Homologs of ycgF from Escherichia coli BW25113

ycgF: predicted FAD-binding phosphodiesterase (NCBI)
SEED: Hypothetical protein ycgF

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
o Escherichia coli ECOR27 NOLOHH_20865 bluF blue light-responsive regulator BluF no data 100 100
o Escherichia coli ECRC62 BNILDI_19030 bluF blue light-responsive regulator BluF insig. 100 100
  Escherichia coli BW25113 b1163 ycgF predicted FAD-binding phosphodiesterase (NCBI) sig. 100 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02529 Blue light- and temperature-regulated antirepressor BluF insig. 100 100
o Escherichia coli BL21 ECD_01138 anti-repressor for YcgE, blue light-responsive; FAD-binding; inactive c-di-GMP phosphodiesterase-like EAL domain protein insig. 100 100
o Escherichia coli ECRC99 KEDOAH_25150 bluF blue light-responsive regulator BluF no data 98 100
o Escherichia fergusonii Becca EFB2_02770 Blue light- and temperature-regulated antirepressor BluF insig. 96 100
o Escherichia coli Nissle 1917 ECOLIN_RS07035 blue light-responsive regulator BluF insig. 96 100
o Enterobacter sp. TBS_079 MPMX20_01941 Blue light- and temperature-regulated antirepressor BluF sig. 62 100
o Klebsiella michiganensis M5al BWI76_RS08695 hypothetical protein insig. 61 100
o Enterobacter asburiae PDN3 EX28DRAFT_1689 FOG: EAL domain insig. 61 100
o Pantoea sp. MT58 IAI47_10700 diguanylate phosphodiesterase insig. 58 100
o Rahnella sp. WP5 EX31_RS02350 diguanylate phosphodiesterase insig. 56 100
  Pantoea sp. MT58 IAI47_21340 diguanylate phosphodiesterase insig. 51 100
  Klebsiella michiganensis M5al BWI76_RS12405 diguanylate phosphodiesterase sig. 48 100
  Pantoea sp. MT58 IAI47_21380 diguanylate phosphodiesterase insig. 45 100
  Enterobacter sp. TBS_079 MPMX20_02352 Blue light- and temperature-regulated antirepressor BluF insig. 44 99
  Enterobacter asburiae PDN3 EX28DRAFT_1120 FOG: EAL domain insig. 43 99
  Klebsiella michiganensis M5al BWI76_RS15405 diguanylate phosphodiesterase insig. 43 100
o Alteromonas macleodii MIT1002 MIT1002_00127 Blue light- and temperature-regulated antirepressor YcgF insig. 34 99
  Pseudomonas stutzeri RCH2 Psest_3507 FOG: EAL domain insig. 34 64
  Vibrio cholerae E7946 ATCC 55056 CSW01_08250 EAL domain-containing protein cofit 31 60
  Pseudomonas syringae pv. syringae B728a Psyr_0171 EAL insig. 33 60
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0171 EAL insig. 33 60
  Kangiella aquimarina DSM 16071 B158DRAFT_2250 FOG: EAL domain insig. 32 56
  Burkholderia phytofirmans PsJN BPHYT_RS07825 diguanylate phosphodiesterase no data 32 60
  Marinobacter adhaerens HP15 HP15_818 protein containing diguanylate phosphodiesterase, predicted domains insig. 32 56
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05923 EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) insig. 31 57
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08280 EAL domain-containing protein insig. 33 57
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3916.1 EAL domain protein insig. 33 57
  Azospirillum sp. SherDot2 MPMX19_01086 Blue light- and temperature-regulated antirepressor BluF insig. 33 55
  Rhodospirillum rubrum S1H Rru_A2934 Putative diguanylate phosphodiesterase (EAL domain) (NCBI) cofit 34 57
  Pseudomonas fluorescens SBW25 PFLU_RS01300 EAL domain-containing protein insig. 32 56
  Pseudomonas fluorescens SBW25-INTG PFLU_RS01300 EAL domain-containing protein insig. 32 56
  Pseudomonas sp. S08-1 OH686_16160 EAL domain protein insig. 31 56
  Azospirillum brasilense Sp245 AZOBR_RS06725 diguanylate phosphodiesterase insig. 34 53
  Variovorax sp. OAS795 ABID97_RS12070 EAL domain-containing protein insig. 30 56
  Pseudomonas simiae WCS417 PS417_01190 diguanylate phosphodiesterase insig. 31 56
  Pseudomonas fluorescens FW300-N2C3 AO356_29575 diguanylate phosphodiesterase insig. 31 55
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1825 FOG: EAL domain protein insig. 30 55
  Magnetospirillum magneticum AMB-1 AMB_RS23905 EAL domain-containing protein insig. 32 55
  Pseudomonas sp. RS175 PFR28_01998 Blue light- and temperature-regulated antirepressor BluF insig. 31 56
  Pseudomonas fluorescens FW300-N2C3 AO356_19330 diguanylate phosphodiesterase insig. 29 54
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5779 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 29 54
  Pseudomonas sp. RS175 PFR28_03170 hypothetical protein insig. 29 54
  Caulobacter crescentus NA1000 CCNA_03250 EAL-domain diguanylate phosphodiesterase cofit 30 55
  Caulobacter crescentus NA1000 Δfur CCNA_03250 EAL-domain diguanylate phosphodiesterase cofit 30 55
  Shewanella loihica PV-4 Shew_0436 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 29 54
  Alteromonas macleodii MIT1002 MIT1002_02595 Blue light- and temperature-regulated antirepressor YcgF insig. 28 65
