Homologs of def-1 from Shewanella oneidensis MR-1

def-1: polypeptide deformylase (NCBI ptt file)
SEED: Peptide deformylase (EC 3.5.1.88)
KEGG: peptide deformylase

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO0032 def-1 polypeptide deformylase (NCBI ptt file) sig. 100 100
o Shewanella sp. ANA-3 Shewana3_0035 def peptide deformylase (RefSeq) sig. 97 100
o Shewanella loihica PV-4 Shew_3736 peptide deformylase (RefSeq) no data 88 100
o Shewanella amazonensis SB2B Sama_0043 def peptide deformylase (RefSeq) no data 85 99
o Alteromonas macleodii MIT1002 MIT1002_00020 Peptide deformylase 1 no data 64 100
o Dickeya dianthicola 67-19 HGI48_RS19215 peptide deformylase no data 64 100
o Dickeya dianthicola ME23 DZA65_RS20340 peptide deformylase no data 64 100
o Dickeya dadantii 3937 DDA3937_RS19125 peptide deformylase no data 63 100
o Pectobacterium carotovorum WPP14 HER17_RS02225 peptide deformylase cofit 63 100
o Rahnella sp. WP5 EX31_RS15975 peptide deformylase insig. 63 100
o Pantoea sp. MT58 IAI47_02290 peptide deformylase no data 63 100
o Kangiella aquimarina DSM 16071 B158DRAFT_0398 peptide deformylase insig. 63 98
o Serratia liquefaciens MT49 IAI46_23265 peptide deformylase insig. 61 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_00235 peptide deformylase insig. 61 100
o Enterobacter asburiae PDN3 EX28DRAFT_0041 peptide deformylase no data 63 96
o Enterobacter sp. TBS_079 MPMX20_04194 Peptide deformylase insig. 63 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2392 Peptide deformylase (EC 3.5.1.88) cofit 60 100
o Klebsiella michiganensis M5al BWI76_RS25670 peptide deformylase no data 60 100
o Erwinia tracheiphila SCR3 LU632_RS22470 def peptide deformylase no data 58 100
o Escherichia coli BL21 ECD_03137 peptide deformylase no data 60 100
o Escherichia fergusonii Becca EFB2_00537 Peptide deformylase no data 60 100
o Escherichia coli ECOR27 NOLOHH_09330 def peptide deformylase no data 60 100
o Escherichia coli ECRC101 OKFHMN_17530 def peptide deformylase no data 60 100
o Escherichia coli ECRC101 MCAODC_08060 def peptide deformylase no data 60 100
o Escherichia coli ECRC102 NIAGMN_15300 def peptide deformylase no data 60 100
o Escherichia coli ECRC62 BNILDI_02190 def peptide deformylase no data 60 100
o Escherichia coli ECRC98 JDDGAC_21160 def peptide deformylase no data 60 100
o Escherichia coli ECRC99 KEDOAH_10610 def peptide deformylase no data 60 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00417 Peptide deformylase no data 60 100
o Escherichia coli Nissle 1917 ECOLIN_RS18865 peptide deformylase no data 60 100
o Escherichia coli BW25113 b3287 def peptide deformylase (NCBI) no data 60 100
o Escherichia coli ECOR38 HEPCGN_16360 def peptide deformylase no data 59 100
o Acinetobacter radioresistens SK82 MPMX26_00116 Peptide deformylase no data 60 100
o Lysobacter sp. OAE881 ABIE51_RS02245 peptide deformylase sig. 58 99
o Pseudomonas putida KT2440 PP_0068 peptide deformylase no data 60 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4743.1 Peptide deformylase (EC 3.5.1.88) strong 56 99
o Pseudomonas sp. S08-1 OH686_12515 peptide deformylase no data 58 99
o Pseudomonas fluorescens FW300-N2E3 AO353_10640 peptide deformylase no data 57 99
o Pseudomonas stutzeri RCH2 Psest_0023 peptide deformylase no data 58 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_650 Peptide deformylase (EC 3.5.1.88) no data 57 99
o Pseudomonas sp. RS175 PFR28_04661 Peptide deformylase no data 57 99
o Pseudomonas fluorescens FW300-N2C3 AO356_11285 peptide deformylase no data 57 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4123 Peptide deformylase (EC 3.5.1.88) no data 57 99
o Herbaspirillum seropedicae SmR1 HSERO_RS23405 peptide deformylase no data 56 98
o Marinobacter adhaerens HP15 HP15_3744 peptide deformylase no data 57 98
o Pseudomonas syringae pv. syringae B728a Psyr_0019 peptide deformylase no data 58 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0019 peptide deformylase no data 58 99
o Variovorax sp. OAS795 ABID97_RS01820 peptide deformylase no data 56 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1912 Peptide deformylase (EC 3.5.1.88) no data 56 99
