Homologs of GFF4778 from Sphingobium sp. HT1-2

Uncharacterized UPF0118 membrane protein
SEED: FIG00636993: hypothetical protein

172 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF4778 Uncharacterized UPF0118 membrane protein cofit 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2014 Predicted permease sig. 53 95
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10480 AI-2E family transporter insig. 31 75
  Rhodopseudomonas palustris CGA009 TX73_014355 AI-2E family transporter insig. 28 83
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10475 AI-2E family transporter insig. 28 87
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.104.1 Permease insig. 30 81
  Azospirillum sp. SherDot2 MPMX19_00796 hypothetical protein insig. 32 79
  Azospirillum brasilense Sp245 AZOBR_RS10790 membrane protein insig. 28 87
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08135 AI-2E family transporter insig. 31 90
  Azospirillum brasilense Sp245 AZOBR_RS17890 hypothetical protein insig. 29 68
  Pseudomonas stutzeri RCH2 Psest_3876 Predicted permease insig. 30 59
  Xanthobacter sp. DMC5 GFF585 hypothetical protein insig. 28 75
  Shewanella oneidensis MR-1 SO2867 permease PerM, putative (NCBI ptt file) insig. 30 40
  Synechococcus elongatus PCC 7942 Synpcc7942_0518 hypothetical protein strong 28 46
  Shewanella sp. ANA-3 Shewana3_1651 hypothetical protein (RefSeq) insig. 29 40
  Rahnella sp. WP5 EX31_RS24360 AI-2E family transporter insig. 26 75
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2176 Putative permease PerM (= YfgO) insig. 27 58
  Escherichia coli Nissle 1917 ECOLIN_RS14160 AI-2E family transporter insig. 28 58
  Kangiella aquimarina DSM 16071 B158DRAFT_2441 Predicted permease insig. 25 59
  Synechocystis sp000284455 PCC 6803 SGL_RS13185 AI-2E family transporter strong 24 60
  Escherichia coli BL21 ECD_02385 putative UPF0118 family inner membrane permease sig. 27 58
  Escherichia coli ECOR27 NOLOHH_13490 perM Putative permease PerM insig. 27 58
  Escherichia coli ECOR38 HEPCGN_21005 perM Putative permease PerM insig. 27 58
  Escherichia coli ECRC100 OKFHMN_21840 perM Putative permease PerM cofit 27 58
  Escherichia coli ECRC101 MCAODC_12370 perM Putative permease PerM insig. 27 58
  Escherichia coli ECRC102 NIAGMN_19610 perM Putative permease PerM insig. 27 58
  Escherichia coli ECRC62 BNILDI_12300 perM Putative permease PerM cofit 27 58
  Escherichia coli ECRC98 JDDGAC_25785 perM Putative permease PerM insig. 27 58
  Escherichia coli ECRC99 KEDOAH_06380 perM Putative permease PerM no data 27 58
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01233 Putative transport protein YhhT insig. 27 58
  Escherichia coli BW25113 b2493 yfgO predicted inner membrane protein (NCBI) strong 27 58
  Escherichia fergusonii Becca EFB2_01405 Putative transport protein YhhT insig. 27 58
  Enterobacter asburiae PDN3 EX28DRAFT_0179 Predicted permease insig. 32 38
  Enterobacter sp. TBS_079 MPMX20_03343 Putative transport protein YhhT insig. 32 38
  Pseudomonas segetis P6 ACVTMO_RS08430 AI-2E family transporter insig. 25 64
  Klebsiella michiganensis M5al BWI76_RS20920 AI-2E family transporter insig. 33 34
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19880 AI-2E family transporter cofit 28 62
  Shewanella amazonensis SB2B Sama_1911 hypothetical protein (RefSeq) insig. 23 72
  Rahnella sp. WP5 EX31_RS22725 AI-2E family transporter insig. 30 34
  Azospirillum brasilense Sp245 AZOBR_RS12575 membrane protein insig. 28 58
  Enterobacter asburiae PDN3 EX28DRAFT_1511 Predicted permease insig. 27 84
  Azospirillum sp. SherDot2 MPMX19_00442 Putative transport protein YhhT insig. 28 58
  Shewanella loihica PV-4 Shew_1843 hypothetical protein (RefSeq) no data 27 50
