Homologs of GFF3908 from Xanthobacter sp. DMC5

hypothetical protein
SEED: cold-shock protein
KEGG: cold shock protein (beta-ribbon, CspA family)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF3908 hypothetical protein no data 100 100
o Azospirillum sp. SherDot2 MPMX19_01980 hypothetical protein no data 47 87
o Azospirillum brasilense Sp245 AZOBR_RS20315 cold-shock protein no data 45 87
o Magnetospirillum magneticum AMB-1 AMB_RS19780 cold-shock protein no data 46 83
  Azospirillum brasilense Sp245 AZOBR_RS05440 cold-shock protein insig. 50 78
  Azospirillum sp. SherDot2 MPMX19_05652 hypothetical protein insig. 45 87
  Azospirillum brasilense Sp245 AZOBR_RS02665 cold-shock protein sig. 40 83
  Azospirillum brasilense Sp245 AZOBR_RS31150 putative Cold-shock DNA-binding protein (fragment) no data 42 76
  Rhodospirillum rubrum S1H Rru_A3462 Cold-shock DNA-binding domain protein (NCBI) sig. 37 77
  Dinoroseobacter shibae DFL-12 Dshi_1788 cold-shock DNA-binding domain protein (RefSeq) strong 36 77
  Caulobacter crescentus NA1000 CCNA_01451 cold shock protein cspD sig. 37 74
  Caulobacter crescentus NA1000 Δfur CCNA_01451 cold shock protein cspD cofit 37 74
  Bosea sp. OAE506 ABIE41_RS14945 cold-shock protein no data 35 80
  Agrobacterium fabrum C58 Atu1803 cold shock protein strong 32 82
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3426 Cold shock proteins insig. 32 80
  Xanthobacter sp. DMC5 GFF888 hypothetical protein insig. 35 76
  Rhodopseudomonas palustris CGA009 TX73_013040 cold-shock protein strong 32 91
  Rhizobium sp. OAE497 ABIE40_RS08740 cold-shock protein no data 31 84
  Sinorhizobium meliloti 1021 SMc00289 cold shock transcription regulator protein no data 32 82
  Azospirillum sp. SherDot2 MPMX19_04809 hypothetical protein insig. 34 78
  Phaeobacter inhibens DSM 17395 PGA1_c16790 putative cold shock protein sig. 32 77
  Sphingobium sp. HT1-2 GFF3676 Cold shock protein of CSP family => dimer no data 39 69
  Azospirillum brasilense Sp245 AZOBR_RS30085 DNA-binding protein sig. 33 78
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07090 cold-shock protein no data 59 29
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS11915 cold-shock protein insig. 59 29
  Rhodanobacter sp. FW510-T8 OKGIIK_07815 cspC cold-shock protein no data 59 29
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2537 Cold shock proteins no data 37 70
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05885 cold-shock protein insig. 31 77
  Castellaniella sp019104865 MT123 ABCV34_RS05315 cold-shock protein insig. 49 31
  Bosea sp. OAE506 ABIE41_RS08495 cold shock domain-containing protein insig. 52 30
  Azospirillum sp. SherDot2 MPMX19_02734 Cold shock-like protein CspE no data 59 25
  Rhodanobacter denitrificans MT42 LRK55_RS16740 cold-shock protein no data 58 27
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17025 cold-shock protein insig. 58 27
  Azospirillum brasilense Sp245 AZOBR_RS01055 cold-shock protein no data 59 25
  Mycobacterium tuberculosis H37Rv Rv3648c Probable cold shock protein A CspA no data 57 27
  Alteromonas macleodii MIT1002 MIT1002_01248 Cold shock-like protein CspG insig. 59 27
  Marinobacter adhaerens HP15 HP15_2054 cold shock, CspA insig. 53 29
  Rahnella sp. WP5 EX31_RS23030 transcription antiterminator/RNA stability regulator CspE sig. 56 27
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18735 cold-shock protein insig. 51 28
  Ralstonia solanacearum GMI1000 RS_RS22215 cold-shock protein sig. 51 28
  Ralstonia solanacearum PSI07 RPSI07_RS04860 cold-shock protein no data 51 28
  Ralstonia solanacearum UW163 UW163_RS20395 cold-shock protein insig. 51 28
  Vibrio cholerae E7946 ATCC 55056 CSW01_14830 cold-shock protein CspA no data 54 27
  Paraburkholderia sabiae LMG 24235 QEN71_RS35875 cold-shock protein insig. 52 27
  Herbaspirillum seropedicae SmR1 HSERO_RS07020 cold-shock protein no data 51 28
  Erwinia tracheiphila SCR3 LU632_RS16440 cspE transcription antiterminator/RNA stability regulator CspE no data 54 27
  Erwinia amylovora T8 OLJFJH_17275 transcription antiterminator/RNA stability regulator CspE no data 54 27
  Serratia liquefaciens MT49 IAI46_05870 transcription antiterminator/RNA stability regulator CspE insig. 54 27
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4536 Cold shock protein CspE no data 54 27
  Pectobacterium carotovorum WPP14 HER17_RS15290 transcription antiterminator/RNA stability regulator CspE cofit 54 27
  Ralstonia solanacearum GMI1000 RS_RS17205 cold-shock protein strong 54 27
