Homologs of rfbC from Escherichia coli BW25113

rfbC: dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI)
SEED: dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)
KEGG: dTDP-4-dehydrorhamnose 3,5-epimerase

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Escherichia coli BW25113 b2038 rfbC dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI) strong 100 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3890 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) strong 65 97
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01663 dTDP-4-dehydrorhamnose 3,5-epimerase strong 62 95
o Klebsiella pneumoniae MKP103 KDGMDA_26175 dTDP-4-dehydrorhamnose 3 5-epimerase no data 62 95
o Ralstonia solanacearum PSI07 RPSI07_RS20600 dTDP-4-dehydrorhamnose 3,5-epimerase no data 62 91
o Ralstonia solanacearum GMI1000 RS_RS03445 dTDP-4-dehydrorhamnose 3,5-epimerase no data 62 91
o Pseudomonas simiae WCS417 PS417_01320 dTDP-4-dehydrorhamnose 3,5-epimerase no data 63 92
o Pseudomonas aeruginosa PA14 IKLFDK_27665 dTDP-4-dehydrorhamnose 3 5-epimerase no data 61 92
o Pseudomonas sp. RS175 PFR28_04892 dTDP-4-dehydrorhamnose 3,5-epimerase no data 62 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS12660 dTDP-4-dehydrorhamnose 3,5-epimerase no data 61 91
o Ralstonia solanacearum UW163 UW163_RS00905 dTDP-4-dehydrorhamnose 3,5-epimerase no data 61 91
o Escherichia coli BL21 ECD_01944 dTDP-4-dehydrorhamnose 3,5-epimerase (RmlC) no data 61 96
o Escherichia coli ECOR38 HEPCGN_03120 rfbC dTDP-4-dehydrorhamnose 3,5-epimerase no data 61 96
o Acidovorax sp. GW101-3H11 Ac3H11_1883 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) no data 61 92
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1664 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) insig. 61 92
o Pseudomonas fluorescens GW456-L13 PfGW456L13_399 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) no data 62 92
o Pseudomonas fluorescens FW300-N2E3 AO353_11875 dTDP-4-dehydrorhamnose 3,5-epimerase no data 61 92
o Pseudomonas fluorescens FW300-N2C3 AO356_10050 dTDP-4-dehydrorhamnose 3,5-epimerase no data 59 96
o Rahnella sp. WP5 EX31_RS11510 dTDP-4-dehydrorhamnose 3,5-epimerase cofit 57 97
o Pseudomonas syringae pv. syringae B728a Psyr_4936 dTDP-4-dehydrorhamnose 3,5-epimerase no data 60 96
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4936 dTDP-4-dehydrorhamnose 3,5-epimerase no data 60 96
o Pseudomonas stutzeri RCH2 Psest_4264 dTDP-4-dehydrorhamnose 3,5-epimerase no data 59 92
o Pseudomonas putida KT2440 PP_1782 dTDP-4-dehydrorhamnose 3,5-epimerase insig. 58 92
o Variovorax sp. SCN45 GFF6879 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) no data 60 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1840 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) no data 62 92
o Methylophilus sp. DMC18 GFF1323 dTDP-4-dehydrorhamnose 3,5-epimerase no data 61 92
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04271 dTDP-4-dehydrorhamnose 3,5-epimerase cofit 59 91
o Klebsiella michiganensis M5al BWI76_RS19055 dTDP-4-dehydrorhamnose 3,5-epimerase strong 58 96
o Pseudomonas sp. SVBP6 COO64_RS00580 rfbC dTDP-4-dehydrorhamnose 3,5-epimerase no data 62 92
o Pseudomonas sp. DMC3 GFF4157 dTDP-4-dehydrorhamnose 3,5-epimerase no data 61 92
o Escherichia fergusonii Becca EFB2_01816 dTDP-4-dehydrorhamnose 3,5-epimerase no data 60 91
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3880 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) no data 60 91
