Homologs of GFF387 from Xanthobacter sp. DMC5

hypothetical protein
SEED: Endoribonuclease L-PSP

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF387 hypothetical protein sig. 100 100
o Rhodopseudomonas palustris CGA009 TX73_016220 RidA family protein sig. 61 100
o Caulobacter crescentus NA1000 CCNA_02241 endoribonuclease L-PSP strong 59 98
o Caulobacter crescentus NA1000 Δfur CCNA_02241 endoribonuclease L-PSP insig. 59 98
o Bosea sp. OAE506 ABIE41_RS18195 RidA family protein insig. 58 99
o Dinoroseobacter shibae DFL-12 Dshi_0137 Endoribonuclease L-PSP (RefSeq) strong 59 99
o Magnetospirillum magneticum AMB-1 AMB_RS13835 RidA family protein insig. 55 100
o Sinorhizobium meliloti 1021 SMc02103 hypothetical protein insig. 52 100
o Phaeobacter inhibens DSM 17395 PGA1_c29320 putative endoribonuclease L-PSP sig. 56 97
o Rhizobium sp. OAE497 ABIE40_RS08890 RidA family protein insig. 53 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08380 RidA family protein strong 57 97
o Agrobacterium fabrum C58 Atu1372 hypothetical protein strong 54 99
o Rhodospirillum rubrum S1H Rru_A2457 Endoribonuclease L-PSP (NCBI) no data 52 98
o Mycobacterium tuberculosis H37Rv Rv3678c Conserved protein no data 51 97
o Burkholderia phytofirmans PsJN BPHYT_RS13395 endoribonuclease L-PSP insig. 49 95
o Cellulophaga baltica 18 M666_RS04690 RidA family protein insig. 50 96
o Azospirillum sp. SherDot2 MPMX19_00535 hypothetical protein insig. 53 100
o Azospirillum brasilense Sp245 AZOBR_RS05145 endoribonuclease sig. 50 100
o Pseudomonas sp. SVBP6 COO64_RS23680 RidA family protein insig. 44 99
  Agrobacterium fabrum C58 Atu3265 hypothetical protein insig. 50 95
o Ralstonia solanacearum GMI1000 RS_RS04880 RidA family protein no data 45 99
  Burkholderia phytofirmans PsJN BPHYT_RS05960 endoribonuclease L-PSP strong 44 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00270 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family strong 44 98
o Paraburkholderia graminis OAS925 ABIE53_001398 enamine deaminase RidA (YjgF/YER057c/UK114 family) strong 44 98
o Variovorax sp. SCN45 GFF116 RidA/YER057c/UK114 superfamily, group 1 insig. 49 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS24665 RidA family protein insig. 43 98
o Acidovorax sp. GW101-3H11 Ac3H11_268 Bona fide RidA/YjgF/TdcF/RutC subgroup sig. 47 97
o Cupriavidus basilensis FW507-4G11 RR42_RS26810 endoribonuclease insig. 47 99
o Variovorax sp. OAS795 ABID97_RS20010 RidA family protein no data 50 97
  Burkholderia phytofirmans PsJN BPHYT_RS10460 endoribonuclease no data 47 95
o Herbaspirillum seropedicae SmR1 HSERO_RS09045 translation initiation inhibitor protein no data 45 98
  Bosea sp. OAE506 ABIE41_RS21995 RidA family protein insig. 43 97
  Rhizobium sp. OAE497 ABIE40_RS26075 RidA family protein insig. 50 95
o Sphingobium sp. HT1-2 GFF3346 RidA/YER057c/UK114 superfamily, group 1 cofit 51 97
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2685 Putative translation initiation inhibitor, yjgF family strong 50 98
  Variovorax sp. SCN45 GFF2690 RidA/YER057c/UK114 superfamily, group 1 no data 50 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS09820 RidA family protein insig. 47 100
o Ralstonia solanacearum PSI07 RPSI07_RS19360 RidA family protein no data 45 99
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2090 Putative translation initiation inhibitor, yjgF family insig. 39 97
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14100 RidA family protein no data 45 99
o Ralstonia solanacearum UW163 UW163_RS15710 RidA family protein insig. 45 99
  Cupriavidus basilensis FW507-4G11 RR42_RS14585 L-PSP family endoribonuclease sig. 45 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5556 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 44 97
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10595 NAD(P)H:quinone oxidoreductase, type IV insig. 38 96
o Pseudomonas sp. BP01 JOY50_RS05535 RidA family protein no data 42 98
o Pseudomonas simiae WCS417 PS417_06660 endoribonuclease insig. 46 99
  Pseudomonas sp. BP01 JOY50_RS05210 RidA family protein no data 40 97
  Variovorax sp. SCN45 GFF4151 RidA/YER057c/UK114 superfamily, group 1 insig. 40 90
o Pseudomonas fluorescens SBW25 PFLU_RS06690 RidA family protein insig. 44 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS06690 RidA family protein insig. 44 99
  Acidovorax sp. GW101-3H11 Ac3H11_3793 Bona fide RidA/YjgF/TdcF/RutC subgroup insig. 42 84
