Homologs of GFF4429 from Variovorax sp. SCN45

Inner membrane protein YpjD
SEED: CcsA-related protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF4429 Inner membrane protein YpjD insig. 100 100
o Variovorax sp. OAS795 ABID97_RS06430 cytochrome c biogenesis protein CcsA sig. 87 99
o Acidovorax sp. GW101-3H11 Ac3H11_4016 CcsA-related protein sig. 70 99
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF598 CcsA-related protein cofit 63 79
  Herbaspirillum seropedicae SmR1 HSERO_RS01870 ABC transporter permease strong 42 87
  Cupriavidus basilensis FW507-4G11 RR42_RS17885 ABC transporter permease strong 42 82
  Dechlorosoma suillum PS Dsui_1321 ABC-type uncharacterized transport system, permease component strong 40 86
  Paraburkholderia graminis OAS925 ABIE53_003581 ABC-type uncharacterized transport system permease subunit strong 42 92
  Burkholderia phytofirmans PsJN BPHYT_RS17075 ABC transporter permease strong 44 77
  Ralstonia solanacearum GMI1000 RS_RS14050 inner membrane protein YpjD strong 43 83
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS06100 ABC transporter permease insig. 41 83
  Ralstonia solanacearum UW163 UW163_RS07525 ABC transporter permease insig. 41 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06271 ABC-type uncharacterized transport system, permease component strong 43 77
  Methylophilus sp. DMC18 GFF1749 Cytochrome c biogenesis protein CcsA cofit 36 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS27235 cytochrome c biogenesis protein CcsA cofit 41 92
  Castellaniella sp019104865 MT123 ABCV34_RS09015 cytochrome c biogenesis protein CcsA no data 37 86
  Ralstonia sp. UNC404CL21Col ABZR87_RS01765 cytochrome c biogenesis protein CcsA strong 42 83
  Pseudomonas sp. DMC3 GFF1980 Inner membrane protein YpjD insig. 41 62
  Pseudomonas fluorescens FW300-N2E3 AO353_04395 cytochrome C assembly protein no data 40 62
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04735 Inner membrane protein YpjD cofit 40 56
  Pseudomonas sp. RS175 PFR28_00325 Inner membrane protein YpjD strong 40 58
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1714 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) insig. 40 58
  Marinobacter adhaerens HP15 HP15_756 cytochrome c assembly protein strong 32 94
  Pseudomonas orientalis W4I3 QF045_RS25120 cytochrome c biogenesis protein CcsA cofit 40 62
  Pseudomonas putida KT2440 PP_1460 putative Membrane protein strong 34 97
  Pseudomonas fluorescens SBW25 PFLU_RS24590 cytochrome c assembly protein cofit 41 62
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24590 cytochrome c assembly protein strong 41 62
  Pseudomonas simiae WCS417 PS417_22930 cytochrome C assembly protein no data 40 56
  Pseudomonas sp. SVBP6 COO64_RS04870 inner membrane protein YpjD insig. 41 62
  Pseudomonas sp. BP01 JOY50_RS11665 inner membrane protein YpjD insig. 35 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_875 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) sig. 41 62
  Pseudomonas stutzeri RCH2 Psest_3135 ABC-type uncharacterized transport system, permease component no data 40 56
  Pseudomonas segetis P6 ACVTMO_RS07755 cytochrome C assembly family protein strong 35 76
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3151 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) strong 40 58
  Pseudomonas sp. S08-1 OH686_17715 Inner membrane protein YpjD strong 37 77
  Pseudomonas fluorescens FW300-N2C3 AO356_06415 cytochrome C assembly protein strong 40 58
  Acinetobacter baumannii LAC-4 RR41_RS15305 cytochrome c biogenesis protein CcsA sig. 28 87
  Rhodanobacter sp. FW510-T8 OKGIIK_09575 ypjD Cytochrome C assembly protein strong 41 54
  Acinetobacter radioresistens SK82 MPMX26_02469 Inner membrane protein YpjD strong 31 54
  Alteromonas macleodii MIT1002 MIT1002_01295 Inner membrane protein YpjD strong 27 83
  Lysobacter sp. OAE881 ABIE51_RS07730 cytochrome c biogenesis protein CcsA insig. 54 38
  Pseudomonas syringae pv. syringae B728a Psyr_1280 Cytochrome c assembly protein sig. 35 75
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1280 Cytochrome c assembly protein insig. 35 75
  Pseudomonas aeruginosa MRSN321 DY961_RS14235 inner membrane protein YpjD sig. 39 60
  Pseudomonas aeruginosa PA14 IKLFDK_19130 inner membrane protein YpjD sig. 39 60
  Pseudomonas aeruginosa PUPa3 DQ20_RS42890 inner membrane protein YpjD strong 39 60
  Klebsiella pneumoniae MKP103 KDGMDA_02230 Cytochrome C assembly protein insig. 31 56
  Klebsiella pneumoniae MRSN742743 KFA93_RS24665 inner membrane protein YpjD sig. 31 56
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS07425 cytochrome c biogenesis protein CcsA insig. 38 76
  Vibrio cholerae E7946 ATCC 55056 CSW01_02985 inner membrane protein YpjD insig. 29 98