o Variovorax sp. OAS795 ABID97_RS05675 dTDP-4-dehydrorhamnose 3,5-epimerase no data 57 96
o Pseudomonas fluorescens SBW25 PFLU_RS01415 dTDP-4-dehydrorhamnose 3,5-epimerase no data 60 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS01415 dTDP-4-dehydrorhamnose 3,5-epimerase no data 60 96
o Pseudomonas sp. S08-1 OH686_14370 dTDP-4-dehydrorhamnose 3,5-epimerase no data 61 92
o Synechococcus elongatus PCC 7942 Synpcc7942_2098 rfbC dTDP-4-dehydrorhamnose 3,5-epimerase strong 58 96
o Shewanella loihica PV-4 Shew_1404 dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) strong 55 98
o Acinetobacter radioresistens SK82 MPMX26_00453 dTDP-4-dehydrorhamnose 3,5-epimerase strong 58 92
  Pseudomonas putida KT2440 PP_0265 dTDP-4-dehydrorhamnose 3,5-epimerase insig. 57 96
o Pseudomonas sp. BP01 JOY50_RS26410 rfbC dTDP-4-dehydrorhamnose 3,5-epimerase insig. 58 96
o Dechlorosoma suillum PS Dsui_1951 dTDP-4-dehydrorhamnose 3,5-epimerase no data 60 85
o Synechocystis sp000284455 PCC 6803 SGL_RS12335 dTDP-4-dehydrorhamnose 3,5-epimerase strong 57 96
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_18995 rfbC dTDP-4-dehydrorhamnose 3 5-epimerase cofit 58 91
o Erwinia tracheiphila SCR3 LU632_RS08865 rfbC dTDP-4-dehydrorhamnose 3,5-epimerase strong 58 91
o Paraburkholderia sabiae LMG 24235 QEN71_RS25745 dTDP-4-dehydrorhamnose 3,5-epimerase no data 59 91
o Shewanella sp. ANA-3 Shewana3_1382 dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) no data 53 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04824 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) no data 57 91
o Paraburkholderia graminis OAS925 ABIE53_001139 dTDP-4-dehydrorhamnose 3,5-epimerase no data 60 85
o Alteromonas macleodii MIT1002 MIT1002_03559 dTDP-4-dehydrorhamnose 3,5-epimerase no data 58 92
o Burkholderia phytofirmans PsJN BPHYT_RS04275 dTDP-4-dehydrorhamnose 3,5-epimerase no data 59 85
o Dickeya dadantii 3937 DDA3937_RS06745 dTDP-4-dehydrorhamnose 3,5-epimerase sig. 54 96
o Cupriavidus basilensis FW507-4G11 RR42_RS15830 dTDP-4-dehydrorhamnose 3,5-epimerase no data 54 96
o Enterobacter asburiae PDN3 EX28DRAFT_0520 dTDP-4-dehydrorhamnose 3,5-epimerase no data 55 96
  Pseudomonas sp. BP01 JOY50_RS16045 rfbC dTDP-4-dehydrorhamnose 3,5-epimerase insig. 58 85
o Bacteroides ovatus ATCC 8483 BACOVA_02563 dTDP-4-dehydrorhamnose 3,5-epimerase no data 55 91
o Bacteroides thetaiotaomicron VPI-5482 BT0828 dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) insig. 55 92
o Ralstonia sp. UNC404CL21Col ABZR87_RS08660 dTDP-4-dehydrorhamnose 3,5-epimerase strong 56 91
o Dickeya dianthicola 67-19 HGI48_RS06765 dTDP-4-dehydrorhamnose 3,5-epimerase cofit 54 96
o Dickeya dianthicola ME23 DZA65_RS07120 dTDP-4-dehydrorhamnose 3,5-epimerase insig. 54 96
o Phocaeicola dorei CL03T12C01 ABI39_RS11030 dTDP-4-dehydrorhamnose 3,5-epimerase insig. 56 92
o Bacteroides stercoris CC31F HMPREF1181_RS14380 dTDP-4-dehydrorhamnose 3,5-epimerase no data 57 91
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02617 dTDP-4-dehydrorhamnose 3,5-epimerase cofit 55 97
  Phocaeicola dorei CL03T12C01 ABI39_RS12050 dTDP-4-dehydrorhamnose 3,5-epimerase insig. 55 91
o Fusobacterium nucleatum SB010 HUW76_01310 dTDP-4-dehydrorhamnose 3,5-epimerase no data 49 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5937 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) insig. 56 92
  Phocaeicola dorei CL03T12C01 ABI39_RS13380 dTDP-4-dehydrorhamnose 3,5-epimerase sig. 56 92
