Homologs of PP_4532 from Pseudomonas putida KT2440

ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis
SEED: ATP-dependent RNA helicase SrmB

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_4532 ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis strong 100 100
o Pseudomonas sp. BP01 JOY50_RS01230 DEAD/DEAH box helicase insig. 98 100
o Pseudomonas sp. SVBP6 COO64_RS21930 DEAD/DEAH box helicase insig. 87 100
o Pseudomonas sp. DMC3 GFF2355 ATP-dependent RNA helicase RhlE no data 79 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4451 ATP-dependent RNA helicase SrmB strong 79 100
o Pseudomonas syringae pv. syringae B728a Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal sig. 78 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 78 100
o Pseudomonas fluorescens FW300-N2C3 AO356_04210 RNA helicase no data 78 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2675 ATP-dependent RNA helicase SrmB insig. 78 100
o Pseudomonas fluorescens FW300-N2E3 AO353_18305 RNA helicase sig. 77 100
o Pseudomonas sp. RS175 PFR28_00756 ATP-dependent RNA helicase RhlE insig. 78 100
o Pseudomonas simiae WCS417 PS417_20275 RNA helicase no data 77 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_543 ATP-dependent RNA helicase SrmB no data 76 100
o Pseudomonas orientalis W4I3 QF045_RS22365 DEAD/DEAH box helicase insig. 77 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04249 ATP-dependent RNA helicase RhlE insig. 77 100
o Pseudomonas fluorescens SBW25 PFLU_RS22195 DEAD/DEAH box helicase strong 77 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS22195 DEAD/DEAH box helicase strong 77 100
o Pseudomonas segetis P6 ACVTMO_RS16090 DEAD/DEAH box helicase no data 75 100
o Pseudomonas stutzeri RCH2 Psest_1627 Superfamily II DNA and RNA helicases strong 74 100
o Pseudomonas sp. S08-1 OH686_05415 ATP-dependent RNA helicase SrmB cofit 74 100
o Pseudomonas aeruginosa PA14 IKLFDK_17790 RNA helicase insig. 71 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS41480 DEAD/DEAH box helicase no data 71 100
o Pseudomonas aeruginosa MRSN321 DY961_RS15590 DEAD/DEAH box helicase strong 71 100
o Kangiella aquimarina DSM 16071 B158DRAFT_1312 Superfamily II DNA and RNA helicases insig. 44 98
o Shewanella oneidensis MR-1 SO2838 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 41 93
  Herbaspirillum seropedicae SmR1 HSERO_RS17855 DEAD/DEAH box helicase sig. 41 96
o Shewanella sp. ANA-3 Shewana3_2606 DEAD/DEAH box helicase domain-containing protein (RefSeq) no data 42 87
o Pantoea sp. MT58 IAI47_04835 ATP-dependent RNA helicase SrmB strong 41 94
o Shewanella amazonensis SB2B Sama_1273 DEAD/DEAH box helicase-like protein (RefSeq) no data 39 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS14725 ATP-dependent RNA helicase SrmB strong 40 95
  Pseudomonas segetis P6 ACVTMO_RS05445 DEAD/DEAH box helicase sig. 45 83
o Erwinia amylovora T8 OLJFJH_10200 ATP-dependent RNA helicase SrmB strong 40 94
  Ralstonia solanacearum PSI07 RPSI07_RS21325 RNA helicase sig. 39 95
o Serratia liquefaciens MT49 IAI46_19600 ATP-dependent RNA helicase SrmB strong 42 95
  Ralstonia solanacearum GMI1000 RS_RS02695 RNA helicase sig. 42 84
  Vibrio cholerae E7946 ATCC 55056 CSW01_18020 DEAD/DEAH box helicase cofit 41 91
  Ralstonia sp. UNC404CL21Col ABZR87_RS07850 DEAD/DEAH box helicase sig. 42 84
o Shewanella loihica PV-4 Shew_2452 DEAD/DEAH box helicase domain-containing protein (RefSeq) no data 40 100
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11875 RNA helicase strong 42 84
  Ralstonia solanacearum UW163 UW163_RS01715 RNA helicase insig. 42 84
  Vibrio cholerae E7946 ATCC 55056 CSW01_03475 ATP-dependent RNA helicase SrmB cofit 43 84