o Variovorax sp. SCN45 GFF5491 Peptide deformylase (EC 3.5.1.88) strong 54 100
o Pseudomonas simiae WCS417 PS417_00095 peptide deformylase no data 55 99
o Pseudomonas fluorescens SBW25 PFLU_RS00090 peptide deformylase insig. 54 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS00090 peptide deformylase no data 54 99
o Dechlorosoma suillum PS Dsui_0817 peptide deformylase no data 55 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS00155 peptide deformylase no data 54 97
o Cupriavidus basilensis FW507-4G11 RR42_RS20470 peptide deformylase no data 54 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2573 Peptide deformylase (EC 3.5.1.88) strong 56 98
o Paraburkholderia graminis OAS925 ABIE53_000388 peptide deformylase no data 54 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02241 peptide deformylase no data 53 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13880 peptide deformylase sig. 52 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS04975 peptide deformylase strong 52 99
o Ralstonia solanacearum PSI07 RPSI07_RS23600 peptide deformylase no data 54 96
o Burkholderia phytofirmans PsJN BPHYT_RS01455 peptide deformylase strong 52 97
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS09765 peptide deformylase no data 52 96
o Ralstonia solanacearum UW163 UW163_RS03815 peptide deformylase no data 52 96
o Ralstonia solanacearum GMI1000 RS_RS00350 peptide deformylase insig. 51 100
o Rhodanobacter sp. FW510-T8 OKGIIK_13780 Peptide deformylase 2 no data 52 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10135 peptide deformylase no data 51 100
o Rhodanobacter denitrificans MT42 LRK55_RS09775 peptide deformylase cofit 51 100
  Shewanella loihica PV-4 Shew_2103 def peptide deformylase (RefSeq) insig. 51 96
  Shewanella sp. ANA-3 Shewana3_2319 def peptide deformylase (RefSeq) insig. 51 97
o Acidovorax sp. GW101-3H11 Ac3H11_4409 Peptide deformylase (EC 3.5.1.88) no data 55 82
  Shewanella oneidensis MR-1 SO2530 def-3 polypeptide deformylase (NCBI ptt file) insig. 50 97
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0644 peptide deformylase no data 51 99
  Vibrio cholerae E7946 ATCC 55056 CSW01_14750 peptide deformylase insig. 47 100
o Rhodopseudomonas palustris CGA009 TX73_003215 peptide deformylase no data 49 100
o Castellaniella sp019104865 MT123 ABCV34_RS14200 peptide deformylase no data 46 98
o Rhizobium sp. OAE497 ABIE40_RS01895 peptide deformylase no data 48 99
o Sinorhizobium meliloti 1021 SMc01101 peptide deformylase no data 47 98
o Phaeobacter inhibens DSM 17395 PGA1_c00870 peptide deformylase Def no data 47 97
o Agrobacterium fabrum C58 Atu0366 polypeptide deformylase no data 47 98
o Caulobacter crescentus NA1000 CCNA_00273 peptide deformylase no data 50 90
o Caulobacter crescentus NA1000 Δfur CCNA_00273 peptide deformylase cofit 50 90
  Azospirillum brasilense Sp245 AZOBR_RS03580 peptide deformylase no data 47 96
o Dinoroseobacter shibae DFL-12 Dshi_0179 peptide deformylase (RefSeq) no data 43 100
o Magnetospirillum magneticum AMB-1 AMB_RS01235 peptide deformylase no data 45 98
o Desulfovibrio vulgaris Miyazaki F DvMF_2039 peptide deformylase (RefSeq) no data 45 96
o Bosea sp. OAE506 ABIE41_RS00175 peptide deformylase no data 39 99
  Azospirillum sp. SherDot2 MPMX19_02007 Peptide deformylase 1 no data 46 99
o Rhodospirillum rubrum S1H Rru_A3350 Peptide deformylase (NCBI) no data 48 100
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12325 peptide deformylase no data 41 90
o Desulfovibrio vulgaris Hildenborough JW710 DVU3366 def polypeptide deformylase (TIGR) no data 47 95
  Synechococcus elongatus PCC 7942 Synpcc7942_1340 def peptide deformylase no data 47 89
  Dinoroseobacter shibae DFL-12 Dshi_0180 peptide deformylase (RefSeq) insig. 37 94
o Fusobacterium nucleatum SB010 HUW76_05815 peptide deformylase no data 39 99
  Rhizobium sp. OAE497 ABIE40_RS09810 peptide deformylase insig. 36 98
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20875 peptide deformylase no data 39 98
o Bacteroides ovatus ATCC 8483 BACOVA_01774 putative peptide deformylase no data 37 99
  Bosea sp. OAE506 ABIE41_RS23305 peptide deformylase insig. 36 98
  Sinorhizobium meliloti 1021 SMc01262 peptide deformylase insig. 35 99