Conservation of cofitness between Xcc-8004.2012.1 and Xcc-8004.2011.1 in Xanthomonas campestris pv. campestris strain 8004

89 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.2012.1 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 1.0 Xcc-8004.2011.1 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) 0.83 8
Lysobacter sp. OAE881 0.72 ABIE51_RS15390 5-(carboxyamino)imidazole ribonucleotide synthase 0.64 ABIE51_RS15395 5-(carboxyamino)imidazole ribonucleotide mutase
Rhodanobacter sp. FW510-T8 0.63 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.59 OKGIIK_03045 purE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Rhodanobacter denitrificans MT42 0.63 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase 0.66 LRK55_RS13525 5-(carboxyamino)imidazole ribonucleotide mutase
Rhodanobacter denitrificans FW104-10B01 0.62 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase 0.66 LRK54_RS13810 5-(carboxyamino)imidazole ribonucleotide mutase
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase 0.64 ABZR86_RS09835 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas sp. S08-1 0.49 OH686_13380 N5-carboxyaminoimidazole ribonucleotide synthase 0.65 OH686_13375 N5-carboxyaminoimidazole ribonucleotide mutase
Pseudomonas sp. RS175 0.47 PFR28_04495 N5-carboxyaminoimidazole ribonucleotide synthase 0.67 PFR28_04496 N5-carboxyaminoimidazole ribonucleotide mutase
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_4081 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.58 Pf6N2E2_4082 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Pseudomonas stutzeri RCH2 0.46 Psest_4068 phosphoribosylaminoimidazole carboxylase, PurK protein 0.66 Psest_4069 phosphoribosylaminoimidazole carboxylase, PurE protein
Pseudomonas putida KT2440 0.46 PP_5335 N5-carboxyaminoimidazole ribonucleotide synthase 0.67 PP_5336 N5-carboxyaminoimidazole ribonucleotide mutase
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_11075 phosphoribosylaminoimidazole carboxylase 0.67 AO356_11080 N5-carboxyaminoimidazole ribonucleotide mutase
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_747 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.67 PfGW456L13_746 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Pseudomonas simiae WCS417 0.44 PS417_28115 phosphoribosylaminoimidazole carboxylase 0.67 PS417_28120 N5-carboxyaminoimidazole ribonucleotide mutase
Pseudomonas fluorescens SBW25 0.44 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase 0.67 PFLU_RS29805 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase 0.67 PFLU_RS29805 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_09935 phosphoribosylaminoimidazole carboxylase 0.67 AO353_09940 N5-carboxyaminoimidazole ribonucleotide mutase
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_2028 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.67 Pf1N1B4_2027 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase 0.66 Psyr_5048 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase 0.66 Psyr_5048 5-(carboxyamino)imidazole ribonucleotide mutase
Marinobacter adhaerens HP15 0.43 HP15_2350 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.66 HP15_2349 phosphoribosylaminoimidazole carboxylase catalytic subunit
Acinetobacter radioresistens SK82 0.42 MPMX26_03050 N5-carboxyaminoimidazole ribonucleotide synthase 0.56 MPMX26_03051 N5-carboxyaminoimidazole ribonucleotide mutase 0.89 7
Caulobacter crescentus NA1000 0.40 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.56 CCNA_03393 phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit 0.97 1
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.56 CCNA_03393 phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit low > 67
Bosea sp. OAE506 0.38 ABIE41_RS09245 5-(carboxyamino)imidazole ribonucleotide synthase 0.46 ABIE41_RS09240 5-(carboxyamino)imidazole ribonucleotide mutase
Rhodopseudomonas palustris CGA009 0.38 TX73_021645 5-(carboxyamino)imidazole ribonucleotide synthase 0.48 TX73_021640 5-(carboxyamino)imidazole ribonucleotide mutase
Azospirillum brasilense Sp245 0.36 AZOBR_RS06140 phosphoribosylaminoimidazole carboxylase 0.59 AZOBR_RS06145 N5-carboxyaminoimidazole ribonucleotide mutase
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_1428 5-(carboxyamino)imidazole ribonucleotide synthase 0.55 Ga0059261_1427 phosphoribosylaminoimidazole carboxylase, PurE protein
Sinorhizobium meliloti 1021 0.36 SMc04002 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.48 SMc04001 phosphoribosylaminoimidazole carboxylase catalytic subunit protein 0.90 35
Rhizobium sp. OAE497 0.36 ABIE40_RS16070 5-(carboxyamino)imidazole ribonucleotide synthase 0.48 ABIE40_RS16065 5-(carboxyamino)imidazole ribonucleotide mutase
