Conservation of cofitness between Xcc-8004.4073.1 and Xcc-8004.2012.1 in Xanthomonas campestris pv. campestris strain 8004

88 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.4073.1 Amidophosphoribosyltransferase (EC 2.4.2.14) 1.0 Xcc-8004.2012.1 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.91 4
Lysobacter sp. OAE881 0.82 ABIE51_RS06180 amidophosphoribosyltransferase 0.72 ABIE51_RS15390 5-(carboxyamino)imidazole ribonucleotide synthase low > 62
Dyella japonica UNC79MFTsu3.2 0.73 ABZR86_RS06775 amidophosphoribosyltransferase 0.60 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase — —
Rhodanobacter sp. FW510-T8 0.71 OKGIIK_05570 purF amidophosphoribosyltransferase 0.63 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase — —
Rhodanobacter denitrificans MT42 0.71 LRK55_RS01105 amidophosphoribosyltransferase 0.63 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase low > 63
Rhodanobacter denitrificans FW104-10B01 0.71 LRK54_RS01340 amidophosphoribosyltransferase 0.62 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas sp. S08-1 0.65 OH686_04420 amidophosphoribosyltransferase 0.49 OH686_13380 N5-carboxyaminoimidazole ribonucleotide synthase — —
Pseudomonas putida KT2440 0.64 PP_2000 amidophosphoribosyl transferase 0.46 PP_5335 N5-carboxyaminoimidazole ribonucleotide synthase — —
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.44 PfGW456L13_747 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Pseudomonas sp. RS175 0.64 PFR28_02811 Amidophosphoribosyltransferase 0.47 PFR28_04495 N5-carboxyaminoimidazole ribonucleotide synthase — —
Pseudomonas fluorescens SBW25 0.64 PFLU_RS20515 amidophosphoribosyltransferase 0.44 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas simiae WCS417 0.64 PS417_18535 amidophosphoribosyltransferase 0.44 PS417_28115 phosphoribosylaminoimidazole carboxylase — —
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS20515 amidophosphoribosyltransferase 0.44 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas stutzeri RCH2 0.64 Psest_2579 amidophosphoribosyltransferase 0.46 Psest_4068 phosphoribosylaminoimidazole carboxylase, PurK protein — —
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_20690 amidophosphoribosyltransferase 0.43 AO353_09935 phosphoribosylaminoimidazole carboxylase — —
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.46 Pf6N2E2_4081 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_21465 amidophosphoribosyltransferase 0.44 AO356_11075 phosphoribosylaminoimidazole carboxylase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_1668 amidophosphoribosyltransferase 0.43 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_1668 amidophosphoribosyltransferase 0.43 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase — —
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_1488 amidophosphoribosyltransferase (EC 2.4.2.14) 0.31 B158DRAFT_0610 5-(carboxyamino)imidazole ribonucleotide synthase — —
Shewanella loihica PV-4 0.62 Shew_2302 amidophosphoribosyltransferase (RefSeq) 0.31 Shew_1249 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) low > 60
Marinobacter adhaerens HP15 0.62 HP15_1821 amidophosphoribosyltransferase 0.43 HP15_2350 phosphoribosylaminoimidazole carboxylase ATPase subunit — —
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_05115 amidophosphoribosyltransferase 0.35 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase 0.33 53
Shewanella amazonensis SB2B 0.61 Sama_2146 amidophosphoribosyltransferase (RefSeq) 0.24 Sama_1063 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.94 5
Erwinia tracheiphila SCR3 0.61 LU632_RS07865 purF amidophosphoribosyltransferase 0.25 LU632_RS15250 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.90 10
Shewanella sp. ANA-3 0.61 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) 0.24 Shewana3_3156 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.94 6
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.27 GFF4438 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_01393 Amidophosphoribosyltransferase 0.26 OHPLBJKB_03159 N5-carboxyaminoimidazole ribonucleotide synthase 0.47 48
Pantoea sp. MT58 0.61 IAI47_06275 amidophosphoribosyltransferase 0.25 IAI47_14355 5-(carboxyamino)imidazole ribonucleotide synthase 0.97 8
Serratia liquefaciens MT49 0.61 IAI46_17810 amidophosphoribosyltransferase 0.27 IAI46_05370 5-(carboxyamino)imidazole ribonucleotide synthase low > 86
Escherichia coli ECRC62 0.61 BNILDI_13255 purF amidophosphoribosyltransferase 0.27 BNILDI_22260 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.94 14
