Homologs of GFF2534 from Sphingobium sp. HT1-2

Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy
SEED: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF2534 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy cofit 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3601 Predicted amidophosphoribosyltransferases insig. 55 92
o Azospirillum sp. SherDot2 MPMX19_02427 hypothetical protein insig. 43 89
o Magnetospirillum magneticum AMB-1 AMB_RS08105 amidophosphoribosyltransferase insig. 44 92
o Rhizobium sp. OAE497 ABIE40_RS17355 ComF family protein insig. 42 90
o Xanthobacter sp. DMC5 GFF104 hypothetical protein insig. 42 91
o Bosea sp. OAE506 ABIE41_RS08035 ComF family protein insig. 41 92
o Sinorhizobium meliloti 1021 SMc02444 hypothetical protein insig. 41 96
o Agrobacterium fabrum C58 Atu3512 competence protein F insig. 41 93
o Rhodospirillum rubrum S1H Rru_A0737 Phosphoribosyltransferase (NCBI) cofit 40 91
o Azospirillum brasilense Sp245 AZOBR_RS02910 phosphoribosyltransferase insig. 43 94
o Phaeobacter inhibens DSM 17395 PGA1_c34720 phosphoribosyl transferase-like protein sig. 38 93
o Rhodopseudomonas palustris CGA009 TX73_003090 ComF family protein insig. 39 90
o Pseudomonas sp. DMC3 GFF77 hypothetical protein cofit 37 89
o Pseudomonas simiae WCS417 PS417_26010 amidophosphoribosyltransferase insig. 34 89
o Pseudomonas fluorescens SBW25 PFLU_RS27655 ComF family protein insig. 34 89
o Pseudomonas fluorescens SBW25-INTG PFLU_RS27655 ComF family protein insig. 34 89
o Caulobacter crescentus NA1000 CCNA_00873 amidophosphoribosyltransferase family protein sig. 37 94
o Caulobacter crescentus NA1000 Δfur CCNA_00873 amidophosphoribosyltransferase family protein cofit 37 94
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2485 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 36 82
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1146 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 34 89
o Dickeya dadantii 3937 DDA3937_RS19650 DNA utilization protein GntX insig. 39 85
o Pseudomonas segetis P6 ACVTMO_RS03755 ComF family protein insig. 34 84
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13555 ComF family protein insig. 38 93
o Pseudomonas sp. SVBP6 COO64_RS22730 ComF family protein insig. 35 87
o Pseudomonas fluorescens FW300-N2E3 AO353_07530 amidophosphoribosyltransferase insig. 33 90
o Pseudomonas syringae pv. syringae B728a Psyr_4688 Phosphoribosyltransferase insig. 35 84
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4688 Phosphoribosyltransferase insig. 35 84
o Pseudomonas stutzeri RCH2 Psest_0410 Predicted amidophosphoribosyltransferases insig. 34 85
o Cupriavidus basilensis FW507-4G11 RR42_RS01860 amidophosphoribosyltransferase insig. 36 91
o Pseudomonas sp. S08-1 OH686_10360 Competence protein F-related, phosphoribosyltransferase domain / protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 34 88
o Pseudomonas sp. RS175 PFR28_04104 hypothetical protein insig. 35 89
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS15860 ComF family protein insig. 37 87
o Pectobacterium carotovorum WPP14 HER17_RS01550 DNA utilization protein GntX insig. 34 84
o Dickeya dianthicola 67-19 HGI48_RS19780 DNA utilization protein GntX insig. 37 85
o Dickeya dianthicola ME23 DZA65_RS20870 DNA utilization protein GntX insig. 37 85
o Pseudomonas aeruginosa PA14 IKLFDK_22980 amidophosphoribosyltransferase sig. 34 94
o Pseudomonas aeruginosa PUPa3 DQ20_RS36875 ComF family protein sig. 34 94
o Dinoroseobacter shibae DFL-12 Dshi_3500 competence protein F, putative (RefSeq) insig. 36 88
o Rhodanobacter denitrificans MT42 LRK55_RS09910 ComF family protein insig. 34 89
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10270 ComF family protein insig. 34 89
o Pseudomonas aeruginosa MRSN321 DY961_RS22450 ComF family protein sig. 34 94
o Pseudomonas putida KT2440 PP_0361 putative Competence protein ComF insig. 34 89
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05323 hypothetical protein insig. 32 89
o Serratia liquefaciens MT49 IAI46_23830 DNA utilization protein GntX insig. 35 83
o Rhodanobacter sp. FW510-T8 OKGIIK_13640 Competence protein ComF insig. 35 93
  Methylophilus sp. DMC18 GFF1681 hypothetical protein insig. 33 83
o Rahnella sp. WP5 EX31_RS04920 DNA utilization protein GntX insig. 33 83
o Kangiella aquimarina DSM 16071 B158DRAFT_0863 Predicted amidophosphoribosyltransferases insig. 31 87
o Erwinia amylovora T8 OLJFJH_04185 DNA utilization protein GntX insig. 34 89