  Ralstonia solanacearum PSI07 RPSI07_RS00010 cold-shock protein no data 54 27
  Methylophilus sp. DMC18 GFF276 Cold shock-like protein CspA insig. 52 28
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04142 putative cold shock protein A no data 50 28
  Azospirillum sp. SherDot2 MPMX19_02057 hypothetical protein insig. 42 39
  Escherichia coli BL21 ECD_00593 constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA-binding protein insig. 54 27
  Dickeya dadantii 3937 DDA3937_RS06115 transcription antiterminator/RNA stability regulator CspE no data 54 27
  Dickeya dianthicola 67-19 HGI48_RS06165 transcription antiterminator/RNA stability regulator CspE no data 54 27
  Dickeya dianthicola ME23 DZA65_RS06510 transcription antiterminator/RNA stability regulator CspE insig. 54 27
  Escherichia fergusonii Becca EFB2_03468 Cold shock-like protein CspE insig. 54 27
  Escherichia coli ECOR27 NOLOHH_23795 cspE transcription antiterminator/RNA stability regulator CspE sig. 54 27
  Escherichia coli ECOR38 HEPCGN_00855 cspE transcription antiterminator/RNA stability regulator CspE sig. 54 27
  Escherichia coli ECRC100 OKFHMN_07420 cspE transcription antiterminator/RNA stability regulator CspE cofit 54 27
  Escherichia coli ECRC101 MCAODC_26635 cspE transcription antiterminator/RNA stability regulator CspE strong 54 27
  Escherichia coli ECRC102 NIAGMN_05475 cspE transcription antiterminator/RNA stability regulator CspE cofit 54 27
  Escherichia coli ECRC62 BNILDI_21805 cspE transcription antiterminator/RNA stability regulator CspE insig. 54 27
  Escherichia coli ECRC98 JDDGAC_11065 cspE transcription antiterminator/RNA stability regulator CspE sig. 54 27
  Escherichia coli ECRC99 KEDOAH_20550 cspE transcription antiterminator/RNA stability regulator CspE no data 54 27
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03082 Cold shock-like protein CspE strong 54 27
  Escherichia coli Nissle 1917 ECOLIN_RS03400 transcription antiterminator/RNA stability regulator CspE cofit 54 27
  Enterobacter asburiae PDN3 EX28DRAFT_2340 Cold shock proteins no data 54 27
  Enterobacter sp. TBS_079 MPMX20_01283 Cold shock-like protein CspE sig. 54 27
  Escherichia coli BW25113 b0623 cspE cold shock protein E (NCBI) strong 54 27
  Klebsiella michiganensis M5al BWI76_RS07980 cold-shock protein no data 54 27
  Klebsiella pneumoniae MKP103 KDGMDA_16340 transcription antiterminator/RNA stability regulator CspE strong 54 27
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04820 cold-shock protein no data 52 27
  Ralstonia solanacearum UW163 UW163_RS08850 cold-shock protein no data 52 27
  Ralstonia solanacearum PSI07 RPSI07_RS12565 cold-shock protein no data 52 28
  Vibrio cholerae E7946 ATCC 55056 CSW01_18795 cold-shock protein CspV insig. 52 28
  Shewanella amazonensis SB2B Sama_2963 cold-shock DNA-binding domain-containing protein (RefSeq) insig. 52 29
  Lysobacter sp. OAE881 ABIE51_RS13800 cold-shock protein strong 50 29
  Ralstonia solanacearum GMI1000 RS_RS12380 cold-shock protein no data 52 28
  Pantoea sp. MT58 IAI47_14075 transcription antiterminator/RNA stability regulator CspE sig. 54 27
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS03205 transcription antiterminator/RNA stability regulator CspE cofit 54 27
  Paraburkholderia sabiae LMG 24235 QEN71_RS02995 cold shock domain-containing protein CspD sig. 51 28
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3660.1 Cold shock protein CspD insig. 56 27
  Ralstonia sp. UNC404CL21Col ABZR87_RS19675 cold-shock protein insig. 52 27
  Burkholderia phytofirmans PsJN BPHYT_RS15720 cold-shock protein no data 51 27
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04084 cold-shock DNA-binding protein family no data 51 27
  Paraburkholderia graminis OAS925 ABIE53_003308 CspA family cold shock protein no data 51 27
  Ralstonia sp. UNC404CL21Col ABZR87_RS00445 cold-shock protein strong 49 28
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23260 cold-shock protein no data 52 27
  Ralstonia solanacearum UW163 UW163_RS16510 cold-shock protein no data 52 27
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3991 Cold shock protein CspG no data 52 29
  Ralstonia sp. UNC404CL21Col ABZR87_RS16270 cold-shock protein strong 52 27
  Serratia liquefaciens MT49 IAI46_08680 cold-shock protein insig. 50 28
  Phaeobacter inhibens DSM 17395 PGA1_c26360 cold shock protein sig. 54 28
  Cupriavidus basilensis FW507-4G11 RR42_RS20855 cold-shock protein sig. 52 27
  Pseudomonas simiae WCS417 PS417_19715 cold-shock protein no data 51 27
  Methylophilus sp. DMC18 GFF958 Cold shock protein CspV insig. 46 28