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3775.1 FIG001154: CcsA-related protein insig. 41 54
  Shewanella sp. ANA-3 Shewana3_3019 cytochrome c assembly protein (RefSeq) strong 26 82
  Shewanella amazonensis SB2B Sama_0887 hypothetical protein (RefSeq) sig. 28 82
  Serratia liquefaciens MT49 IAI46_03910 inner membrane protein YpjD cofit 35 56
  Shewanella oneidensis MR-1 SO1355 membrane protein, putative (NCBI ptt file) strong 27 82
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08835 cytochrome c biogenesis protein CcsA no data 49 38
  Escherichia coli Nissle 1917 ECOLIN_RS14755 inner membrane protein YpjD insig. 30 70
  Escherichia coli BW25113 b2611 ypjD predicted inner membrane protein (RefSeq) sig. 30 70
  Escherichia coli BL21 ECD_02500 cytochrome c assembly protein family inner membrane protein sig. 32 56
  Escherichia coli ECOR27 NOLOHH_12840 ypjD Inner membrane protein YpjD sig. 32 56
  Escherichia coli ECOR38 HEPCGN_20285 ypjD Inner membrane protein YpjD cofit 32 56
  Escherichia coli ECRC100 OKFHMN_21165 ypjD Inner membrane protein YpjD cofit 32 56
  Escherichia coli ECRC101 MCAODC_11695 ypjD Inner membrane protein YpjD insig. 32 56
  Escherichia coli ECRC102 NIAGMN_18935 ypjD Inner membrane protein YpjD insig. 32 56
  Escherichia coli ECRC62 BNILDI_11645 ypjD Inner membrane protein YpjD cofit 32 56
  Escherichia coli ECRC98 JDDGAC_24830 ypjD Inner membrane protein YpjD insig. 32 56
  Escherichia coli ECRC99 KEDOAH_07055 ypjD Inner membrane protein YpjD no data 32 56
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01095 Inner membrane protein YpjD insig. 32 56
  Enterobacter sp. TBS_079 MPMX20_03481 Inner membrane protein YpjD strong 28 82
  Shewanella loihica PV-4 Shew_1061 cytochrome c assembly protein (RefSeq) no data 27 77
  Enterobacter asburiae PDN3 EX28DRAFT_2714 ABC-type uncharacterized transport system, permease component strong 28 82
  Rhodanobacter denitrificans MT42 LRK55_RS02275 cytochrome c biogenesis protein CcsA insig. 50 38
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4167 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) insig. 32 56
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02520 cytochrome c biogenesis protein CcsA strong 50 38
  Escherichia fergusonii Becca EFB2_01281 Inner membrane protein YpjD insig. 29 83
  Erwinia amylovora T8 OLJFJH_09645 Cytochrome C assembly protein insig. 30 54
  Pantoea sp. MT58 IAI47_04365 inner membrane protein YpjD strong 31 54
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16600 inner membrane protein YpjD cofit 31 54
  Azospirillum brasilense Sp245 AZOBR_RS14415 hypothetical protein sig. 32 54
  Azospirillum sp. SherDot2 MPMX19_01109 hypothetical protein insig. 32 55
  Erwinia tracheiphila SCR3 LU632_RS15675 inner membrane protein YpjD insig. 32 54
  Synechocystis sp000284455 PCC 6803 SGL_RS04050 c-type cytochrome biogenesis protein CcsB no data 31 33
  Synechococcus elongatus PCC 7942 Synpcc7942_0511 ccsA ABC-type transport system involved in cytochrome c biogenesis permease component-like no data 29 46
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_01540 Cytochrome C assembly protein cofit 32 54
  Pectobacterium carotovorum WPP14 HER17_RS05105 inner membrane protein YpjD cofit 33 54
  Rahnella sp. WP5 EX31_RS07735 inner membrane protein YpjD insig. 32 56
  Klebsiella michiganensis M5al BWI76_RS21535 inner membrane protein YpjD strong 26 71
  Mycobacterium tuberculosis H37Rv Rv0529 Possible cytochrome C-type biogenesis protein CcsA no data 28 54
  Dickeya dianthicola 67-19 HGI48_RS16295 inner membrane protein YpjD cofit 28 81
  Dickeya dianthicola ME23 DZA65_RS17390 inner membrane protein YpjD strong 28 81
  Dickeya dadantii 3937 DDA3937_RS16185 inner membrane protein YpjD cofit 27 81
  Kangiella aquimarina DSM 16071 B158DRAFT_2259 ABC-type uncharacterized transport system, permease component sig. 28 53
  Castellaniella sp019104865 MT123 ABCV34_RS12675 c-type cytochrome biogenesis protein CcsB no data 29 47
  Rhodospirillum rubrum S1H Rru_A1675 Cytochrome c assembly protein (NCBI) strong 31 58
  Ralstonia sp. UNC404CL21Col ABZR87_RS02670 c-type cytochrome biogenesis protein CcsB no data 29 45
  Ralstonia solanacearum GMI1000 RS_RS14960 c-type cytochrome biogenesis protein CcsB no data 26 54
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07020 c-type cytochrome biogenesis protein CcsB strong 28 45
  Ralstonia solanacearum PSI07 RPSI07_RS10220 c-type cytochrome biogenesis protein CcsB sig. 28 45
  Ralstonia solanacearum UW163 UW163_RS06595 c-type cytochrome biogenesis protein CcsB insig. 28 45
  Magnetospirillum magneticum AMB-1 AMB_RS11935 hypothetical protein no data 31 54