  Cupriavidus basilensis FW507-4G11 RR42_RS02870 RNA helicase sig. 38 97
  Pseudomonas sp. RS175 PFR28_03825 ATP-dependent RNA helicase RhlE insig. 39 99
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5046 ATP-dependent RNA helicase PA3950 strong 39 99
  Pseudomonas fluorescens FW300-N2C3 AO356_15530 DEAD/DEAH box helicase sig. 39 99
  Ralstonia sp. UNC404CL21Col ABZR87_RS15540 DEAD/DEAH box helicase sig. 41 85
  Ralstonia solanacearum PSI07 RPSI07_RS13580 ATP-dependent helicase sig. 41 85
  Pseudomonas fluorescens FW300-N2E3 AO353_06265 DEAD/DEAH box helicase strong 39 99
  Pseudomonas aeruginosa PA14 IKLFDK_20375 DEAD/DEAH box helicase sig. 43 84
  Pseudomonas aeruginosa PUPa3 DQ20_RS48430 DEAD/DEAH box helicase sig. 43 84
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF222 ATP-dependent RNA helicase Bcep18194_A5658 insig. 42 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS24485 DEAD/DEAH box helicase insig. 43 83
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_01260 srmB ATP-dependent RNA helicase SrmB strong 42 93
o Erwinia tracheiphila SCR3 LU632_RS15440 srmB ATP-dependent RNA helicase SrmB cofit 42 93
  Vibrio cholerae E7946 ATCC 55056 CSW01_14335 ATP-dependent helicase insig. 40 90
  Pseudomonas aeruginosa MRSN321 DY961_RS13105 DEAD/DEAH box helicase insig. 43 84
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03650 ATP-dependent helicase insig. 41 85
  Ralstonia solanacearum UW163 UW163_RS10020 ATP-dependent helicase insig. 41 85
  Azospirillum sp. SherDot2 MPMX19_02011 RNA helicase CrhR strong 41 94
  Paraburkholderia graminis OAS925 ABIE53_001438 ATP-dependent RNA helicase RhlE strong 42 83
  Ralstonia solanacearum GMI1000 RS_RS11095 ATP-dependent helicase sig. 41 85
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04222 ATP-dependent RNA helicase RhlE sig. 41 84
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2736 ATP-dependent RNA helicase PA3950 sig. 39 99
  Acidovorax sp. GW101-3H11 Ac3H11_1125 ATP-dependent RNA helicase Bcep18194_A5658 no data 42 83
  Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 41 84
o Pectobacterium carotovorum WPP14 HER17_RS05765 ATP-dependent RNA helicase SrmB cofit 40 90
  Pseudomonas orientalis W4I3 QF045_RS26765 DEAD/DEAH box helicase insig. 39 96
o Dickeya dadantii 3937 DDA3937_RS15780 ATP-dependent RNA helicase SrmB strong 42 90
  Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 41 84
  Marinobacter adhaerens HP15 HP15_3607 DEAD/DEAH box helicase domain protein insig. 41 88
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05046 ATP-dependent RNA helicase RhlE cofit 39 96
  Dechlorosoma suillum PS Dsui_3406 DNA/RNA helicase, superfamily II insig. 38 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2382 ATP-dependent RNA helicase RhlE sig. 42 83
  Pantoea sp. MT58 IAI47_13435 ATP-dependent RNA helicase RhlE insig. 42 84
  Shewanella amazonensis SB2B Sama_2742 ATP-dependent RNA helicase SrmB (RefSeq) cofit 42 85
  Cupriavidus basilensis FW507-4G11 RR42_RS14810 DEAD/DEAH box helicase insig. 41 83
  Methylophilus sp. DMC18 GFF1281 ATP-dependent RNA helicase RhlE cofit 38 93
  Pseudomonas sp. DMC3 GFF174 ATP-dependent RNA helicase RhlE cofit 42 83
o Alteromonas macleodii MIT1002 MIT1002_00941 ATP-dependent RNA helicase SrmB no data 42 85
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1048 ATP-dependent RNA helicase RhlE sig. 42 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 41 84
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1409 ATP-dependent RNA helicase PA3950 insig. 38 99
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05436 ATP-dependent RNA helicase RhlE cofit 42 83