  Klebsiella michiganensis M5al BWI76_RS16015 pheromone autoinducer 2 transporter sig. 26 72
  Klebsiella pneumoniae MKP103 KDGMDA_27760 AI-2E family transporter insig. 31 37
  Klebsiella pneumoniae MRSN742743 KFA93_RS05370 AI-2E family transporter insig. 31 37
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1794 Putative transport protein insig. 26 77
  Lysobacter sp. OAE881 ABIE51_RS03245 AI-2E family transporter insig. 32 37
  Erwinia amylovora T8 OLJFJH_04455 pheromone autoinducer 2 transporter insig. 30 51
  Fusobacterium nucleatum SB010 HUW76_03025 AI-2E family transporter strong 24 68
  Klebsiella pneumoniae MKP103 KDGMDA_21180 pheromone autoinducer 2 transporter insig. 25 76
  Klebsiella pneumoniae MRSN742743 KFA93_RS16315 AI-2E family transporter insig. 25 76
  Paraburkholderia sabiae LMG 24235 QEN71_RS26450 AI-2E family transporter cofit 23 94
  Pseudomonas stutzeri RCH2 Psest_1512 Predicted permease strong 27 45
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS15645 AI-2E family transporter insig. 29 60
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS05285 AI-2E family transporter insig. 25 94
  Ralstonia solanacearum UW163 UW163_RS08340 AI-2E family transporter insig. 25 94
  Rhodanobacter denitrificans MT42 LRK55_RS12655 AI-2E family transporter cofit 29 60
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12955 AI-2E family transporter insig. 29 60
  Xanthobacter sp. DMC5 GFF3561 hypothetical protein insig. 35 30
  Rhodopseudomonas palustris CGA009 TX73_019910 AI-2E family transporter insig. 33 38
  Alteromonas macleodii MIT1002 MIT1002_01419 Transport of quorum-sensing signal protein cofit 31 38
  Dechlorosoma suillum PS Dsui_2429 putative permease cofit 34 30
  Herbaspirillum seropedicae SmR1 HSERO_RS02655 transporter insig. 31 34
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4952.1 transport protein insig. 28 48
  Shewanella amazonensis SB2B Sama_1490 hypothetical protein (RefSeq) insig. 25 73
  Enterobacter sp. TBS_079 MPMX20_02053 AI-2 transport protein TqsA insig. 26 75
  Phaeobacter inhibens DSM 17395 PGA1_c21430 putative permease sig. 27 58
  Bosea sp. OAE506 ABIE41_RS06635 AI-2E family transporter insig. 25 50
  Kangiella aquimarina DSM 16071 B158DRAFT_0731 Predicted permease cofit 22 84
  Paraburkholderia graminis OAS925 ABIE53_000873 putative PurR-regulated permease PerM sig. 24 91
  Rhodanobacter sp. FW510-T8 OKGIIK_02325 AI-2E family transporter sig. 29 58
  Pseudomonas aeruginosa MRSN321 DY961_RS07445 AI-2E family transporter insig. 30 26
  Pseudomonas aeruginosa PA14 IKLFDK_04570 AI-2E family transporter insig. 30 26
  Pseudomonas aeruginosa PUPa3 DQ20_RS45345 AI-2E family transporter insig. 30 26
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS17355 AI-2E family transporter cofit 25 65
  Alteromonas macleodii MIT1002 MIT1002_02210 pheromone autoinducer 2 transporter sig. 25 49
  Serratia liquefaciens MT49 IAI46_18795 AI-2E family transporter insig. 29 38
  Variovorax sp. OAS795 ABID97_RS08205 AI-2E family transporter insig. 26 42
  Phocaeicola dorei CL03T12C01 ABI39_RS09270 AI-2E family transporter insig. 22 73
  Dinoroseobacter shibae DFL-12 Dshi_3908 protein of unknown function UPF0118 (RefSeq) cofit 27 41
  Shewanella sp. ANA-3 Shewana3_1544 hypothetical protein (RefSeq) insig. 25 72
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13720 AI-2E family transporter sig. 24 74
  Sphingobium sp. HT1-2 GFF4280 Uncharacterized UPF0118 membrane protein cofit 29 39
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04709 Predicted PurR-regulated permease PerM insig. 24 91
  Herbaspirillum seropedicae SmR1 HSERO_RS03160 ABC transporter permease insig. 26 63
