54 MPMX19_01455 Nucleoside diphosphate kinase 0.71 MPMX19_01007 Citrate synthase — —
Rhizobium sp. OAE497 0.52 ABIE40_RS06465 nucleoside-diphosphate kinase 0.16 ABIE40_RS09610 citrate synthase/methylcitrate synthase — —
Rhodopseudomonas palustris CGA009 0.52 TX73_015810 nucleoside-diphosphate kinase 0.66 TX73_015065 citrate synthase — —
Bosea sp. OAE506 0.51 ABIE41_RS17075 nucleoside-diphosphate kinase 0.68 ABIE41_RS17520 citrate synthase — —
Synechococcus elongatus PCC 7942 0.49 Synpcc7942_2497 ndk nucleoside diphosphate kinase 0.30 Synpcc7942_0612 gltA methylcitrate synthase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.48 A4249_RS08235 nucleoside-diphosphate kinase 0.64 A4249_RS06195 citrate synthase — —
Caulobacter crescentus NA1000 0.48 CCNA_01770 nucleoside diphosphate kinase 0.65 CCNA_01983 citrate synthase — —
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_01770 nucleoside diphosphate kinase 0.65 CCNA_01983 citrate synthase — —
Pedobacter sp. GW460-11-11-14-LB5 0.45 CA265_RS24780 nucleoside-diphosphate kinase 0.49 CA265_RS08845 citrate (Si)-synthase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.45 Echvi_0995 Nucleoside diphosphate kinase 0.52 Echvi_3057 citrate synthase I (hexameric type) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.44 CA264_18820 nucleoside-diphosphate kinase 0.50 CA264_07120 citrate (Si)-synthase — —
Mycobacterium tuberculosis H37Rv 0.42 Rv2445c Probable nucleoside diphosphate kinase NdkA (NDK) (NDP kinase) (nucleoside-2-P kinase) 0.52 Rv0896 Probable citrate synthase I GltA2 — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.41 ABZR88_RS21635 nucleoside-diphosphate kinase 0.49 ABZR88_RS03955 citrate synthase — —

Not shown: 8 genomes with orthologs for b2518 only; 1 genomes with orthologs for b0720 only