Homologs of GFF5340 from Sphingobium sp. HT1-2

Phage integrase
SEED: Phage integrase family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF5340 Phage integrase cofit 100 100
o Magnetospirillum magneticum AMB-1 AMB_RS18475 integrase insig. 76 100
  Sphingobium sp. HT1-2 GFF5357 Phage integrase insig. 74 100
  Bosea sp. OAE506 ABIE41_RS06940 tyrosine-type recombinase/integrase insig. 58 95
  Dinoroseobacter shibae DFL-12 Dshi_2590 integrase family protein (RefSeq) insig. 59 94
o Caulobacter crescentus NA1000 CCNA_01844 DNA integration/recombination/inversion protein sig. 53 99
o Caulobacter crescentus NA1000 Δfur CCNA_01844 DNA integration/recombination/inversion protein cofit 53 99
  Phaeobacter inhibens DSM 17395 PGA1_c19380 putative phage integrase insig. 56 93
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03410 tyrosine-type recombinase/integrase insig. 57 94
  Pseudomonas stutzeri RCH2 Psest_3423 Site-specific recombinase XerC insig. 57 93
  Pseudomonas sp. BP01 JOY50_RS12925 tyrosine-type recombinase/integrase insig. 55 96
  Lysobacter sp. OAE881 ABIE51_RS03485 tyrosine-type recombinase/integrase insig. 56 93
  Marinobacter adhaerens HP15 HP15_4164 phage integrase family protein insig. 54 93
  Pseudomonas putida KT2440 PP_3791 Site-specific recombinase, phage integrase family insig. 55 92
  Rhodopseudomonas palustris CGA009 TX73_006840 tyrosine-type recombinase/integrase insig. 54 94
o Alteromonas macleodii MIT1002 MIT1002_02605 site-specific tyrosine recombinase XerC insig. 52 96
  Alteromonas macleodii MIT1002 MIT1002_02610 site-specific tyrosine recombinase XerC insig. 52 96
o Escherichia coli Nissle 1917 ECOLIN_RS01460 site-specific integrase insig. 51 93
  Klebsiella michiganensis M5al BWI76_RS13030 site-specific recombinase, phage integrase family protein insig. 50 93
  Shewanella loihica PV-4 Shew_0251 phage integrase family protein (RefSeq) insig. 42 92
  Sinorhizobium meliloti 1021 SMa1874 hypothetical protein insig. 54 54
  Alteromonas macleodii MIT1002 MIT1002_00614 site-specific tyrosine recombinase XerC no data 51 50
  Alteromonas macleodii MIT1002 MIT1002_02616 site-specific tyrosine recombinase XerC no data 51 50
  Bosea sp. OAE506 ABIE41_RS19005 integrase no data 52 39
  Sphingobium sp. HT1-2 GFF5358 Phage integrase cofit 79 23
  Paraburkholderia graminis OAS925 ABIE53_000988 hypothetical protein sig. 38 51
  Phaeobacter inhibens DSM 17395 PGA1_c14060 tyrosine recombinase XerD strong 28 72
  Alteromonas macleodii MIT1002 MIT1002_00157 Tyrosine recombinase XerC insig. 28 76
  Enterobacter sp. TBS_079 MPMX20_04465 Tyrosine recombinase XerC strong 30 73
  Vibrio cholerae E7946 ATCC 55056 CSW01_00650 tyrosine recombinase XerC strong 33 73
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.847.1 Site-specific tyrosine recombinase no data 32 73
  Klebsiella michiganensis M5al BWI76_RS01210 tyrosine recombinase XerC strong 29 73
  Enterobacter asburiae PDN3 EX28DRAFT_4480 tyrosine recombinase XerC no data 29 73
  Sphingobium sp. HT1-2 GFF2416 Site-specific tyrosine recombinase XerD strong 29 72
  Azospirillum sp. SherDot2 MPMX19_02643 Tyrosine recombinase XerD no data 27 71
  Klebsiella pneumoniae MKP103 KDGMDA_09700 tyrosine recombinase XerC strong 28 73
  Escherichia coli BL21 ECD_03687 site-specific tyrosine recombinase sig. 28 73
  Escherichia fergusonii Becca EFB2_04826 Tyrosine recombinase XerC strong 28 73
  Escherichia coli ECOR27 NOLOHH_06550 xerC tyrosine recombinase XerC insig. 28 73
  Escherichia coli ECOR38 HEPCGN_13125 xerC tyrosine recombinase XerC cofit 28 73
  Escherichia coli ECRC62 BNILDI_04985 xerC tyrosine recombinase XerC insig. 28 73
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04239 Tyrosine recombinase XerC insig. 28 73
  Escherichia coli Nissle 1917 ECOLIN_RS21875 tyrosine recombinase XerC strong 28 73
  Escherichia coli BW25113 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) strong 28 73
  Enterobacter sp. TBS_079 MPMX20_03753 Tyrosine recombinase XerD strong 29 73
  Azospirillum brasilense Sp245 AZOBR_RS03240 recombinase XerD insig. 28 73
  Escherichia coli ECRC100 OKFHMN_14420 xerC tyrosine recombinase XerC insig. 28 73
  Escherichia coli ECRC101 MCAODC_04925 xerC tyrosine recombinase XerC no data 28 73
  Escherichia coli ECRC102 NIAGMN_12175 xerC tyrosine recombinase XerC no data 28 73
  Escherichia coli ECRC98 JDDGAC_18045 xerC tyrosine recombinase XerC no data 28 73