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS03875 ATP-dependent RNA helicase RhlE cofit 41 84
o Rahnella sp. WP5 EX31_RS21785 ATP-dependent RNA helicase SrmB cofit 40 95
  Acidovorax sp. GW101-3H11 Ac3H11_386 ATP-dependent RNA helicase RhlE insig. 41 84
  Pseudomonas orientalis W4I3 QF045_RS00920 DEAD/DEAH box helicase cofit 42 83
  Pseudomonas sp. DMC3 GFF3924 ATP-dependent RNA helicase RhlE cofit 42 84
  Castellaniella sp019104865 MT123 ABCV34_RS07925 DEAD/DEAH box helicase cofit 42 83
  Pseudomonas fluorescens SBW25 PFLU_RS26425 DEAD/DEAH box helicase insig. 39 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26425 DEAD/DEAH box helicase sig. 39 96
  Pseudomonas sp. BP01 JOY50_RS21825 DEAD/DEAH box helicase insig. 43 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00308 Superfamily II DNA and RNA helicase strong 42 83
  Shewanella sp. ANA-3 Shewana3_3336 ATP-dependent RNA helicase SrmB (RefSeq) strong 41 85
  Bosea sp. OAE506 ABIE41_RS22380 DEAD/DEAH box helicase insig. 42 82
o Dickeya dianthicola ME23 DZA65_RS16945 ATP-dependent RNA helicase SrmB cofit 41 90
  Azospirillum sp. SherDot2 MPMX19_06125 RNA helicase CrhR insig. 43 82
  Pseudomonas sp. RS175 PFR28_04204 ATP-dependent RNA helicase RhlE sig. 43 83
  Pseudomonas fluorescens SBW25 PFLU_RS28180 DEAD/DEAH box helicase cofit 42 83
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28180 DEAD/DEAH box helicase sig. 42 83
  Pseudomonas simiae WCS417 PS417_26525 DEAD/DEAH box helicase strong 42 83
  Pseudomonas fluorescens FW300-N2E3 AO353_08030 DEAD/DEAH box helicase sig. 42 83
  Burkholderia phytofirmans PsJN BPHYT_RS06155 DEAD/DEAH box helicase strong 42 83
o Dickeya dianthicola 67-19 HGI48_RS15865 ATP-dependent RNA helicase SrmB cofit 41 90
  Herbaspirillum seropedicae SmR1 HSERO_RS08565 RNA helicase insig. 40 84
  Pseudomonas segetis P6 ACVTMO_RS03195 DEAD/DEAH box helicase strong 37 100
o Enterobacter sp. TBS_079 MPMX20_03447 ATP-dependent RNA helicase SrmB strong 41 96
  Methylophilus sp. DMC18 GFF1280 ATP-dependent RNA helicase RhlE insig. 41 89
  Pseudomonas simiae WCS417 PS417_24500 DEAD/DEAH box helicase strong 41 88
  Cupriavidus basilensis FW507-4G11 RR42_RS14720 RNA helicase no data 35 97
  Pseudomonas stutzeri RCH2 Psest_3505 Superfamily II DNA and RNA helicases strong 42 83
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4635 ATP-dependent RNA helicase RhlE strong 42 83
  Shewanella oneidensis MR-1 SO0947 srmB ATP-dependent RNA helicase SrmB (NCBI ptt file) strong 41 85
  Pseudomonas fluorescens FW300-N2C3 AO356_13590 DEAD/DEAH box helicase sig. 42 83
o Enterobacter asburiae PDN3 EX28DRAFT_0069 Superfamily II DNA and RNA helicases insig. 40 96
  Dickeya dadantii 3937 DDA3937_RS08645 ATP-dependent RNA helicase RhlE sig. 42 83
  Pseudomonas syringae pv. syringae B728a Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal insig. 41 83
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal insig. 41 83
  Variovorax sp. OAS795 ABID97_RS22030 DEAD/DEAH box helicase strong 38 97
  Klebsiella pneumoniae MKP103 KDGMDA_17180 ATP-dependent RNA helicase RhlE sig. 42 84
  Klebsiella pneumoniae MRSN742743 KFA93_RS01465 rhlE;go_function=RNA ATP-dependent RNA helicase RhlE cofit 42 84
  Dechlorosoma suillum PS Dsui_3174 DNA/RNA helicase, superfamily II insig. 40 86
  Pseudomonas putida KT2440 PP_4766 ATP-dependent RNA helicase strong 42 83
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2104 ATP-dependent RNA helicase SrmB insig. 42 90
  Rahnella sp. WP5 EX31_RS23775 ATP-dependent RNA helicase RhlE insig. 42 83
  Shewanella loihica PV-4 Shew_0604 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 39 87
  Pseudomonas sp. SVBP6 COO64_RS15390 DEAD/DEAH box helicase insig. 42 83
