Homologs of GFF572 from Variovorax sp. SCN45

Transcription termination protein NusB
SEED: Transcription termination protein NusB
KEGG: N utilization substance protein B

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF572 Transcription termination protein NusB no data 100 100
o Variovorax sp. OAS795 ABID97_RS17955 transcription antitermination factor NusB no data 89 99
o Acidovorax sp. GW101-3H11 Ac3H11_3134 Transcription termination protein NusB no data 81 83
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5170 Transcription termination protein NusB no data 74 83
o Ralstonia sp. UNC404CL21Col ABZR87_RS08865 transcription antitermination factor NusB no data 51 81
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS12805 transcription antitermination factor NusB no data 47 96
o Ralstonia solanacearum UW163 UW163_RS00760 transcription antitermination factor NusB no data 47 96
o Ralstonia solanacearum PSI07 RPSI07_RS20415 transcription antitermination factor NusB no data 48 96
o Ralstonia solanacearum GMI1000 RS_RS03580 N utilization substance protein B no data 47 96
o Herbaspirillum seropedicae SmR1 HSERO_RS17890 transcription antitermination protein NusB no data 52 80
o Cupriavidus basilensis FW507-4G11 RR42_RS15575 N utilization substance protein B no data 47 90
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04023 NusB antitermination factor no data 52 78
  Paraburkholderia graminis OAS925 ABIE53_003248 N utilization substance protein B no data 52 76
  Dechlorosoma suillum PS Dsui_0713 transcription antitermination factor NusB no data 50 78
  Burkholderia phytofirmans PsJN BPHYT_RS15400 N utilization substance protein B homolog no data 51 76
  Paraburkholderia sabiae LMG 24235 QEN71_RS03280 transcription antitermination factor NusB no data 49 75
  Castellaniella sp019104865 MT123 ABCV34_RS10125 transcription antitermination factor NusB no data 48 77
  Methylophilus sp. DMC18 GFF2573 Transcription antitermination protein NusB no data 44 76
o Pseudomonas sp. SVBP6 COO64_RS15870 nusB transcription antitermination factor NusB no data 40 95
o Pseudomonas sp. RS175 PFR28_03945 Transcription antitermination protein NusB no data 40 95
o Pseudomonas sp. DMC3 GFF3831 Transcription antitermination protein NusB no data 41 94
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1317 Transcription termination protein NusB no data 40 94
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4923 Transcription termination protein NusB no data 40 94
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2653 Transcription termination protein NusB no data 41 94
o Pseudomonas fluorescens FW300-N2C3 AO356_14950 antitermination protein NusB no data 40 94
o Pseudomonas fluorescens FW300-N2E3 AO353_06695 antitermination protein NusB no data 40 94
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05154 Transcription antitermination protein NusB no data 40 95
o Pseudomonas sp. BP01 JOY50_RS20105 nusB transcription antitermination factor NusB no data 38 96
  Pseudomonas segetis P6 ACVTMO_RS04925 nusB transcription antitermination factor NusB no data 46 75
  Marinobacter adhaerens HP15 HP15_495 transcription antitermination protein NusB no data 44 74
  Pseudomonas syringae pv. syringae B728a Psyr_4458 Antitermination protein NusB no data 43 78
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4458 Antitermination protein NusB no data 43 78
o Pseudomonas orientalis W4I3 QF045_RS27210 transcription antitermination factor NusB no data 40 95
  Pseudomonas aeruginosa MRSN321 DY961_RS27725 nusB;go_process=regulation transcription antitermination factor NusB no data 43 72
  Pseudomonas aeruginosa PA14 IKLFDK_20890 transcription antitermination factor NusB no data 43 72
  Pseudomonas aeruginosa PUPa3 DQ20_RS47920 nusB;go_process=regulation transcription antitermination factor NusB no data 43 72
o Pseudomonas putida KT2440 PP_0518 transcription antitermination protein no data 38 96
o Pseudomonas fluorescens SBW25 PFLU_RS26880 transcription antitermination factor NusB no data 39 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26880 transcription antitermination factor NusB no data 39 95
o Pseudomonas simiae WCS417 PS417_25245 antitermination protein NusB no data 39 95
  Pseudomonas stutzeri RCH2 Psest_3548 transcription antitermination factor NusB no data 44 76
  Shewanella amazonensis SB2B Sama_1020 nusB transcription antitermination protein NusB (RefSeq) no data 41 69
  Acinetobacter radioresistens SK82 MPMX26_02972 Transcription antitermination protein NusB no data 42 72
  Shewanella loihica PV-4 Shew_1191 nusB transcription antitermination protein NusB (RefSeq) no data 42 70
  Acinetobacter baumannii LAC-4 RR41_RS00440 transcription antitermination factor NusB no data 43 69
  Kangiella aquimarina DSM 16071 B158DRAFT_1915 NusB antitermination factor no data 39 69
  Pseudomonas sp. S08-1 OH686_15715 transcription antitermination factor NusB no data 42 78
  Escherichia coli BL21 ECD_00364 transcription antitermination protein no data 41 68
  Escherichia fergusonii Becca EFB2_03641 Transcription antitermination protein NusB no data 41 68