o Pseudomonas sp. BP01 JOY50_RS17925 ComF family protein insig. 32 89
o Pantoea sp. MT58 IAI47_01785 DNA utilization protein GntX insig. 36 84
o Herbaspirillum seropedicae SmR1 HSERO_RS20810 amidophosphoribosyltransferase strong 35 89
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4758 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 36 89
o Pseudomonas fluorescens FW300-N2C3 AO356_14130 amidophosphoribosyltransferase insig. 36 89
o Shewanella loihica PV-4 Shew_3629 competence protein ComF (RefSeq) insig. 35 92
o Dechlorosoma suillum PS Dsui_1296 putative amidophosphoribosyltransferase cofit 34 96
  Vibrio cholerae E7946 ATCC 55056 CSW01_13720 DNA utilization protein GntX insig. 34 75
o Bacteroides ovatus ATCC 8483 BACOVA_02030 comF family protein cofit 30 82
  Pseudomonas orientalis W4I3 QF045_RS00420 ComF family protein cofit 33 78
o Lysobacter sp. OAE881 ABIE51_RS01135 ComF family protein insig. 31 90
o Klebsiella michiganensis M5al BWI76_RS26625 gluconate transporter periplasmic gluconate-binding protein insig. 34 84
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS03050 ComF family protein insig. 34 98
o Acidovorax sp. GW101-3H11 Ac3H11_3895 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 36 82
o Burkholderia phytofirmans PsJN BPHYT_RS02625 competence protein ComF sig. 34 87
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01997 comF family protein insig. 34 87
o Paraburkholderia graminis OAS925 ABIE53_000670 ComF family protein insig. 36 87
o Shewanella amazonensis SB2B Sama_3504 competence protein ComF (RefSeq) insig. 34 89
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF604 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 34 76
  Escherichia coli BW25113 b3413 yhgH orf, hypothetical protein (VIMSS) insig. 34 76
  Escherichia coli BL21 ECD_03265 DNA catabolic protein insig. 33 76
  Escherichia coli ECOR27 NOLOHH_08780 gntX DNA utilization protein GntX insig. 33 76
  Escherichia coli ECRC100 OKFHMN_16995 gntX DNA utilization protein GntX cofit 33 76
  Escherichia coli ECRC101 MCAODC_07525 gntX DNA utilization protein GntX insig. 33 76
  Escherichia coli ECRC102 NIAGMN_14765 gntX DNA utilization protein GntX insig. 33 76
  Escherichia coli ECRC62 BNILDI_02735 gntX DNA utilization protein GntX cofit 33 76
  Escherichia coli ECRC98 JDDGAC_20625 gntX DNA utilization protein GntX insig. 33 76
  Escherichia coli ECRC99 KEDOAH_11145 gntX DNA utilization protein GntX no data 33 76
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00290 hypothetical protein sig. 33 76
o Shewanella oneidensis MR-1 SO4625 comF competence protein ComF (NCBI ptt file) insig. 33 89
  Escherichia coli ECOR38 HEPCGN_15805 gntX DNA utilization protein GntX insig. 33 76
  Escherichia coli Nissle 1917 ECOLIN_RS19495 DNA utilization protein GntX insig. 33 76
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19150 amidophosphoribosyltransferase insig. 28 80
o Shewanella sp. ANA-3 Shewana3_4009 competence protein ComF (RefSeq) insig. 34 89
  Escherichia fergusonii Becca EFB2_00415 Putative ribose-phosphate pyrophosphokinase insig. 33 76
  Bacteroides thetaiotaomicron VPI-5482 BT2800 putative amidophosphoribosyl-transferase (NCBI ptt file) insig. 29 80
  Variovorax sp. SCN45 GFF2294 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 35 76
o Klebsiella pneumoniae MKP103 KDGMDA_07020 DNA utilization protein GntX sig. 33 84
o Paraburkholderia sabiae LMG 24235 QEN71_RS01480 ComF family protein insig. 32 86
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS11300 phosphoribosyltransferase family protein insig. 29 93
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS10930 amidophosphoribosyltransferase no data 31 91
o Ralstonia solanacearum UW163 UW163_RS02650 amidophosphoribosyltransferase insig. 31 91
o Bacteroides stercoris CC31F HMPREF1181_RS00975 ComF family protein insig. 29 81
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_11920 Phosphoribosyltransferase cofit 34 74
  Erwinia tracheiphila SCR3 LU632_RS22980 phosphoribosyltransferase insig. 34 74
o Ralstonia solanacearum PSI07 RPSI07_RS22380 amidophosphoribosyltransferase strong 30 91
  Desulfovibrio vulgaris Miyazaki F DvMF_2857 phosphoribosyltransferase (RefSeq) insig. 36 67
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.506.1 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 33 84
  Variovorax sp. OAS795 ABID97_RS23980 ComF family protein insig. 34 76
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18305 DNA utilization protein GntX cofit 34 75