Homologs of DZA65_RS09710 from Dickeya dianthicola ME23

30S ribosomal protein S12 methylthiotransferase RimO
SEED: Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase
KEGG: ribosomal protein S12 methylthiotransferase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dickeya dianthicola ME23 DZA65_RS09710 30S ribosomal protein S12 methylthiotransferase RimO insig. 100 100
o Dickeya dianthicola 67-19 HGI48_RS09400 30S ribosomal protein S12 methylthiotransferase RimO insig. 100 100
o Dickeya dadantii 3937 DDA3937_RS09385 30S ribosomal protein S12 methylthiotransferase RimO insig. 97 100
o Pectobacterium carotovorum WPP14 HER17_RS12755 30S ribosomal protein S12 methylthiotransferase RimO insig. 90 93
o Escherichia coli BL21 ECD_00802 ribosomal protein S12 methylthiotransferase insig. 86 93
o Escherichia coli ECOR27 NOLOHH_22430 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 86 93
o Escherichia coli ECOR38 HEPCGN_01970 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 86 93
o Escherichia coli ECRC101 MCAODC_25275 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 86 93
o Escherichia coli ECRC102 NIAGMN_04105 rimO 30S ribosomal protein S12 methylthiotransferase RimO cofit 86 93
o Escherichia coli ECRC62 BNILDI_20690 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 86 93
o Escherichia coli ECRC98 JDDGAC_09695 rimO 30S ribosomal protein S12 methylthiotransferase RimO sig. 86 93
o Escherichia coli ECRC99 KEDOAH_21850 rimO 30S ribosomal protein S12 methylthiotransferase RimO no data 86 93
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02875 Ribosomal protein S12 methylthiotransferase RimO insig. 86 93
o Escherichia coli BW25113 b0835 yliG predicted SAM-dependent methyltransferase (NCBI) insig. 86 93
o Escherichia fergusonii Becca EFB2_03271 Ribosomal protein S12 methylthiotransferase RimO insig. 86 93
o Escherichia coli ECRC100 OKFHMN_06060 rimO 30S ribosomal protein S12 methylthiotransferase RimO cofit 86 93
o Escherichia coli Nissle 1917 ECOLIN_RS04440 30S ribosomal protein S12 methylthiotransferase RimO no data 86 93
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF731 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase insig. 86 93
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_20035 rimO 30S ribosomal protein S12 methylthiotransferase RimO cofit 84 93
o Erwinia tracheiphila SCR3 LU632_RS09580 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 84 93
o Klebsiella pneumoniae MKP103 KDGMDA_17375 30S ribosomal protein S12 methylthiotransferase RimO insig. 85 93
o Enterobacter asburiae PDN3 EX28DRAFT_2131 ribosomal protein S12 methylthiotransferase RimO insig. 85 93
o Klebsiella michiganensis M5al BWI76_RS09115 30S ribosomal protein S12 methylthiotransferase RimO sig. 85 93
o Enterobacter sp. TBS_079 MPMX20_01473 Ribosomal protein S12 methylthiotransferase RimO insig. 85 93
o Vibrio cholerae E7946 ATCC 55056 CSW01_13260 30S ribosomal protein S12 methylthiotransferase RimO insig. 74 100
o Shewanella sp. ANA-3 Shewana3_3627 MiaB-like tRNA modifying enzyme YliG (RefSeq) sig. 71 100
o Shewanella amazonensis SB2B Sama_0485 MiaB-like putative RNA modifying enzyme YliG (RefSeq) insig. 72 100
o Shewanella oneidensis MR-1 SO4072 yliG MiaB-like putative RNA modifying enzyme YliG (NCBI ptt file) sig. 71 100
o Alteromonas macleodii MIT1002 MIT1002_01933 Ribosomal protein S12 methylthiotransferase RimO cofit 73 99
o Marinobacter adhaerens HP15 HP15_2459 MiaB-like tRNA modifying enzyme YliG insig. 71 96
o Pseudomonas sp. RS175 PFR28_00486 Ribosomal protein S12 methylthiotransferase RimO insig. 72 93
o Pseudomonas aeruginosa MRSN321 DY961_RS07875 rimO;go_function=S-methyltransferase 30S ribosomal protein S12 methylthiotransferase RimO sig. 73 93