  Pseudomonas syringae pv. syringae B728a Psyr_4297 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 41 88
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4297 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal strong 41 88
  Pseudomonas sp. S08-1 OH686_16620 ATP-dependent RNA helicase insig. 42 83
  Dickeya dianthicola 67-19 HGI48_RS08785 ATP-dependent RNA helicase RhlE cofit 42 83
  Dickeya dianthicola ME23 DZA65_RS09075 ATP-dependent RNA helicase RhlE insig. 42 83
  Erwinia amylovora T8 OLJFJH_16685 ATP-dependent RNA helicase RhlE cofit 42 84
  Pseudomonas sp. SVBP6 COO64_RS17470 DEAD/DEAH box helicase insig. 41 83
  Castellaniella sp019104865 MT123 ABCV34_RS12515 DEAD/DEAH box helicase cofit 39 93
  Pseudomonas stutzeri RCH2 Psest_0312 Superfamily II DNA and RNA helicases strong 39 94
  Lysobacter sp. OAE881 ABIE51_RS06650 DEAD/DEAH box helicase insig. 38 95
  Kangiella aquimarina DSM 16071 B158DRAFT_0320 Superfamily II DNA and RNA helicases insig. 42 84
  Pseudomonas sp. BP01 JOY50_RS09795 DEAD/DEAH box helicase insig. 41 83
  Variovorax sp. SCN45 GFF1917 ATP-dependent RNA helicase Bcep18194_A5658 strong 41 83
  Shewanella amazonensis SB2B Sama_0808 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 40 84
  Shewanella loihica PV-4 Shew_0950 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 40 84
  Erwinia tracheiphila SCR3 LU632_RS09215 rhlE ATP-dependent RNA helicase RhlE cofit 37 97
  Enterobacter asburiae PDN3 EX28DRAFT_2194 Superfamily II DNA and RNA helicases insig. 42 83
  Pseudomonas putida KT2440 PP_4980 ATP-dependent RNA helicase sig. 41 83
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3530 ATP-dependent RNA helicase RhlE cofit 40 85
  Shewanella loihica PV-4 Shew_0767 ATP-dependent RNA helicase SrmB (RefSeq) strong 40 87
  Herbaspirillum seropedicae SmR1 HSERO_RS17155 RNA helicase insig. 37 88
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_19640 rhlE ATP-dependent RNA helicase RhlE cofit 36 97
  Pseudomonas sp. S08-1 OH686_10835 ATP-dependent RNA helicase RhlE cofit 41 83
  Klebsiella michiganensis M5al BWI76_RS08915 ATP-dependent RNA helicase RhlE sig. 41 83
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS07310 DEAD/DEAH box helicase insig. 43 78
  Shewanella oneidensis MR-1 SO1383 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) strong 38 83
  Dechlorosoma suillum PS Dsui_0309 DNA/RNA helicase, superfamily II insig. 43 83
  Bacteroides ovatus ATCC 8483 BACOVA_02566 DEAD/DEAH box helicase sig. 39 90
  Burkholderia phytofirmans PsJN BPHYT_RS12280 RNA helicase insig. 38 87
  Variovorax sp. OAS795 ABID97_RS21170 DEAD/DEAH box helicase sig. 41 83
  Paraburkholderia graminis OAS925 ABIE53_002535 superfamily II DNA/RNA helicase strong 39 84
  Rhodanobacter denitrificans MT42 LRK55_RS02395 DEAD/DEAH box helicase insig. 42 78
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02640 DEAD/DEAH box helicase sig. 42 78
  Enterobacter sp. TBS_079 MPMX20_01425 ATP-dependent RNA helicase RhlE insig. 41 83
  Klebsiella pneumoniae MKP103 KDGMDA_28495 ATP-dependent RNA helicase SrmB cofit 41 95
  Klebsiella pneumoniae MRSN742743 KFA93_RS04675 srmB;go_function=RNA ATP-dependent RNA helicase SrmB strong 41 95
  Alteromonas macleodii MIT1002 MIT1002_03342 ATP-dependent RNA helicase RhlE insig. 40 84
  Xanthobacter sp. DMC5 GFF3462 ATP-dependent RNA helicase RhlE insig. 40 83
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16030 DEAD/DEAH box helicase insig. 40 83
  Ralstonia solanacearum GMI1000 RS_RS04735 RNA helicase insig. 38 84
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08975 DEAD/DEAH box helicase insig. 42 79
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14000 ATP-dependent helicase insig. 38 84