  Burkholderia phytofirmans PsJN BPHYT_RS35560 endoribonuclease L-PSP insig. 42 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3623 Endoribonuclease L-PSP insig. 43 97
  Ralstonia sp. UNC404CL21Col ABZR87_RS08380 RidA family protein insig. 37 98
  Pseudomonas simiae WCS417 PS417_14845 endoribonuclease L-PSP insig. 44 82
  Variovorax sp. SCN45 GFF3327 RidA/YER057c/UK114 superfamily, group 1 insig. 39 98
o Pseudomonas aeruginosa PA14 IKLFDK_03535 RidA family protein insig. 38 88
o Pseudomonas aeruginosa MRSN321 DY961_RS08425 RidA family protein insig. 38 88
o Pseudomonas aeruginosa PUPa3 DQ20_RS44425 RidA family protein insig. 38 88
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01472 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 39 97
  Pseudomonas fluorescens FW300-N2E3 AO353_14625 hypothetical protein insig. 37 82
  Pseudomonas sp. DMC3 GFF4390 hypothetical protein insig. 39 82
  Variovorax sp. SCN45 GFF195 RidA/YER057c/UK114 superfamily, group 1 insig. 39 82
  Pseudomonas fluorescens SBW25 PFLU_RS16860 RidA family protein insig. 40 82
  Pseudomonas fluorescens SBW25-INTG PFLU_RS16860 RidA family protein strong 40 82
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4927 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein insig. 40 82
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1690 Putative translation initiation inhibitor, yjgF family no data 44 77
o Shewanella oneidensis MR-1 SO1960 conserved hypothetical protein (NCBI ptt file) insig. 31 99
  Variovorax sp. OAS795 ABID97_RS02865 RidA family protein insig. 40 75
  Variovorax sp. OAS795 ABID97_RS01340 RidA family protein insig. 31 97
o Desulfovibrio vulgaris Miyazaki F DvMF_1512 endoribonuclease L-PSP (RefSeq) no data 32 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS41190 RidA family protein no data 33 92
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1205.1 hypothetical protein cofit 34 84
  Azospirillum brasilense Sp245 AZOBR_RS32435 dfrA insig. 39 85
  Klebsiella michiganensis M5al BWI76_RS02985 reactive intermediate/imine deaminase strong 37 83
  Methylophilus sp. DMC18 GFF1301 2-iminobutanoate/2-iminopropanoate deaminase cofit 31 86
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS08965 2-iminobutanoate/2-iminopropanoate deaminase strong 35 90
  Pantoea sp. MT58 IAI47_16870 2-iminobutanoate/2-iminopropanoate deaminase strong 34 90
  Bacteroides thetaiotaomicron VPI-5482 BT1336 putative translation initiation inhibitor (NCBI ptt file) strong 32 86
  Bacteroides ovatus ATCC 8483 BACOVA_00589 putative endoribonuclease L-PSP cofit 30 94
  Escherichia coli BL21 ECD_04111 enamine/imine deaminase, reaction intermediate detoxification strong 36 83
  Escherichia fergusonii Becca EFB2_04290 2-iminobutanoate/2-iminopropanoate deaminase sig. 36 83
  Escherichia coli ECOR27 NOLOHH_04135 ridA 2-iminobutanoate/2-iminopropanoate deaminase insig. 36 83
  Escherichia coli ECOR38 HEPCGN_10070 ridA 2-iminobutanoate/2-iminopropanoate deaminase insig. 36 83
  Escherichia coli ECRC100 OKFHMN_11875 ridA 2-iminobutanoate/2-iminopropanoate deaminase cofit 36 83
  Escherichia coli ECRC101 MCAODC_02380 ridA 2-iminobutanoate/2-iminopropanoate deaminase strong 36 83
  Escherichia coli ECRC102 NIAGMN_09725 ridA 2-iminobutanoate/2-iminopropanoate deaminase strong 36 83
  Escherichia coli ECRC62 BNILDI_07375 ridA 2-iminobutanoate/2-iminopropanoate deaminase cofit 36 83
  Escherichia coli ECRC98 JDDGAC_15515 ridA 2-iminobutanoate/2-iminopropanoate deaminase cofit 36 83
  Escherichia coli ECRC99 KEDOAH_16280 ridA 2-iminobutanoate/2-iminopropanoate deaminase no data 36 83
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03791 2-iminobutanoate/2-iminopropanoate deaminase insig. 36 83
  Escherichia coli Nissle 1917 ECOLIN_RS24615 2-iminobutanoate/2-iminopropanoate deaminase insig. 36 83
  Escherichia coli BW25113 b4243 yjgF orf, hypothetical protein (VIMSS) strong 36 83
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14050 ridA 2-iminobutanoate/2-iminopropanoate deaminase no data 35 90
  Erwinia tracheiphila SCR3 LU632_RS20960 ridA 2-iminobutanoate/2-iminopropanoate deaminase sig. 35 90
  Rhodanobacter sp. FW510-T8 OKGIIK_12095 ridA reactive intermediate/imine deaminase strong 34 84
  Pseudomonas syringae pv. syringae B728a Psyr_0208 endoribonuclease L-PSP strong 31 85
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0208 endoribonuclease L-PSP strong 31 85
  Pseudomonas sp. S08-1 OH686_13545 RidA/YER057c/UK114 superfamily protein strong 31 87
  Rahnella sp. WP5 EX31_RS12775 2-iminobutanoate/2-iminopropanoate deaminase insig. 35 90