Escherichia fergusonii Becca 0.61 EFB2_01546 Amidophosphoribosyltransferase 0.26 EFB2_03540 N5-carboxyaminoimidazole ribonucleotide synthase low > 86
Escherichia coli ECRC99 0.61 KEDOAH_05480 purF amidophosphoribosyltransferase 0.26 KEDOAH_20130 purK 5-(carboxyamino)imidazole ribonucleotide synthase — —
Escherichia coli ECOR38 0.61 HEPCGN_21910 purF amidophosphoribosyltransferase 0.27 HEPCGN_06480 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.95 11
Escherichia coli ECRC101 0.61 MCAODC_13755 purF amidophosphoribosyltransferase 0.26 MCAODC_27060 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.95 4
Escherichia coli Nissle 1917 0.61 ECOLIN_RS13405 amidophosphoribosyltransferase 0.27 ECOLIN_RS03025 5-(carboxyamino)imidazole ribonucleotide synthase — —
Escherichia coli ECRC98 0.61 JDDGAC_26675 purF amidophosphoribosyltransferase 0.26 JDDGAC_11490 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 86
Escherichia coli ECRC100 0.61 OKFHMN_22715 purF amidophosphoribosyltransferase 0.26 OKFHMN_07840 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.94 7
Escherichia coli ECRC102 0.61 NIAGMN_20485 purF amidophosphoribosyltransferase 0.26 NIAGMN_05895 purK 5-(carboxyamino)imidazole ribonucleotide synthase — —
Escherichia coli BW25113 0.60 b2312 purF amidophosphoribosyltransferase (NCBI) 0.26 b0522 purK phosphoribosylaminoimidazole carboxylase (NCBI) 0.95 5
Klebsiella michiganensis M5al 0.60 BWI76_RS20350 amidophosphoribosyltransferase 0.27 BWI76_RS07065 5-(carboxyamino)imidazole ribonucleotide synthase 0.89 5
Escherichia coli BL21 0.60 ECD_02237 amidophosphoribosyltransferase 0.27 ECD_00472 N5-carboxyaminoimidazole ribonucleotide synthase 0.82 9
Escherichia coli ECOR27 0.60 NOLOHH_14335 purF amidophosphoribosyltransferase 0.26 NOLOHH_00830 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.88 18
Enterobacter sp. TBS_079 0.60 MPMX20_03247 Amidophosphoribosyltransferase 0.26 MPMX20_01097 N5-carboxyaminoimidazole ribonucleotide synthase 0.95 6
Shewanella oneidensis MR-1 0.60 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) 0.25 SO3555 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) 0.95 4
Acinetobacter radioresistens SK82 0.60 MPMX26_01122 Amidophosphoribosyltransferase 0.42 MPMX26_03050 N5-carboxyaminoimidazole ribonucleotide synthase 0.89 9
Rahnella sp. WP5 0.60 EX31_RS19570 amidophosphoribosyltransferase 0.27 EX31_RS22620 5-(carboxyamino)imidazole ribonucleotide synthase 0.96 5
Dickeya dadantii 3937 0.60 DDA3937_RS14435 amidophosphoribosyltransferase 0.26 DDA3937_RS15110 5-(carboxyamino)imidazole ribonucleotide synthase 0.82 11
Enterobacter asburiae PDN3 0.60 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) 0.27 EX28DRAFT_2460 phosphoribosylaminoimidazole carboxylase, PurK protein — —
Pectobacterium carotovorum WPP14 0.60 HER17_RS07020 amidophosphoribosyltransferase 0.23 HER17_RS06470 5-(carboxyamino)imidazole ribonucleotide synthase 0.92 45
Dickeya dianthicola ME23 0.60 DZA65_RS15335 amidophosphoribosyltransferase 0.25 DZA65_RS15995 5-(carboxyamino)imidazole ribonucleotide synthase 0.89 6
Dickeya dianthicola 67-19 0.60 HGI48_RS14405 amidophosphoribosyltransferase 0.25 HGI48_RS15190 5-(carboxyamino)imidazole ribonucleotide synthase 0.77 12
Alteromonas macleodii MIT1002 0.59 MIT1002_02524 Amidophosphoribosyltransferase 0.34 MIT1002_00522 N5-carboxyaminoimidazole ribonucleotide synthase 0.98 13
Dechlorosoma suillum PS 0.58 Dsui_3186 amidophosphoribosyltransferase 0.30 Dsui_0091 phosphoribosylaminoimidazole carboxylase, PurK protein — —
Paraburkholderia graminis OAS925 0.58 ABIE53_004816 amidophosphoribosyltransferase 0.30 ABIE53_003423 5-(carboxyamino)imidazole ribonucleotide synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_06060 amidophosphoribosyltransferase 0.31 H281DRAFT_04185 5-(carboxyamino)imidazole ribonucleotide synthase — —
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS33840 amidophosphoribosyltransferase 0.30 BPHYT_RS16245 phosphoribosylaminoimidazole carboxylase 0.86 12
Ralstonia solanacearum GMI1000 0.57 RS_RS09930 amidophosphoribosyltransferase 0.26 RS_RS02885 5-(carboxyamino)imidazole ribonucleotide synthase — —
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS02550 amidophosphoribosyltransferase 0.25 RALBFv3_RS12200 5-(carboxyamino)imidazole ribonucleotide synthase — —
Ralstonia solanacearum UW163 0.57 UW163_RS11175 amidophosphoribosyltransferase 0.25 UW163_RS01410 5-(carboxyamino)imidazole ribonucleotide synthase — —
Ralstonia solanacearum PSI07 0.57 RPSI07_RS14765 amidophosphoribosyltransferase 0.25 RPSI07_RS21130 5-(carboxyamino)imidazole ribonucleotide synthase — —