  Ralstonia solanacearum UW163 UW163_RS15810 ATP-dependent helicase insig. 38 84
  Variovorax sp. SCN45 GFF6779 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) insig. 40 84
  Methylophilus sp. DMC18 GFF250 ATP-dependent RNA helicase RhlE insig. 39 83
  Ralstonia sp. UNC404CL21Col ABZR87_RS09700 DEAD/DEAH box helicase strong 38 84
  Pectobacterium carotovorum WPP14 HER17_RS13325 ATP-dependent RNA helicase RhlE insig. 41 84
  Shewanella sp. ANA-3 Shewana3_0810 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 40 85
  Shewanella oneidensis MR-1 SO3783 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 40 85
  Rhodospirillum rubrum S1H Rru_A1915 DEAD/DEAH box helicase (NCBI) cofit 39 88
  Ralstonia solanacearum PSI07 RPSI07_RS19465 ATP-dependent helicase insig. 39 84
  Shewanella amazonensis SB2B Sama_2687 DEAD-box ATP dependent DNA helicase (RefSeq) insig. 38 95
  Shewanella sp. ANA-3 Shewana3_2988 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 38 83
  Klebsiella michiganensis M5al BWI76_RS21370 ATP-dependent RNA helicase SrmB insig. 41 90
  Serratia liquefaciens MT49 IAI46_06620 ATP-dependent RNA helicase RhlE cofit 41 83
  Rhodopseudomonas palustris CGA009 TX73_019020 DEAD/DEAH box helicase insig. 40 82
  Paraburkholderia sabiae LMG 24235 QEN71_RS32150 DEAD/DEAH box helicase insig. 38 100
  Azospirillum sp. SherDot2 MPMX19_02097 ATP-dependent RNA helicase RhlE insig. 39 88
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00581 Superfamily II DNA and RNA helicase no data 39 84
  Pseudomonas aeruginosa MRSN321 DY961_RS22125 DEAD/DEAH box helicase strong 40 83
  Pseudomonas aeruginosa PA14 IKLFDK_23280 DEAD/DEAH box helicase strong 40 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS06275 DEAD/DEAH box helicase insig. 38 84
  Pseudomonas aeruginosa PUPa3 DQ20_RS37180 DEAD/DEAH box helicase strong 36 99
  Bacteroides thetaiotaomicron VPI-5482 BT0831 ATP-dependent RNA helicase (NCBI ptt file) strong 40 83
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF696 ATP-dependent RNA helicase RhlE insig. 40 83
  Phocaeicola dorei CL03T12C01 ABI39_RS16490 DEAD/DEAH box helicase strong 37 96
  Paraburkholderia graminis OAS925 ABIE53_005853 ATP-dependent RNA helicase RhlE insig. 41 83
  Bacteroides stercoris CC31F HMPREF1181_RS03715 DEAD/DEAH box helicase insig. 40 82
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS01240 DEAD/DEAH box helicase sig. 37 95
  Sphingobium sp. HT1-2 GFF3945 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) cofit 36 92
  Alteromonas macleodii MIT1002 MIT1002_01999 ATP-dependent RNA helicase SrmB no data 35 99
  Bacteroides thetaiotaomicron VPI-5482 BT1885 putative ATP-dependent RNA helicase (NCBI ptt file) strong 38 83
o Escherichia coli ECRC62 BNILDI_11835 srmB ATP-dependent RNA helicase SrmB cofit 42 86
o Escherichia coli BL21 ECD_02470 ATP-dependent RNA helicase strong 42 88
o Escherichia fergusonii Becca EFB2_01320 ATP-dependent RNA helicase SrmB strong 42 88
o Escherichia coli ECOR27 NOLOHH_13035 srmB ATP-dependent RNA helicase SrmB strong 42 88
  Escherichia coli ECOR38 HEPCGN_20505 srmB ATP-dependent RNA helicase SrmB strong 42 88
o Escherichia coli ECRC100 OKFHMN_21360 srmB ATP-dependent RNA helicase SrmB cofit 42 88
o Escherichia coli ECRC101 MCAODC_11890 srmB ATP-dependent RNA helicase SrmB strong 42 88
o Escherichia coli ECRC102 NIAGMN_19130 srmB ATP-dependent RNA helicase SrmB cofit 42 88
o Escherichia coli ECRC98 JDDGAC_25025 srmB ATP-dependent RNA helicase SrmB strong 42 88
o Escherichia coli ECRC99 KEDOAH_06860 srmB ATP-dependent RNA helicase SrmB no data 42 88
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01131 ATP-dependent RNA helicase SrmB strong 42 88
