Homologs of Dsui_2530 from Dechlorosoma suillum PS

pseudouridine synthase, RluA family
SEED: Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase D

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dechlorosoma suillum PS Dsui_2530 pseudouridine synthase, RluA family sig. 100 100
  Methylophilus sp. DMC18 GFF1213 Ribosomal large subunit pseudouridine synthase D insig. 59 79
  Escherichia coli BL21 ECD_02484 23S rRNA pseudouridine(1911,1915,1917) synthase strong 54 79
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01112 Ribosomal large subunit pseudouridine synthase D sig. 54 79
  Escherichia coli BW25113 b2594 rluD 23S rRNA pseudouridine synthase (NCBI) no data 54 79
  Escherichia fergusonii Becca EFB2_01296 Ribosomal large subunit pseudouridine synthase D sig. 54 79
  Escherichia coli ECOR27 NOLOHH_12925 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 54 79
  Escherichia coli ECRC100 OKFHMN_21250 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 54 79
  Escherichia coli ECRC101 MCAODC_11780 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 54 79
  Escherichia coli ECRC102 NIAGMN_19020 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 54 79
  Escherichia coli ECRC62 BNILDI_11730 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 54 79
  Escherichia coli ECRC98 JDDGAC_24915 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 54 79
  Escherichia coli ECRC99 KEDOAH_06970 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD no data 54 79
  Escherichia coli Nissle 1917 ECOLIN_RS14675 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 54 79
  Escherichia coli ECOR38 HEPCGN_20375 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 54 79
  Shewanella loihica PV-4 Shew_2950 RluA family pseudouridine synthase (RefSeq) strong 55 77
  Pseudomonas sp. BP01 JOY50_RS27130 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 55 78
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00848 ribosomal large subunit pseudouridine synthase D (EC 5.4.99.-) insig. 55 79
  Enterobacter asburiae PDN3 EX28DRAFT_2695 pseudouridine synthase, RluA family cofit 54 79
  Pseudomonas putida KT2440 PP_0623 23S rRNA pseudouridine(1911,1915,1917) synthase no data 55 79
  Klebsiella michiganensis M5al BWI76_RS21450 23S rRNA pseudouridine(1911/1915/1917) synthase sig. 54 79
o Alteromonas macleodii MIT1002 MIT1002_02679 Ribosomal large subunit pseudouridine synthase D cofit 53 80
  Paraburkholderia graminis OAS925 ABIE53_002062 23S rRNA pseudouridine1911/1915/1917 synthase strong 55 79
  Dickeya dadantii 3937 DDA3937_RS16110 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 54 79
  Klebsiella pneumoniae MKP103 KDGMDA_02140 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 54 79
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4182 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) strong 53 79
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1362.1 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 52 86
o Ralstonia solanacearum PSI07 RPSI07_RS15970 RluA family pseudouridine synthase insig. 52 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS22215 RluA family pseudouridine synthase no data 55 79
  Enterobacter sp. TBS_079 MPMX20_03463 Ribosomal large subunit pseudouridine synthase D strong 54 79
  Burkholderia phytofirmans PsJN BPHYT_RS09135 ribosomal large subunit pseudouridine synthase D sig. 54 79
  Serratia liquefaciens MT49 IAI46_03985 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 54 79
  Pseudomonas stutzeri RCH2 Psest_0709 pseudouridine synthase, RluA family strong 54 79
  Dickeya dianthicola ME23 DZA65_RS17330 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 54 79
o Ralstonia solanacearum GMI1000 RS_RS08205 RluA family pseudouridine synthase sig. 53 82
  Shewanella amazonensis SB2B Sama_2605 pseudouridylate synthase (RefSeq) no data 56 78
  Dickeya dianthicola 67-19 HGI48_RS16235 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 54 79
o Lysobacter sp. OAE881 ABIE51_RS04885 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 53 83
o Ralstonia sp. UNC404CL21Col ABZR87_RS13315 RluA family pseudouridine synthase strong 53 79
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS01520 RluA family pseudouridine synthase insig. 52 83
o Ralstonia solanacearum UW163 UW163_RS14830 RluA family pseudouridine synthase insig. 52 83
  Pseudomonas aeruginosa PA14 IKLFDK_00810 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 55 79
  Shewanella sp. ANA-3 Shewana3_3171 ribosomal large subunit pseudouridine synthase D (RefSeq) strong 54 77
  Rahnella sp. WP5 EX31_RS07570 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 53 79
  Erwinia amylovora T8 OLJFJH_09725 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 53 79
o Marinobacter adhaerens HP15 HP15_527 pseudouridine synthase, RluA family strong 52 81
  Pseudomonas sp. SVBP6 COO64_RS11055 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 54 79
  Kangiella aquimarina DSM 16071 B158DRAFT_2532 Pseudouridylate synthases, 23S RNA-specific strong 52 78
  Herbaspirillum seropedicae SmR1 HSERO_RS15070 ribosomal large subunit pseudouridine synthase D insig. 57 76
