Homologs of Psest_3423 from Pseudomonas stutzeri RCH2

Site-specific recombinase XerC
SEED: Phage integrase family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_3423 Site-specific recombinase XerC insig. 100 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS38195 tyrosine-type recombinase/integrase insig. 91 100
o Pseudomonas sp. BP01 JOY50_RS12925 tyrosine-type recombinase/integrase insig. 92 100
o Pseudomonas putida KT2440 PP_3791 Site-specific recombinase, phage integrase family insig. 90 100
o Pseudomonas orientalis W4I3 QF045_RS20340 tyrosine-type recombinase/integrase insig. 85 100
o Lysobacter sp. OAE881 ABIE51_RS03485 tyrosine-type recombinase/integrase insig. 70 95
o Marinobacter adhaerens HP15 HP15_4164 phage integrase family protein insig. 62 95
o Escherichia coli Nissle 1917 ECOLIN_RS01460 site-specific integrase insig. 62 95
o Klebsiella michiganensis M5al BWI76_RS13030 site-specific recombinase, phage integrase family protein insig. 63 95
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03410 tyrosine-type recombinase/integrase insig. 62 96
o Alteromonas macleodii MIT1002 MIT1002_02605 site-specific tyrosine recombinase XerC insig. 59 96
  Alteromonas macleodii MIT1002 MIT1002_02610 site-specific tyrosine recombinase XerC insig. 59 96
o Bosea sp. OAE506 ABIE41_RS06940 tyrosine-type recombinase/integrase insig. 62 95
o Phaeobacter inhibens DSM 17395 PGA1_c19380 putative phage integrase insig. 58 95
o Caulobacter crescentus NA1000 CCNA_01844 DNA integration/recombination/inversion protein sig. 61 96
o Caulobacter crescentus NA1000 Δfur CCNA_01844 DNA integration/recombination/inversion protein cofit 61 96
o Dinoroseobacter shibae DFL-12 Dshi_2590 integrase family protein (RefSeq) insig. 58 95
o Rhodopseudomonas palustris CGA009 TX73_006840 tyrosine-type recombinase/integrase insig. 62 95
o Magnetospirillum magneticum AMB-1 AMB_RS18475 integrase insig. 56 97
o Sphingobium sp. HT1-2 GFF5357 Phage integrase insig. 56 95
  Sphingobium sp. HT1-2 GFF5340 Phage integrase cofit 57 95
o Shewanella loihica PV-4 Shew_0251 phage integrase family protein (RefSeq) insig. 47 94
  Sinorhizobium meliloti 1021 SMa1874 hypothetical protein insig. 65 55
  Alteromonas macleodii MIT1002 MIT1002_00614 site-specific tyrosine recombinase XerC no data 65 50
  Alteromonas macleodii MIT1002 MIT1002_02616 site-specific tyrosine recombinase XerC no data 65 50
  Paraburkholderia graminis OAS925 ABIE53_000988 hypothetical protein sig. 44 53
  Bosea sp. OAE506 ABIE41_RS19005 integrase no data 49 44
  Sphingobium sp. HT1-2 GFF5358 Phage integrase cofit 66 23
  Pseudomonas stutzeri RCH2 Psest_0601 hypothetical protein sig. 89 17
  Caulobacter crescentus NA1000 CCNA_02470 DNA integration/recombination/inversion protein cofit 37 46
  Caulobacter crescentus NA1000 Δfur CCNA_02470 DNA integration/recombination/inversion protein cofit 37 46
  Xanthobacter sp. DMC5 GFF3081 Tyrosine recombinase XerD no data 30 77
  Phaeobacter inhibens DSM 17395 PGA1_c14060 tyrosine recombinase XerD strong 28 74
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04165 site-specific tyrosine recombinase XerD no data 27 79
  Lysobacter sp. OAE881 ABIE51_RS04495 site-specific tyrosine recombinase XerD strong 29 71
  Bifidobacterium breve UCC2003 BBR_RS16655 tyrosine recombinase XerC strong 28 84
  Magnetospirillum magneticum AMB-1 AMB_RS19880 site-specific tyrosine recombinase XerD cofit 27 74
  Azospirillum brasilense Sp245 AZOBR_RS03240 recombinase XerD insig. 25 73
  Sphingobium sp. HT1-2 GFF2416 Site-specific tyrosine recombinase XerD strong 28 70
  Azospirillum sp. SherDot2 MPMX19_02643 Tyrosine recombinase XerD no data 23 73
  Desulfovibrio vulgaris Hildenborough JW710 DVU2066 xerC site-specific recombinase, phage integrase family (TIGR) sig. 32 72
  Acinetobacter radioresistens SK82 MPMX26_02230 Tyrosine recombinase XerC no data 25 92
  Shewanella loihica PV-4 Shew_0325 tyrosine recombinase XerC (RefSeq) sig. 29 74
  Dinoroseobacter shibae DFL-12 Dshi_1611 integrase family protein (RefSeq) strong 25 73
  Desulfovibrio vulgaris Miyazaki F DvMF_0767 integrase family protein (RefSeq) insig. 31 66
  Paraburkholderia graminis OAS925 ABIE53_001488 site-specific recombinase XerD sig. 31 72
  Rhodospirillum rubrum S1H Rru_A3738 Phage integrase (NCBI) no data 27 83
  Burkholderia phytofirmans PsJN BPHYT_RS05275 integrase no data 31 72
  Burkholderia phytofirmans PsJN BPHYT_RS32945 integrase no data 31 72
  Sinorhizobium meliloti 1021 SMc00691 site-specific tyrosine recombinase XerD sig. 28 70