  Shewanella oneidensis MR-1 SO2920 conserved hypothetical protein (NCBI ptt file) insig. 30 42
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04800 AI-2E family transporter insig. 23 63
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02210 AI-2E family transporter sig. 23 77
  Marinobacter adhaerens HP15 HP15_2029 permease perM strong 22 66
  Pseudomonas sp. RS175 PFR28_00696 hypothetical protein insig. 34 20
  Pseudomonas syringae pv. syringae B728a Psyr_3687 Protein of unknown function UPF0118 insig. 26 54
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3687 Protein of unknown function UPF0118 insig. 26 54
  Enterobacter sp. TBS_079 MPMX20_04354 Putative transport protein YhhT insig. 29 33
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11985 AI-2E family transporter insig. 26 75
  Pseudomonas putida KT2440 PP_1234 putative permease sig. 35 19
  Klebsiella michiganensis M5al BWI76_RS26450 hypothetical protein insig. 30 33
  Azospirillum sp. SherDot2 MPMX19_01301 AI-2 transport protein TqsA insig. 28 57
  Bacteroides thetaiotaomicron VPI-5482 BT2276 putative permease (NCBI ptt file) insig. 22 73
  Mycobacterium tuberculosis H37Rv Rv0205 Probable conserved transmembrane protein insig. 37 29
  Vibrio cholerae E7946 ATCC 55056 CSW01_10775 AI-2E family transporter insig. 25 41
  Dinoroseobacter shibae DFL-12 Dshi_0742 protein of unknown function UPF0118 (RefSeq) no data 24 58
  Pseudomonas fluorescens SBW25 PFLU_RS07260 AI-2E family transporter insig. 32 20
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07260 AI-2E family transporter insig. 32 20
  Pseudomonas simiae WCS417 PS417_07150 permase sig. 32 20
  Pseudomonas fluorescens FW300-N2C3 AO356_04545 permease sig. 32 20
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01578 hypothetical protein cofit 31 21
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4510 Putative permease PerM (= YfgO) cofit 31 21
  Rhodospirillum rubrum S1H Rru_A3520 Protein of unknown function UPF0118 (NCBI) cofit 30 50
  Pseudomonas syringae pv. syringae B728a Psyr_1545 Protein of unknown function UPF0118 insig. 28 49
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1545 Protein of unknown function UPF0118 cofit 28 49
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS01450 AI-2E family transporter cofit 25 54
  Bacteroides ovatus ATCC 8483 BACOVA_03070 hypothetical protein insig. 22 73
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2750 Putative permease PerM (= YfgO) sig. 32 20
  Pseudomonas sp. DMC3 GFF2283 hypothetical protein cofit 31 21
  Pseudomonas fluorescens FW300-N2E3 AO353_17655 permease insig. 31 21
  Escherichia coli BL21 ECD_03323 UPF0118 family putative transporter insig. 29 33
  Escherichia coli ECRC100 OKFHMN_16650 yhhT Putative transport protein YhhT insig. 29 33
  Escherichia coli ECRC101 MCAODC_07180 yhhT Putative transport protein YhhT insig. 29 33
  Escherichia coli ECRC102 NIAGMN_14420 yhhT Putative transport protein YhhT cofit 29 33
  Escherichia coli ECRC98 JDDGAC_20280 yhhT Putative transport protein YhhT insig. 29 33
  Escherichia coli ECRC99 KEDOAH_11490 yhhT Putative transport protein YhhT no data 29 33
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00229 Putative transport protein YhhT insig. 29 33
  Escherichia coli BW25113 b3474 yhhT orf, hypothetical protein (VIMSS) insig. 29 33
  Alteromonas macleodii MIT1002 MIT1002_03251 Transport of quorum-sensing signal protein insig. 31 36
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3329 Putative permease PerM (= YfgO) sig. 31 21
  Escherichia coli ECOR27 NOLOHH_08455 yhhT Putative transport protein YhhT insig. 29 33
  Escherichia coli ECOR38 HEPCGN_15480 yhhT Putative transport protein YhhT insig. 29 33
