Homologs of IAI47_12105 from Pantoea sp. MT58

23S rRNA pseudouridine(955/2504/2580) synthase RluC
SEED: Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase C

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pantoea sp. MT58 IAI47_12105 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 100 100
o Escherichia coli ECRC101 OKFHMN_03615 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 85 100
o Escherichia coli ECRC101 MCAODC_22975 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 85 100
o Escherichia coli ECRC102 NIAGMN_24215 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC no data 85 100
o Escherichia coli ECRC98 JDDGAC_07275 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC no data 85 100
o Escherichia coli ECRC99 KEDOAH_24140 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC no data 85 100
o Escherichia coli BL21 ECD_01082 23S rRNA pseudouridine(955,2504,2580) synthase strong 84 100
o Escherichia fergusonii Becca EFB2_02889 Ribosomal large subunit pseudouridine synthase C insig. 84 100
o Escherichia coli ECOR27 NOLOHH_21145 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 84 100
o Escherichia coli ECOR38 HEPCGN_23865 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 84 100
o Escherichia coli ECRC62 BNILDI_19305 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 84 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02580 Ribosomal large subunit pseudouridine synthase C strong 84 100
o Escherichia coli BW25113 b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) strong 84 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3366 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) cofit 84 100
o Escherichia coli Nissle 1917 ECOLIN_RS06280 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 84 100
o Erwinia tracheiphila SCR3 LU632_RS14855 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 86 99
o Enterobacter asburiae PDN3 EX28DRAFT_1844 pseudouridine synthase, RluA family insig. 84 99
o Klebsiella michiganensis M5al BWI76_RS11050 23S rRNA pseudouridine(955/2504/2580) synthase strong 83 100
o Enterobacter sp. TBS_079 MPMX20_01766 Ribosomal large subunit pseudouridine synthase C sig. 84 96
o Rahnella sp. WP5 EX31_RS24400 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 82 99
o Pectobacterium carotovorum WPP14 HER17_RS08615 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 80 100
o Dickeya dadantii 3937 DDA3937_RS13155 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 81 99
o Dickeya dianthicola ME23 DZA65_RS13690 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 80 99
o Dickeya dianthicola 67-19 HGI48_RS13220 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 80 100
o Serratia liquefaciens MT49 IAI46_09755 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 80 99
o Shewanella loihica PV-4 Shew_1594 RluA family pseudouridine synthase (RefSeq) sig. 67 96
o Shewanella amazonensis SB2B Sama_1988 pseudouridylate synthase (RefSeq) strong 67 97
o Shewanella sp. ANA-3 Shewana3_2566 ribosomal large subunit pseudouridine synthase C (RefSeq) sig. 65 99
o Alteromonas macleodii MIT1002 MIT1002_01725 Ribosomal large subunit pseudouridine synthase C insig. 67 98
o Vibrio cholerae E7946 ATCC 55056 CSW01_10130 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 64 97
o Pseudomonas syringae pv. syringae B728a Psyr_1639 ribosomal large subunit pseudouridine synthase C sig. 63 97
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1639 ribosomal large subunit pseudouridine synthase C insig. 63 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5944 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 61 97
o Pseudomonas fluorescens FW300-N2C3 AO356_20125 23S rRNA pseudouridylate synthase strong 61 97
o Pseudomonas putida KT2440 PP_1906 ribosomal large subunit pseudouridine synthase C strong 61 98
o Pseudomonas sp. RS175 PFR28_03018 Ribosomal large subunit pseudouridine synthase C sig. 60 97
o Pseudomonas simiae WCS417 PS417_21480 23S rRNA pseudouridylate synthase strong 60 97
o Pseudomonas fluorescens SBW25 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 60 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 60 97
o Pseudomonas stutzeri RCH2 Psest_1680 pseudouridine synthase, RluA family no data 60 98
o Pseudomonas sp. S08-1 OH686_22095 LSU rRNA pseudouridine(955/2504/2580) synthase cofit 59 98
o Pseudomonas fluorescens FW300-N2E3 AO353_01405 23S rRNA pseudouridylate synthase strong 59 97
o Kangiella aquimarina DSM 16071 B158DRAFT_1770 ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) insig. 60 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2097 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 60 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_459 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) no data 59 97
o Marinobacter adhaerens HP15 HP15_2221 pseudouridine synthase, RluA family sig. 56 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS04500 RluA family pseudouridine synthase cofit 53 96
o Paraburkholderia graminis OAS925 ABIE53_003058 23S rRNA pseudouridine955/2504/2580 synthase sig. 52 97