  Rhizobium sp. OAE497 ABIE40_RS17685 site-specific tyrosine recombinase XerD sig. 25 73
  Kangiella aquimarina DSM 16071 B158DRAFT_0244 tyrosine recombinase XerC subunit strong 24 74
  Herbaspirillum seropedicae SmR1 HSERO_RS21475 recombinase XerC insig. 27 72
  Dinoroseobacter shibae DFL-12 Dshi_3629 integrase family protein (RefSeq) no data 28 72
  Dinoroseobacter shibae DFL-12 Dshi_3661 integrase family protein (RefSeq) no data 28 72
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04705 site-specific tyrosine recombinase XerD strong 27 85
  Dinoroseobacter shibae DFL-12 Dshi_3700 integrase family protein (RefSeq) insig. 28 70
  Shewanella oneidensis MR-1 SO1448 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 27 71
  Paraburkholderia sabiae LMG 24235 QEN71_RS42750 tyrosine-type recombinase/integrase insig. 27 78
  Shewanella sp. ANA-3 Shewana3_1799 phage integrase family protein (RefSeq) insig. 26 71
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12210 tyrosine recombinase XerC insig. 29 76
  Sinorhizobium meliloti 1021 SMa1620 integrase/recombinase no data 27 77
  Sinorhizobium meliloti 1021 SMa2175 Integrase/recombinase no data 27 77
  Vibrio cholerae E7946 ATCC 55056 CSW01_00650 tyrosine recombinase XerC strong 26 78
  Rhodanobacter sp. FW510-T8 OKGIIK_11520 xerD site-specific tyrosine recombinase XerD sig. 25 71
  Mycobacterium tuberculosis H37Rv Rv2646 Probable integrase insig. 38 39
  Erwinia amylovora T8 OLJFJH_08835 site-specific tyrosine recombinase XerD strong 25 71
  Paraburkholderia graminis OAS925 ABIE53_003361 integrase/recombinase XerD strong 28 71
  Shewanella loihica PV-4 Shew_1254 phage integrase family protein (RefSeq) insig. 28 71
  Marinobacter adhaerens HP15 HP15_762 site-specific tyrosine recombinase XerD insig. 26 74
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10220 site-specific tyrosine recombinase XerD insig. 25 76
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS15880 site-specific tyrosine recombinase XerD cofit 23 78
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4441.1 Tyrosine recombinase XerD sig. 35 30
  Burkholderia phytofirmans PsJN BPHYT_RS15950 tyrosine recombinase XerD sig. 28 71
  Ralstonia solanacearum PSI07 RPSI07_RS23690 tyrosine recombinase XerC insig. 27 80
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS05285 site-specific tyrosine recombinase XerD insig. 25 71
  Pantoea sp. MT58 IAI47_03820 site-specific tyrosine recombinase XerD strong 23 78
  Acidovorax sp. GW101-3H11 Ac3H11_302 Tyrosine recombinase XerD no data 27 71
  Marinobacter adhaerens HP15 HP15_250 site-specific tyrosine recombinase XerC strong 27 79
  Rhizobium sp. OAE497 ABIE40_RS29765 tyrosine-type recombinase/integrase insig. 21 72
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3595 Site-specific recombinase XerD sig. 24 68
  Pseudomonas fluorescens FW300-N2E3 AO353_09050 recombinase XerC sig. 29 71
  Pseudomonas sp. RS175 PFR28_00331 Tyrosine recombinase XerD strong 25 71
  Cupriavidus basilensis FW507-4G11 RR42_RS00615 recombinase XerC sig. 28 75
  Bacteroides stercoris CC31F HMPREF1181_RS15715 site-specific integrase insig. 27 70
  Dickeya dianthicola 67-19 HGI48_RS03440 site-specific tyrosine recombinase XerD insig. 25 71
  Dickeya dianthicola ME23 DZA65_RS03485 site-specific tyrosine recombinase XerD no data 25 71
  Rhodanobacter denitrificans MT42 LRK55_RS04515 site-specific tyrosine recombinase XerD strong 24 71
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04735 site-specific tyrosine recombinase XerD insig. 24 71
  Alteromonas macleodii MIT1002 MIT1002_00613 hypothetical protein no data 50 16
  Alteromonas macleodii MIT1002 MIT1002_02617 hypothetical protein no data 50 16
  Enterobacter asburiae PDN3 EX28DRAFT_2945 tyrosine recombinase XerD insig. 25 71
  Dickeya dadantii 3937 DDA3937_RS03300 site-specific tyrosine recombinase XerD insig. 23 78
  Dechlorosoma suillum PS Dsui_1217 tyrosine recombinase XerD cofit 32 38
  Dechlorosoma suillum PS Dsui_0651 tyrosine recombinase XerC insig. 29 71
  Bacteroides ovatus ATCC 8483 BACOVA_05411 site-specific recombinase, phage integrase family insig. 26 76
  Bacteroides thetaiotaomicron VPI-5482 BT4617 integrase (NCBI ptt file) insig. 26 76
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1244 Site-specific recombinase XerD no data 28 70
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1749 Site-specific recombinase XerD no data 28 70
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1789 Site-specific recombinase XerD no data 28 70