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS14465 amidophosphoribosyltransferase 0.26 ABZR87_RS08090 5-(carboxyamino)imidazole ribonucleotide synthase — —
Castellaniella sp019104865 MT123 0.56 ABCV34_RS04130 amidophosphoribosyltransferase 0.31 ABCV34_RS00565 5-(carboxyamino)imidazole ribonucleotide synthase — —
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS14325 amidophosphoribosyltransferase 0.28 RR42_RS03230 phosphoribosylaminoimidazole carboxylase — —
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS17680 amidophosphoribosyltransferase 0.31 QEN71_RS02450 5-(carboxyamino)imidazole ribonucleotide synthase 0.63 97
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF300 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.31 GFF2770 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS16445 amidophosphoribosyltransferase 0.32 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase — —
Acidovorax sp. GW101-3H11 0.54 Ac3H11_2608 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.27 Ac3H11_675 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Variovorax sp. OAS795 0.52 ABID97_RS21635 amidophosphoribosyltransferase 0.30 ABID97_RS01700 5-(carboxyamino)imidazole ribonucleotide synthase — —
Variovorax sp. SCN45 0.52 GFF3089 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.32 GFF5513 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18) 0.90 1
Synechococcus elongatus PCC 7942 0.32 Synpcc7942_0004 purF amidophosphoribosyltransferase 0.28 Synpcc7942_1428 purK phosphoribosylaminoimidazole carboxylase ATPase subunit — —
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_01730 amidophosphoribosyltransferase 0.40 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit low > 67
Caulobacter crescentus NA1000 0.31 CCNA_01730 amidophosphoribosyltransferase 0.40 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.86 8
Rhodospirillum rubrum S1H 0.30 Rru_A0404 Amidophosphoribosyl transferase (NCBI) 0.34 Rru_A1051 Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) low > 58
Mycobacterium tuberculosis H37Rv 0.30 Rv0808 Amidophosphoribosyltransferase PurF (glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (gpatase) 0.28 Rv3276c Probable phosphoribosylaminoimidazole carboxylase ATPase subunit PurK (air carboxylase) (AIRC) — —
Bosea sp. OAE506 0.30 ABIE41_RS17810 amidophosphoribosyltransferase 0.38 ABIE41_RS09245 5-(carboxyamino)imidazole ribonucleotide synthase low > 77
Bifidobacterium breve UCC2003 0.30 BBR_RS13380 amidophosphoribosyltransferase 0.27 BBR_RS13300 5-(carboxyamino)imidazole ribonucleotide synthase low > 34
Azospirillum sp. SherDot2 0.30 MPMX19_00906 Amidophosphoribosyltransferase 0.33 MPMX19_01418 N5-carboxyaminoimidazole ribonucleotide synthase — —
Dinoroseobacter shibae DFL-12 0.29 Dshi_2132 amidophosphoribosyltransferase (RefSeq) 0.35 Dshi_0680 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) 0.90 6
Azospirillum brasilense Sp245 0.29 AZOBR_RS08310 amidophosphoribosyltransferase 0.36 AZOBR_RS06140 phosphoribosylaminoimidazole carboxylase — —
Rhodopseudomonas palustris CGA009 0.29 TX73_015990 amidophosphoribosyltransferase 0.38 TX73_021645 5-(carboxyamino)imidazole ribonucleotide synthase — —
Phaeobacter inhibens DSM 17395 0.29 PGA1_c10810 amidophosphoribosyltransferase PurF 0.34 PGA1_c24870 phosphoribosylaminoimidazole carboxylase ATPase subunit PurK 0.93 5
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS03735 amidophosphoribosyltransferase 0.34 A4249_RS08935 5-(carboxyamino)imidazole ribonucleotide synthase — —
Rhizobium sp. OAE497 0.28 ABIE40_RS06270 amidophosphoribosyltransferase 0.36 ABIE40_RS16070 5-(carboxyamino)imidazole ribonucleotide synthase 0.85 61
Agrobacterium fabrum C58 0.28 Atu1075 amidophosphoribosyltransferase 0.36 Atu3755 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.94 5
Magnetospirillum magneticum AMB-1 0.28 AMB_RS10545 amidophosphoribosyltransferase 0.31 AMB_RS11140 5-(carboxyamino)imidazole ribonucleotide synthase — —
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_3626 amidophosphoribosyltransferase (EC 2.4.2.14) 0.36 Ga0059261_1428 5-(carboxyamino)imidazole ribonucleotide synthase — —
Sinorhizobium meliloti 1021 0.27 SMc00554 amidophosphoribosyltransferase 0.36 SMc04002 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.97 6
Echinicola vietnamensis KMM 6221, DSM 17526 0.11 Echvi_4653 Glutamine phosphoribosylpyrophosphate amidotransferase 0.27 Echvi_0884 phosphoribosylaminoimidazole carboxylase, PurK protein — —

Not shown: 10 genomes with orthologs for Xcc-8004.4073.1 only; 4 genomes with orthologs for Xcc-8004.2012.1 only