o Cupriavidus basilensis FW507-4G11 RR42_RS14155 pseudouridine synthase strong 53 98
o Variovorax sp. SCN45 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) insig. 50 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS10090 RluA family pseudouridine synthase sig. 53 97
o Burkholderia phytofirmans PsJN BPHYT_RS14480 ribosomal large subunit pseudouridine synthase C sig. 52 97
o Dechlorosoma suillum PS Dsui_2437 pseudouridine synthase, RluA family strong 52 95
o Herbaspirillum seropedicae SmR1 HSERO_RS09415 ribosomal large subunit pseudouridine synthase C strong 51 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04340 23S rRNA pseudouridine955/2504/2580 synthase insig. 51 97
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14375 RluA family pseudouridine synthase strong 52 97
o Ralstonia solanacearum UW163 UW163_RS11840 RluA family pseudouridine synthase insig. 52 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF121 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) cofit 51 95
o Rhodanobacter sp. FW510-T8 OKGIIK_07405 rluA 23S rRNA pseudouridine(955/2504/2580) synthase cofit 53 97
o Rhodanobacter denitrificans MT42 LRK55_RS17750 RluA family pseudouridine synthase strong 53 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS17895 RluA family pseudouridine synthase strong 53 97
o Ralstonia solanacearum GMI1000 RS_RS05155 RluA family pseudouridine synthase strong 53 96
o Ralstonia solanacearum PSI07 RPSI07_RS19085 RluA family pseudouridine synthase strong 53 96
o Lysobacter sp. OAE881 ABIE51_RS11800 RluA family pseudouridine synthase cofit 55 94
o Acinetobacter radioresistens SK82 MPMX26_00317 Ribosomal large subunit pseudouridine synthase C insig. 50 97
o Acidovorax sp. GW101-3H11 Ac3H11_1590 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 50 92
o Variovorax sp. OAS795 ABID97_RS08250 RluA family pseudouridine synthase strong 50 98
o Castellaniella sp019104865 MT123 ABCV34_RS08415 RluA family pseudouridine synthase insig. 48 98
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2616.1 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) sig. 50 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS02725 RluA family pseudouridine synthase sig. 51 90
o Agrobacterium fabrum C58 Atu1471 ribosomal large subunit pseudouridine synthase C no data 36 97
o Rhizobium sp. OAE497 ABIE40_RS09915 RluA family pseudouridine synthase sig. 34 97
o Sinorhizobium meliloti 1021 SMc01275 ribosomal large subunit pseudouridine synthase C protein strong 33 97
o Phaeobacter inhibens DSM 17395 PGA1_c01950 ribosomal large subunit pseudouridine synthase C no data 33 96
o Magnetospirillum magneticum AMB-1 AMB_RS15620 RluA family pseudouridine synthase cofit 35 96
  Rhodopseudomonas palustris CGA009 TX73_016595 RluA family pseudouridine synthase insig. 37 96
o Rhodospirillum rubrum S1H Rru_A2659 Pseudouridine synthase, RluD (NCBI) no data 35 96
  Bosea sp. OAE506 ABIE41_RS14710 RluA family pseudouridine synthase insig. 36 97
o Azospirillum sp. SherDot2 MPMX19_01718 Ribosomal large subunit pseudouridine synthase C insig. 35 92
o Caulobacter crescentus NA1000 CCNA_02059 ribosomal large subunit pseudouridine synthase C strong 35 96
o Caulobacter crescentus NA1000 Δfur CCNA_02059 ribosomal large subunit pseudouridine synthase C cofit 35 96
o Dinoroseobacter shibae DFL-12 Dshi_0315 pseudouridine synthase, RluA family (RefSeq) insig. 33 93
  Synechococcus elongatus PCC 7942 Synpcc7942_1112 ribosomal large subunit pseudouridine synthase D strong 33 95
  Lysobacter sp. OAE881 ABIE51_RS04885 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 34 95
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07865 RluA family pseudouridine synthase cofit 34 93
  Rhizobium sp. OAE497 ABIE40_RS14790 RluA family pseudouridine synthase sig. 33 97
o Azospirillum brasilense Sp245 AZOBR_RS06905 pseudouridine synthase strong 33 95
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14415 pseudouridine synthase strong 33 94
  Phocaeicola dorei CL03T12C01 ABI39_RS02845 RluA family pseudouridine synthase strong 32 97
  Ralstonia solanacearum PSI07 RPSI07_RS15970 RluA family pseudouridine synthase insig. 34 96
  Ralstonia sp. UNC404CL21Col ABZR87_RS13315 RluA family pseudouridine synthase strong 33 96
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08615 RluA family pseudouridine synthase strong 31 97
  Bacteroides stercoris CC31F HMPREF1181_RS03250 RluA family pseudouridine synthase strong 33 92
  Dechlorosoma suillum PS Dsui_2530 pseudouridine synthase, RluA family sig. 34 96
  Bacteroides thetaiotaomicron VPI-5482 BT3712 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) strong 32 96
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01520 RluA family pseudouridine synthase insig. 33 93
  Ralstonia solanacearum UW163 UW163_RS14830 RluA family pseudouridine synthase insig. 33 93
  Fusobacterium nucleatum SB010 HUW76_04985 RluA family pseudouridine synthase cofit 34 77
  Ralstonia solanacearum GMI1000 RS_RS08205 RluA family pseudouridine synthase sig. 33 93
  Rhodospirillum rubrum S1H Rru_A1111 Pseudouridine synthase, RluD (NCBI) strong 32 94