  Pseudomonas fluorescens FW300-N2E3 AO353_14220 ribosomal large subunit pseudouridine synthase D strong 52 79
  Pseudomonas fluorescens FW300-N2C3 AO356_15925 ribosomal large subunit pseudouridine synthase D strong 52 79
  Pseudomonas sp. S08-1 OH686_16410 LSU rRNA pseudouridine(1911/1915/1917) synthase cofit 53 79
  Pectobacterium carotovorum WPP14 HER17_RS05400 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 52 79
  Pseudomonas sp. DMC3 GFF4004 Ribosomal large subunit pseudouridine synthase D cofit 52 79
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_26870 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 52 79
  Erwinia tracheiphila SCR3 LU632_RS16945 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 52 79
  Pseudomonas syringae pv. syringae B728a Psyr_0726 ribosomal large subunit pseudouridine synthase D strong 51 79
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0726 ribosomal large subunit pseudouridine synthase D strong 51 79
  Rhodanobacter sp. FW510-T8 OKGIIK_01790 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 53 80
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5127 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 52 78
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS05045 23S rRNA pseudouridine(1911/1915/1917) synthase RluD no data 54 80
  Pantoea sp. MT58 IAI47_04425 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 52 79
  Pseudomonas fluorescens SBW25 PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD insig. 51 79
  Pseudomonas fluorescens SBW25-INTG PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 51 79
  Pseudomonas simiae WCS417 PS417_03820 ribosomal large subunit pseudouridine synthase D no data 51 79
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00969 Ribosomal large subunit pseudouridine synthase D cofit 51 79
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16540 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 52 79
o Cupriavidus basilensis FW507-4G11 RR42_RS07590 pseudouridine synthase strong 48 86
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2822 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 53 78
  Pseudomonas sp. RS175 PFR28_03748 Ribosomal large subunit pseudouridine synthase D strong 52 78
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS10965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 53 79
  Rhodanobacter denitrificans MT42 LRK55_RS04745 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 53 80
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 53 80
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1493 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 52 78
  Vibrio cholerae E7946 ATCC 55056 CSW01_03695 ribosomal large subunit pseudouridine synthase D strong 51 77
  Acinetobacter baumannii LAC-4 RR41_RS15070 23S rRNA pseudouridine(1911/1915/1917) synthase RluD insig. 51 77
  Acidovorax sp. GW101-3H11 Ac3H11_1787 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 51 74
  Acinetobacter radioresistens SK82 MPMX26_00735 Ribosomal large subunit pseudouridine synthase D strong 49 77
  Variovorax sp. SCN45 GFF988 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 48 79
  Sphingobium sp. HT1-2 GFF4062 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 47 77
  Castellaniella sp019104865 MT123 ABCV34_RS01885 RluA family pseudouridine synthase strong 50 80
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0664 pseudouridine synthase, RluA family strong 46 77
  Variovorax sp. OAS795 ABID97_RS14190 RluA family pseudouridine synthase strong 48 76
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4870 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 46 80
  Xanthobacter sp. DMC5 GFF2508 Ribosomal large subunit pseudouridine synthase D insig. 47 77
  Rhodospirillum rubrum S1H Rru_A1111 Pseudouridine synthase, RluD (NCBI) strong 46 79
  Cellulophaga baltica 18 M666_RS09010 RluA family pseudouridine synthase sig. 44 77
  Rhodopseudomonas palustris CGA009 TX73_001905 RluA family pseudouridine synthase strong 45 79
  Agrobacterium fabrum C58 Atu2443 ribosomal large subunit pseudouridine synthase, RluD subfamily no data 46 78
  Sinorhizobium meliloti 1021 SMc00647 ribosomal large subunit pseudouridine synthase strong 45 78
  Synechocystis sp000284455 PCC 6803 SGL_RS11530 RluA family pseudouridine synthase strong 48 77
  Phocaeicola dorei CL03T12C01 ABI39_RS02845 RluA family pseudouridine synthase strong 44 77
  Magnetospirillum magneticum AMB-1 AMB_RS16095 RluA family pseudouridine synthase insig. 45 79
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08615 RluA family pseudouridine synthase strong 44 77
  Rhizobium sp. OAE497 ABIE40_RS14790 RluA family pseudouridine synthase sig. 44 77
  Bacteroides stercoris CC31F HMPREF1181_RS03250 RluA family pseudouridine synthase strong 43 77
  Bacteroides thetaiotaomicron VPI-5482 BT3712 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) strong 43 76
  Bacteroides ovatus ATCC 8483 BACOVA_03528 pseudouridine synthase, RluA family strong 43 76
  Caulobacter crescentus NA1000 CCNA_00485 ribosomal large subunit pseudouridine synthase D strong 44 77
  Caulobacter crescentus NA1000 Δfur CCNA_00485 ribosomal large subunit pseudouridine synthase D cofit 44 77