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03260 Transcription antitermination protein NusB no data 41 68
  Escherichia coli Nissle 1917 ECOLIN_RS02515 transcription antitermination factor NusB strong 41 68
  Escherichia coli BW25113 b0416 nusB transcription antitermination protein NusB (NCBI) no data 41 68
  Escherichia coli ECOR27 NOLOHH_01390 nusB transcription antitermination factor NusB no data 41 68
  Escherichia coli ECOR38 HEPCGN_07070 nusB transcription antitermination factor NusB no data 41 68
  Escherichia coli ECRC100 OKFHMN_08445 nusB transcription antitermination factor NusB no data 41 68
  Escherichia coli ECRC101 MCAODC_27670 nusB transcription antitermination factor NusB no data 41 68
  Escherichia coli ECRC102 NIAGMN_06500 nusB transcription antitermination factor NusB no data 41 68
  Escherichia coli ECRC62 BNILDI_22805 nusB transcription antitermination factor NusB no data 41 68
  Escherichia coli ECRC98 JDDGAC_12100 nusB transcription antitermination factor NusB no data 41 68
  Escherichia coli ECRC99 KEDOAH_19520 nusB transcription antitermination factor NusB no data 41 68
  Pectobacterium carotovorum WPP14 HER17_RS15950 transcription antitermination factor NusB no data 40 68
  Enterobacter asburiae PDN3 EX28DRAFT_2554 NusB antitermination factor no data 40 68
  Enterobacter sp. TBS_079 MPMX20_01008 Transcription antitermination protein NusB no data 40 68
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4320 Transcription termination protein NusB no data 40 68
  Klebsiella pneumoniae MKP103 KDGMDA_14450 transcription antitermination factor NusB no data 40 68
  Klebsiella michiganensis M5al BWI76_RS06360 N utilization substance protein B no data 40 68
  Alteromonas macleodii MIT1002 MIT1002_02696 N utilization substance protein B no data 39 71
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_26010 nusB transcription antitermination factor NusB no data 40 68
  Erwinia tracheiphila SCR3 LU632_RS18605 nusB transcription antitermination factor NusB no data 40 68
  Pantoea sp. MT58 IAI47_14760 transcription antitermination factor NusB no data 40 68
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS10435 transcription antitermination factor NusB no data 40 68
  Dickeya dadantii 3937 DDA3937_RS05515 transcription antitermination factor NusB no data 40 68
  Erwinia amylovora T8 OLJFJH_18080 transcription antitermination factor NusB no data 39 68
  Serratia liquefaciens MT49 IAI46_04905 transcription antitermination factor NusB no data 41 68
  Dickeya dianthicola 67-19 HGI48_RS05575 transcription antitermination factor NusB no data 40 68
  Dickeya dianthicola ME23 DZA65_RS05900 transcription antitermination factor NusB insig. 40 68
  Rahnella sp. WP5 EX31_RS22135 transcription antitermination factor NusB no data 38 68
  Shewanella oneidensis MR-1 SO3465 nusB N utilization substance protein B (NCBI ptt file) no data 38 69
  Shewanella sp. ANA-3 Shewana3_1100 nusB transcription antitermination protein NusB (RefSeq) no data 38 69
  Rhodanobacter sp. FW510-T8 OKGIIK_11405 nusB transcription antitermination factor NusB no data 47 52
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS10660 transcription antitermination factor NusB no data 45 52
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS05430 transcription antitermination factor NusB no data 47 52
  Rhodanobacter denitrificans MT42 LRK55_RS04350 transcription antitermination factor NusB no data 45 55
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04575 transcription antitermination factor NusB no data 45 55
  Lysobacter sp. OAE881 ABIE51_RS04655 transcription antitermination factor NusB no data 40 70
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4387.1 Transcription termination protein NusB no data 44 52
  Vibrio cholerae E7946 ATCC 55056 CSW01_11540 N utilization substance protein B no data 32 70
  Rhodopseudomonas palustris CGA009 TX73_014140 transcription antitermination factor NusB insig. 33 78
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS06010 transcription antitermination factor NusB no data 33 73
  Rhizobium sp. OAE497 ABIE40_RS06755 transcription antitermination factor NusB no data 30 76
o Agrobacterium fabrum C58 Atu1172 Putative transcription antitermination protein NusB no data 29 84
  Sinorhizobium meliloti 1021 SMc01778 transcription antitermination protein NusB no data 32 71
  Xanthobacter sp. DMC5 GFF580 Transcription antitermination protein NusB no data 31 72
  Synechocystis sp000284455 PCC 6803 SGL_RS11835 transcription antitermination factor NusB strong 33 37
  Desulfovibrio vulgaris Miyazaki F DvMF_3091 NusB antitermination factor (RefSeq) no data 30 44
  Caulobacter crescentus NA1000 CCNA_01422 N utilization substance protein B NusB no data 31 70
  Caulobacter crescentus NA1000 Δfur CCNA_01422 N utilization substance protein B NusB no data 31 70
  Mycobacterium tuberculosis H37Rv Rv2533c N utilization substance protein NusB (NusB protein) no data 33 54
  Desulfovibrio vulgaris Hildenborough JW710 DVU1197 nusB N utilization substance protein B (TIGR) no data 34 34
  Fusobacterium nucleatum SB010 HUW76_01535 transcription antitermination factor NusB strong 32 35