  Escherichia coli ECRC99 KEDOAH_13730 xerC tyrosine recombinase XerC no data 28 73
  Enterobacter asburiae PDN3 EX28DRAFT_2945 tyrosine recombinase XerD insig. 28 73
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF239 Tyrosine recombinase XerC no data 29 73
  Ralstonia solanacearum PSI07 RPSI07_RS23690 tyrosine recombinase XerC insig. 30 73
  Paraburkholderia sabiae LMG 24235 QEN71_RS42750 tyrosine-type recombinase/integrase insig. 28 72
  Acinetobacter radioresistens SK82 MPMX26_02230 Tyrosine recombinase XerC no data 32 76
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3595 Site-specific recombinase XerD sig. 29 67
  Pantoea sp. MT58 IAI47_03820 site-specific tyrosine recombinase XerD strong 26 73
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS15880 site-specific tyrosine recombinase XerD cofit 26 73
  Desulfovibrio vulgaris Miyazaki F DvMF_0767 integrase family protein (RefSeq) insig. 34 51
  Acinetobacter baumannii LAC-4 RR41_RS04465 tyrosine recombinase no data 30 76
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04165 site-specific tyrosine recombinase XerD no data 28 70
  Lysobacter sp. OAE881 ABIE51_RS03035 tyrosine recombinase XerC strong 30 73
  Caulobacter crescentus NA1000 CCNA_02470 DNA integration/recombination/inversion protein cofit 39 32
  Caulobacter crescentus NA1000 Δfur CCNA_02470 DNA integration/recombination/inversion protein cofit 39 32
  Methylophilus sp. DMC18 GFF1535 Tyrosine recombinase XerC insig. 27 73
  Herbaspirillum seropedicae SmR1 HSERO_RS21475 recombinase XerC insig. 28 72
  Serratia liquefaciens MT49 IAI46_00725 tyrosine recombinase XerC insig. 35 43
  Dinoroseobacter shibae DFL-12 Dshi_3700 integrase family protein (RefSeq) insig. 27 72
  Pectobacterium carotovorum WPP14 HER17_RS01350 tyrosine recombinase XerC strong 28 76
  Bacteroides stercoris CC31F HMPREF1181_RS15715 site-specific integrase insig. 28 70
  Kangiella aquimarina DSM 16071 B158DRAFT_0244 tyrosine recombinase XerC subunit strong 26 84
  Pantoea sp. MT58 IAI47_18400 tyrosine recombinase XerC sig. 28 76
  Rahnella sp. WP5 EX31_RS15165 tyrosine recombinase XerC strong 28 76
  Dinoroseobacter shibae DFL-12 Dshi_3629 integrase family protein (RefSeq) no data 27 73
  Dinoroseobacter shibae DFL-12 Dshi_3661 integrase family protein (RefSeq) no data 27 73
  Methylophilus sp. DMC18 GFF2342 Tyrosine recombinase XerD insig. 28 72
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS15380 tyrosine recombinase XerC no data 28 73
  Dinoroseobacter shibae DFL-12 Dshi_3696 integrase family protein (RefSeq) no data 26 78
  Dinoroseobacter shibae DFL-12 Dshi_4006 integrase family protein (RefSeq) no data 26 78
  Rahnella sp. WP5 EX31_RS13480 site-specific tyrosine recombinase XerD strong 25 73
  Phaeobacter inhibens DSM 17395 PGA1_c05760 putative tyrosine recombinase XerC strong 29 70
  Pseudomonas segetis P6 MPMX49_04536 Tyrosine recombinase XerC no data 29 76
  Dickeya dadantii 3937 DDA3937_RS19890 tyrosine recombinase XerC no data 27 73
  Magnetospirillum magneticum AMB-1 AMB_RS19880 site-specific tyrosine recombinase XerD cofit 28 69
  Dinoroseobacter shibae DFL-12 Dshi_5002 xerC hypothetical protein (NCBI) no data 26 70
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_08780 xerC tyrosine recombinase XerC no data 26 73
  Erwinia tracheiphila SCR3 LU632_RS24135 xerC tyrosine recombinase XerC no data 26 73
  Shewanella loihica PV-4 Shew_1254 phage integrase family protein (RefSeq) insig. 26 81
  Paraburkholderia sabiae LMG 24235 QEN71_RS39870 tyrosine-type recombinase/integrase insig. 28 73
  Shewanella amazonensis SB2B Sama_3247 integrase/recombinase XerC (RefSeq) strong 27 78
  Dickeya dianthicola ME23 DZA65_RS21090 tyrosine recombinase XerC insig. 27 73
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10220 site-specific tyrosine recombinase XerD insig. 25 73
  Mycobacterium tuberculosis H37Rv Rv2646 Probable integrase insig. 35 37
  Dechlorosoma suillum PS Dsui_0651 tyrosine recombinase XerC insig. 30 73
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5461 Tyrosine recombinase XerD insig. 28 73
  Erwinia amylovora T8 OLJFJH_06415 tyrosine recombinase XerC strong 26 73
  Pseudomonas aeruginosa PA14 IKLFDK_27050 tyrosine recombinase XerC cofit 29 73
  Alteromonas macleodii MIT1002 MIT1002_03221 Tyrosine recombinase XerC insig. 24 80
  Caulobacter crescentus NA1000 CCNA_00349 integrase/recombinase, XerC-CodV family strong 29 72