  Pseudomonas sp. S08-1 OH686_19705 hypothetical protein insig. 28 54
  Pseudomonas fluorescens FW300-N2E3 AO353_02445 diguanylate phosphodiesterase insig. 27 54
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3740 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 26 54
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4208 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 26 54
  Rhizobium sp. OAE497 ABIE40_RS29410 EAL domain-containing protein insig. 30 56
  Rahnella sp. WP5 EX31_RS09160 EAL domain-containing protein insig. 33 39
  Vibrio cholerae E7946 ATCC 55056 CSW01_07985 EAL domain-containing protein cofit 28 54
  Pseudomonas fluorescens SBW25 PFLU_RS09975 EAL and GGDEF domain-containing protein insig. 26 54
  Pseudomonas fluorescens SBW25-INTG PFLU_RS09975 EAL and GGDEF domain-containing protein insig. 26 54
  Pseudomonas simiae WCS417 PS417_09320 diguanylate phosphodiesterase insig. 26 54
  Pseudomonas syringae pv. syringae B728a Psyr_1598 diguanylate cyclase/phosphodiesterase insig. 25 54
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1598 diguanylate cyclase/phosphodiesterase insig. 25 54
  Shewanella amazonensis SB2B Sama_2731 putative diguanylate phosphodiesterase (RefSeq) insig. 31 54
  Shewanella oneidensis MR-1 SO0555 conserved hypothetical protein (NCBI ptt file) insig. 27 57
  Shewanella sp. ANA-3 Shewana3_0554 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 27 59
  Pantoea sp. MT58 IAI47_03300 EAL domain-containing protein insig. 34 38
  Magnetospirillum magneticum AMB-1 AMB_RS21020 bifunctional diguanylate cyclase/phosphodiesterase insig. 26 53
  Paraburkholderia sabiae LMG 24235 QEN71_RS15270 EAL domain-containing protein insig. 29 54
  Kangiella aquimarina DSM 16071 B158DRAFT_0054 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 31 38
  Desulfovibrio vulgaris Hildenborough JW710 DVU1959 EAL domain/GGDEF domain protein (TIGR) insig. 27 53
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1099 diguanylate cyclase (GGDEF) domain insig. 34 38
  Desulfovibrio vulgaris Miyazaki F DvMF_0617 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 28 53
  Rhodopseudomonas palustris CGA009 TX73_002030 EAL domain-containing protein insig. 29 39
  Castellaniella sp019104865 MT123 ABCV34_RS00960 EAL domain-containing protein insig. 32 38
  Cupriavidus basilensis FW507-4G11 RR42_RS34815 diguanylate cyclase strong 32 43
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4666 Sensory box/GGDEF family protein insig. 29 54
  Pseudomonas fluorescens FW300-N2C3 AO356_26670 histidine kinase insig. 28 53
  Paraburkholderia sabiae LMG 24235 QEN71_RS18790 GGDEF domain-containing phosphodiesterase insig. 26 57
  Burkholderia phytofirmans PsJN BPHYT_RS03250 diguanylate cyclase insig. 33 37
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04630 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 33 37
  Azospirillum sp. SherDot2 MPMX19_00480 hypothetical protein insig. 30 53
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2728 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 34
  Paraburkholderia graminis OAS925 ABIE53_001451 diguanylate cyclase (GGDEF)-like protein/PAS domain S-box-containing protein insig. 30 37
  Vibrio cholerae E7946 ATCC 55056 CSW01_08600 hypothetical protein insig. 28 53
  Ralstonia sp. UNC404CL21Col ABZR87_RS20425 EAL domain-containing protein insig. 33 37
  Rhizobium sp. OAE497 ABIE40_RS15510 bifunctional diguanylate cyclase/phosphodiesterase insig. 27 53
  Caulobacter crescentus NA1000 CCNA_00089 MHYT/PAS-family GGDEF/EAL protein cofit 34 36
  Caulobacter crescentus NA1000 Δfur CCNA_00089 MHYT/PAS-family GGDEF/EAL protein cofit 34 36
  Pseudomonas putida KT2440 PP_4959 diguanylate cyclase cofit 33 37
  Pseudomonas fluorescens SBW25 PFLU_RS05520 GGDEF and EAL domain-containing protein insig. 33 37
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05520 GGDEF and EAL domain-containing protein insig. 33 37
  Pseudomonas sp. RS175 PFR28_04179 Sensor histidine kinase RcsC sig. 33 36
  Paraburkholderia sabiae LMG 24235 QEN71_RS02090 EAL domain-containing protein insig. 32 37
  Ralstonia solanacearum PSI07 RPSI07_RS03365 GGDEF-domain containing protein insig. 32 37
  Agrobacterium fabrum C58 Atu4490 diguanylate cyclase insig. 28 57
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00324 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 29 37
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15525 GGDEF and EAL domain-containing protein insig. 34 37
  Herbaspirillum seropedicae SmR1 HSERO_RS08500 hypothetical protein insig. 31 38
  Pseudomonas simiae WCS417 PS417_18610 histidine kinase sig. 29 56
  Shewanella sp. ANA-3 Shewana3_0868 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 35 37
  Pseudomonas simiae WCS417 PS417_05435 diguanylate cyclase insig. 28 54