o Pseudomonas aeruginosa PA14 IKLFDK_04105 30S ribosomal protein S12 methylthiotransferase RimO sig. 73 93
o Pseudomonas aeruginosa PUPa3 DQ20_RS44925 rimO;go_function=S-methyltransferase 30S ribosomal protein S12 methylthiotransferase RimO insig. 73 93
o Kangiella aquimarina DSM 16071 B158DRAFT_2522 SSU ribosomal protein S12P methylthiotransferase (EC 2.-.-.-) insig. 70 93
o Pseudomonas sp. DMC3 GFF2126 Ribosomal protein S12 methylthiotransferase RimO insig. 71 93
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4653 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase insig. 71 93
o Pseudomonas segetis P6 ACVTMO_RS08100 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 72 93
o Pseudomonas stutzeri RCH2 Psest_2632 ribosomal protein S12 methylthiotransferase RimO sig. 72 92
o Pseudomonas sp. S08-1 OH686_18875 ribosomal protein S12 methylthiotransferase RimO cofit 71 93
o Pseudomonas fluorescens FW300-N2E3 AO353_16875 ribosomal protein S12 methylthiotransferase RimO sig. 71 93
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3160 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase insig. 71 93
o Pseudomonas sp. SVBP6 COO64_RS20000 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 71 92
o Pseudomonas putida KT2440 PP_1197 ribosomal protein S12 methylthiotransferase insig. 71 92
o Pseudomonas orientalis W4I3 QF045_RS08795 30S ribosomal protein S12 methylthiotransferase RimO insig. 71 93
o Pseudomonas sp. BP01 JOY50_RS01920 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 71 92
o Azospirillum brasilense Sp245 AZOBR_RS14980 ribosomal protein S12 methylthiotransferase insig. 70 93
o Pseudomonas fluorescens SBW25 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO insig. 71 93
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO sig. 71 93
o Pseudomonas simiae WCS417 PS417_05880 ribosomal protein S12 methylthiotransferase insig. 71 93
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01347 Ribosomal protein S12 methylthiotransferase RimO cofit 71 93
o Pseudomonas fluorescens FW300-N2C3 AO356_05600 ribosomal protein S12 methylthiotransferase RimO sig. 71 93
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2978 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase sig. 71 93
o Azospirillum sp. SherDot2 MPMX19_05761 Ribosomal protein S12 methylthiotransferase RimO cofit 70 92
o Acinetobacter radioresistens SK82 MPMX26_01294 Ribosomal protein S12 methylthiotransferase RimO strong 68 93
o Pseudomonas syringae pv. syringae B728a Psyr_1392 SSU ribosomal protein S12P methylthiotransferase insig. 70 92
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1392 SSU ribosomal protein S12P methylthiotransferase insig. 70 92
o Acinetobacter baumannii LAC-4 RR41_RS08040 30S ribosomal protein S12 methylthiotransferase RimO no data 68 93
o Castellaniella sp019104865 MT123 ABCV34_RS14230 30S ribosomal protein S12 methylthiotransferase RimO cofit 68 93
o Rhodospirillum rubrum S1H Rru_A2811 hypothetical protein (NCBI) sig. 68 93
o Ralstonia solanacearum GMI1000 RS_RS08245 30S ribosomal protein S12 methylthiotransferase RimO insig. 67 93
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS01480 30S ribosomal protein S12 methylthiotransferase RimO insig. 66 96
o Ralstonia solanacearum UW163 UW163_RS14790 30S ribosomal protein S12 methylthiotransferase RimO insig. 66 96
o Ralstonia solanacearum PSI07 RPSI07_RS16010 30S ribosomal protein S12 methylthiotransferase RimO insig. 66 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS13275 30S ribosomal protein S12 methylthiotransferase RimO insig. 67 93
o Burkholderia phytofirmans PsJN BPHYT_RS09170 ribosomal protein S12 methylthiotransferase RimO no data 66 92