o Escherichia coli Nissle 1917 ECOLIN_RS14580 ATP-dependent RNA helicase SrmB sig. 42 88
  Escherichia coli ECOR38 HEPCGN_01750 rhlE ATP-dependent RNA helicase RhlE insig. 40 84
o Escherichia coli BW25113 b2576 srmB ATP-dependent RNA helicase (NCBI) strong 42 88
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4527.1 ATP-dependent RNA helicase RhlE strong 39 96
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02916 ATP-dependent RNA helicase RhlE insig. 40 84
  Xanthobacter sp. DMC5 GFF1339 ATP-dependent RNA helicase RhlE insig. 40 82
  Escherichia coli BL21 ECD_00764 ATP-dependent RNA helicase insig. 40 84
  Escherichia coli ECOR27 NOLOHH_22645 rhlE ATP-dependent RNA helicase RhlE insig. 40 84
  Escherichia coli ECRC100 OKFHMN_06290 rhlE ATP-dependent RNA helicase RhlE cofit 40 84
  Escherichia coli ECRC101 MCAODC_25505 rhlE ATP-dependent RNA helicase RhlE insig. 40 84
  Escherichia coli ECRC102 NIAGMN_04335 rhlE ATP-dependent RNA helicase RhlE cofit 40 84
  Escherichia coli ECRC62 BNILDI_20925 rhlE ATP-dependent RNA helicase RhlE insig. 40 84
  Escherichia coli ECRC98 JDDGAC_09925 rhlE ATP-dependent RNA helicase RhlE sig. 40 84
  Escherichia coli ECRC99 KEDOAH_21620 rhlE ATP-dependent RNA helicase RhlE no data 40 84
  Escherichia coli Nissle 1917 ECOLIN_RS04245 ATP-dependent RNA helicase RhlE insig. 40 84
  Escherichia coli BW25113 b0797 rhlE RNA helicase (NCBI) sig. 40 84
  Bacteroides stercoris CC31F HMPREF1181_RS14365 DEAD/DEAH box helicase insig. 36 95
  Escherichia fergusonii Becca EFB2_03308 ATP-dependent RNA helicase RhlE insig. 40 84
  Burkholderia phytofirmans PsJN BPHYT_RS35415 DEAD/DEAH box helicase insig. 40 83
  Shewanella sp. ANA-3 Shewana3_2376 DEAD/DEAH box helicase domain-containing protein (RefSeq) cofit 39 87
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0964 Superfamily II DNA and RNA helicases sig. 38 88
  Shewanella oneidensis MR-1 SO3125 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 40 90
  Vibrio cholerae E7946 ATCC 55056 CSW01_07055 ATP-dependent helicase insig. 41 84
  Shewanella sp. ANA-3 Shewana3_1422 4a-hydroxytetrahydrobiopterin dehydratase (RefSeq) no data 39 90
  Shewanella sp. ANA-3 Shewana3_1162 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 41 80
  Azospirillum sp. SherDot2 MPMX19_00976 ATP-dependent RNA helicase RhlE insig. 40 83
  Castellaniella sp019104865 MT123 ABCV34_RS13580 DEAD/DEAH box helicase sig. 38 94
  Bacteroides ovatus ATCC 8483 BACOVA_01521 DEAD/DEAH box helicase insig. 38 82
  Caulobacter crescentus NA1000 CCNA_00878 ATP-dependent RNA helicase cofit 38 85
  Caulobacter crescentus NA1000 Δfur CCNA_00878 ATP-dependent RNA helicase cofit 38 85
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3600 Superfamily II DNA and RNA helicases sig. 35 97
  Alteromonas macleodii MIT1002 MIT1002_00666 Cold-shock DEAD box protein A strong 40 83
  Shewanella oneidensis MR-1 SO2571 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 38 84
  Shewanella loihica PV-4 Shew_2777 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 38 100
  Sinorhizobium meliloti 1021 SMc00522 ATP-dependent RNA helicase strong 38 95
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS00535 DEAD/DEAH box helicase no data 37 82
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16115 DEAD/DEAH box helicase sig. 39 83
  Shewanella oneidensis MR-1 SO3388 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 38 90
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1574 Superfamily II DNA and RNA helicases strong 38 93
  Desulfovibrio vulgaris Hildenborough JW710 DVU3310 deaD ATP-dependent RNA helicase, DEAD/DEAH family (TIGR) strong 41 84