  Escherichia coli ECRC62 BNILDI_03060 yhhT Putative transport protein YhhT insig. 29 33
  Burkholderia phytofirmans PsJN BPHYT_RS03635 ABC transporter permease insig. 24 91
  Pseudomonas sp. BP01 JOY50_RS01725 AI-2E family transporter insig. 35 18
  Pseudomonas sp. RS175 PFR28_03215 Sodium-lithium/proton antiporter insig. 23 66
  Burkholderia phytofirmans PsJN BPHYT_RS28000 permease insig. 31 36
  Pseudomonas segetis P6 ACVTMO_RS08240 AI-2E family transporter insig. 25 61
  Burkholderia phytofirmans PsJN BPHYT_RS26275 membrane protein insig. 31 37
  Escherichia fergusonii Becca EFB2_00342 Putative transport protein YhhT insig. 28 33
  Escherichia coli Nissle 1917 ECOLIN_RS19860 AI-2E family transporter insig. 28 33
  Pantoea sp. MT58 IAI47_01450 AI-2E family transporter insig. 24 58
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2526 Predicted permease sig. 21 67
  Pseudomonas protegens RBAN4 FABNJH_07585 Permease insig. 31 21
  Pseudomonas sp. SVBP6 COO64_RS20230 AI-2E family transporter insig. 34 18
  Enterobacter asburiae PDN3 EX28DRAFT_4108 Predicted permease insig. 28 33
  Escherichia coli BL21 ECD_01570 pheromone AI-2 transporter no data 28 38
  Escherichia fergusonii Becca EFB2_02391 AI-2 transport protein TqsA insig. 28 38
  Escherichia coli ECOR27 NOLOHH_18205 tqsA AI-2 transporter TqsA no data 28 38
  Escherichia coli ECOR38 HEPCGN_06075 tqsA AI-2 transporter TqsA insig. 28 38
  Escherichia coli ECRC100 OKFHMN_27700 tqsA AI-2 transporter TqsA insig. 28 38
  Escherichia coli ECRC101 MCAODC_17710 tqsA AI-2 transporter TqsA insig. 28 38
  Escherichia coli ECRC102 NIAGMN_00375 tqsA AI-2 transporter TqsA insig. 28 38
  Escherichia coli ECRC62 BNILDI_16995 tqsA AI-2 transporter TqsA cofit 28 38
  Escherichia coli ECRC99 KEDOAH_00405 tqsA AI-2 transporter TqsA no data 28 38
  Escherichia coli Nissle 1917 ECOLIN_RS08945 AI-2 transporter TqsA no data 28 38
  Escherichia coli BW25113 b1601 ydgG predicted inner membrane protein (NCBI) strong 28 38
  Escherichia coli ECRC98 JDDGAC_02290 tqsA AI-2 transporter TqsA insig. 28 38
  Pseudomonas sp. BP01 JOY50_RS23950 AI-2E family transporter insig. 25 66
  Paraburkholderia graminis OAS925 ABIE53_005980 putative PurR-regulated permease PerM insig. 30 37
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07425 AI-2E family transporter strong 24 67
  Ralstonia solanacearum PSI07 RPSI07_RS12015 AI-2E family transporter cofit 24 94
  Bacteroides stercoris CC31F HMPREF1181_RS09580 AI-2E family transporter insig. 22 58
  Pseudomonas simiae WCS417 PS417_20110 membrane protein insig. 27 54
  Pseudomonas putida KT2440 PP_1667 putative Transporter insig. 26 61
  Shewanella loihica PV-4 Shew_2398 hypothetical protein (RefSeq) insig. 25 81
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02810 Predicted PurR-regulated permease PerM insig. 30 37
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF530 Putative PerM family permease insig. 28 33
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02125 AI-2 transport protein TqsA insig. 28 38
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4250 Putative permease often clustered with de novo purine synthesis insig. 25 62
  Pseudomonas orientalis W4I3 QF045_RS22205 AI-2E family transporter cofit 27 54
  Pseudomonas fluorescens SBW25 PFLU_RS22055 AI-2E family transporter insig. 26 54
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22055 AI-2E family transporter sig. 26 54
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04215 Sodium-lithium/proton antiporter cofit 26 61
  Rhodanobacter sp. FW510-T8 OKGIIK_14975 AI-2E family transporter insig. 28 31
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14340 AI-2E family transporter insig. 20 78