  Bacteroides thetaiotaomicron VPI-5482 BT0464 dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) sig. 55 91
  Bacteroides thetaiotaomicron VPI-5482 BT1338 dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) sig. 54 92
  Burkholderia phytofirmans PsJN BPHYT_RS30990 dTDP-4-dehydrorhamnose 3,5-epimerase insig. 54 91
  Shewanella sp. ANA-3 Shewana3_1392 dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) no data 55 91
o Marinobacter adhaerens HP15 HP15_p187g51 dTDP-4-dehydrorhamnose 3,5-epimerase cofit 53 92
o Shewanella oneidensis MR-1 SO3160 rfbC dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) no data 53 91
o Caulobacter crescentus NA1000 CCNA_03748 dTDP-4-dehydrorhamnose 3,5-epimerase strong 52 85
o Caulobacter crescentus NA1000 Δfur CCNA_03748 dTDP-4-dehydrorhamnose 3,5-epimerase cofit 52 85
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19335 dTDP-4-dehydrorhamnose 3,5-epimerase no data 54 85
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17420 dTDP-4-dehydrorhamnose 3,5-epimerase no data 51 97
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06635 dTDP-4-dehydrorhamnose 3,5-epimerase no data 53 92
  Phocaeicola dorei CL03T12C01 ABI39_RS20430 dTDP-4-dehydrorhamnose 3,5-epimerase sig. 53 92
o Shewanella amazonensis SB2B Sama_2237 dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) no data 51 94
o Desulfovibrio vulgaris Miyazaki F DvMF_2692 dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) strong 51 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS18725 dTDP-4-dehydrorhamnose 3,5-epimerase strong 50 99
o Rhodanobacter sp. FW510-T8 OKGIIK_01165 rfbC dTDP-4-dehydrorhamnose 3,5-epimerase strong 51 99
o Cellulophaga baltica 18 M666_RS05575 dTDP-4-dehydrorhamnose 3,5-epimerase no data 46 97
o Rhodanobacter denitrificans MT42 LRK55_RS05430 dTDP-4-dehydrorhamnose 3,5-epimerase no data 51 99
  Shewanella loihica PV-4 Shew_3703 dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) insig. 51 96
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS04355 dTDP-4-dehydrorhamnose 3,5-epimerase no data 51 96
o Castellaniella sp019104865 MT123 ABCV34_RS02485 dTDP-4-dehydrorhamnose 3,5-epimerase no data 51 96
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS05675 dTDP-4-dehydrorhamnose 3,5-epimerase no data 50 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4484.1 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) no data 51 96
o Herbaspirillum seropedicae SmR1 HSERO_RS22055 dTDP-4-dehydrorhamnose 3,5-epimerase no data 51 92
o Lysobacter sp. OAE881 ABIE51_RS15610 dTDP-4-dehydrorhamnose 3,5-epimerase no data 49 96
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS00700 dTDP-4-dehydrorhamnose 3,5-epimerase no data 51 92
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15705 dTDP-4-dehydrorhamnose 3,5-epimerase no data 49 93
o Azospirillum sp. SherDot2 MPMX19_06724 dTDP-4-dehydrorhamnose 3,5-epimerase no data 48 98
o Rhodopseudomonas palustris CGA009 TX73_000610 dTDP-4-dehydrorhamnose 3,5-epimerase strong 49 93
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04895 dTDP-4-dehydrorhamnose 3,5-epimerase no data 46 96
o Rhodospirillum rubrum S1H Rru_B0038 dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI) sig. 46 96
  Paraburkholderia graminis OAS925 ABIE53_001708 dTDP-4-dehydrorhamnose 3,5-epimerase sig. 44 96
o Phaeobacter inhibens DSM 17395 PGA1_65p00250 dTDP-4-dehydrorhamnose 3,5-epimerase RfbC no data 49 92