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00855 SSU ribosomal protein S12P methylthiotransferase insig. 66 92
o Cupriavidus basilensis FW507-4G11 RR42_RS07640 ribosomal protein S12 methylthiotransferase insig. 66 93
o Dechlorosoma suillum PS Dsui_2540 ribosomal protein S12 methylthiotransferase RimO sig. 66 93
o Paraburkholderia graminis OAS925 ABIE53_002068 ribosomal protein S12 methylthiotransferase insig. 66 92
o Paraburkholderia sabiae LMG 24235 QEN71_RS22185 30S ribosomal protein S12 methylthiotransferase RimO strong 63 98
o Methylophilus sp. DMC18 GFF1218 Ribosomal protein S12 methylthiotransferase RimO insig. 66 93
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1940.1 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase insig. 65 96
o Lysobacter sp. OAE881 ABIE51_RS08160 30S ribosomal protein S12 methylthiotransferase RimO insig. 67 92
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS01780 30S ribosomal protein S12 methylthiotransferase RimO cofit 66 92
o Rhodanobacter denitrificans MT42 LRK55_RS01560 30S ribosomal protein S12 methylthiotransferase RimO insig. 66 92
o Herbaspirillum seropedicae SmR1 HSERO_RS15005 ribosomal protein S12 methylthiotransferase insig. 66 92
o Magnetospirillum magneticum AMB-1 AMB_RS15345 30S ribosomal protein S12 methylthiotransferase RimO cofit 65 93
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS08260 30S ribosomal protein S12 methylthiotransferase RimO insig. 64 92
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS08100 30S ribosomal protein S12 methylthiotransferase RimO insig. 65 92
o Xanthobacter sp. DMC5 GFF1050 Ribosomal protein S12 methylthiotransferase RimO insig. 64 93
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4923 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase insig. 60 97
o Bosea sp. OAE506 ABIE41_RS15895 30S ribosomal protein S12 methylthiotransferase RimO insig. 63 93
o Rhodanobacter sp. FW510-T8 OKGIIK_04755 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 64 92
o Rhodopseudomonas palustris CGA009 TX73_013865 30S ribosomal protein S12 methylthiotransferase RimO insig. 64 92
o Variovorax sp. SCN45 GFF400 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) insig. 61 92
o Acidovorax sp. GW101-3H11 Ac3H11_364 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase insig. 62 92
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0282 ribosomal protein S12 methylthiotransferase RimO cofit 62 92
o Variovorax sp. OAS795 ABID97_RS17220 30S ribosomal protein S12 methylthiotransferase RimO insig. 60 92
o Sphingobium sp. HT1-2 GFF2264 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) cofit 62 92
o Dinoroseobacter shibae DFL-12 Dshi_2618 MiaB-like tRNA modifying enzyme YliG (RefSeq) insig. 60 97
o Phaeobacter inhibens DSM 17395 PGA1_c24370 ribosomal protein S12 methylthiotransferase RimO insig. 58 100
o Synechocystis sp000284455 PCC 6803 SGL_RS15315 30S ribosomal protein S12 methylthiotransferase RimO strong 42 92
o Cellulophaga baltica 18 M666_RS09445 30S ribosomal protein S12 methylthiotransferase RimO insig. 40 93
o Synechococcus elongatus PCC 7942 Synpcc7942_2512 hypothetical protein strong 41 92
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0564 ribosomal protein S12 methylthiotransferase RimO insig. 38 93
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15425 30S ribosomal protein S12 methylthiotransferase RimO insig. 36 93
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15685 30S ribosomal protein S12 methylthiotransferase RimO insig. 38 93
o Bacteroides thetaiotaomicron VPI-5482 BT0913 putative Fe-S oxidoreductase (NCBI ptt file) sig. 37 93
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16365 30S ribosomal protein S12 methylthiotransferase RimO sig. 36 93