Agrobacterium fabrum C58 0.36 Atu3755 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.48 Atu3754 phosphoribosylaminoimidazole carboxylase catalytic subunit 0.94 4
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 CSW01_00265 5-(carboxyamino)imidazole ribonucleotide mutase 0.56 28
Dinoroseobacter shibae DFL-12 0.35 Dshi_0680 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) 0.41 Dshi_0681 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq)
Brevundimonas sp. GW460-12-10-14-LB2 0.34 A4249_RS08935 5-(carboxyamino)imidazole ribonucleotide synthase 0.55 A4249_RS08940 5-(carboxyamino)imidazole ribonucleotide mutase
Alteromonas macleodii MIT1002 0.34 MIT1002_00522 N5-carboxyaminoimidazole ribonucleotide synthase 0.46 MIT1002_00521 N5-carboxyaminoimidazole ribonucleotide mutase 0.82 61
Phaeobacter inhibens DSM 17395 0.34 PGA1_c24870 phosphoribosylaminoimidazole carboxylase ATPase subunit PurK 0.50 PGA1_c24860 phosphoribosylaminoimidazole carboxylase catalytic subunit PurE 0.87 17
Rhodospirillum rubrum S1H 0.34 Rru_A1051 Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) 0.53 Rru_A1050 Phosphoribosylaminoimidazole carboxylase (NCBI)
Azospirillum sp. SherDot2 0.33 MPMX19_01418 N5-carboxyaminoimidazole ribonucleotide synthase 0.58 MPMX19_01417 N5-carboxyaminoimidazole ribonucleotide mutase
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase 0.48 HSERO_RS03365 N5-carboxyaminoimidazole ribonucleotide mutase
Magnetospirillum magneticum AMB-1 0.31 AMB_RS11140 5-(carboxyamino)imidazole ribonucleotide synthase 0.57 AMB_RS11145 5-(carboxyamino)imidazole ribonucleotide mutase
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_0610 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 B158DRAFT_0611 5-(carboxyamino)imidazole ribonucleotide mutase
Paraburkholderia sabiae LMG 24235 0.31 QEN71_RS02450 5-(carboxyamino)imidazole ribonucleotide synthase 0.50 QEN71_RS02445 5-(carboxyamino)imidazole ribonucleotide mutase
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_04185 5-(carboxyamino)imidazole ribonucleotide synthase 0.48 H281DRAFT_04186 5-(carboxyamino)imidazole ribonucleotide mutase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF2770 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.44 GFF2771 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Castellaniella sp019104865 MT123 0.31 ABCV34_RS00565 5-(carboxyamino)imidazole ribonucleotide synthase 0.43 ABCV34_RS00560 5-(carboxyamino)imidazole ribonucleotide mutase
Shewanella loihica PV-4 0.31 Shew_1249 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) 0.51 Shew_1248 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq)
Paraburkholderia graminis OAS925 0.30 ABIE53_003423 5-(carboxyamino)imidazole ribonucleotide synthase 0.48 ABIE53_003424 5-(carboxyamino)imidazole ribonucleotide mutase
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS16245 phosphoribosylaminoimidazole carboxylase 0.48 BPHYT_RS16250 N5-carboxyaminoimidazole ribonucleotide mutase low > 109
Dechlorosoma suillum PS 0.30 Dsui_0091 phosphoribosylaminoimidazole carboxylase, PurK protein 0.50 Dsui_0092 phosphoribosylaminoimidazole carboxylase, PurE protein
Variovorax sp. OAS795 0.30 ABID97_RS01700 5-(carboxyamino)imidazole ribonucleotide synthase 0.44 ABID97_RS01705 5-(carboxyamino)imidazole ribonucleotide mutase
Mycobacterium tuberculosis H37Rv 0.28 Rv3276c Probable phosphoribosylaminoimidazole carboxylase ATPase subunit PurK (air carboxylase) (AIRC) 0.50 Rv3275c Probable phosphoribosylaminoimidazole carboxylase catalytic subunit PurE (air carboxylase) (AIRC)
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS03230 phosphoribosylaminoimidazole carboxylase 0.45 RR42_RS03225 N5-carboxyaminoimidazole ribonucleotide mutase
Echinicola vietnamensis KMM 6221, DSM 17526 0.27 Echvi_0884 phosphoribosylaminoimidazole carboxylase, PurK protein 0.47 Echvi_0885 phosphoribosylaminoimidazole carboxylase, PurE protein
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.27 GFF4438 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.53 GFF4439 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) low > 78
Rahnella sp. WP5 0.27 EX31_RS22620 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 EX31_RS22625 5-(carboxyamino)imidazole ribonucleotide mutase 0.90 44
Enterobacter asburiae PDN3 0.27 EX28DRAFT_2460 phosphoribosylaminoimidazole carboxylase, PurK protein 0.53 EX28DRAFT_2459 phosphoribosylaminoimidazole carboxylase, PurE protein
Serratia liquefaciens MT49 0.27 IAI46_05370 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 IAI46_05375 5-(carboxyamino)imidazole ribonucleotide mutase low > 86
Klebsiella michiganensis M5al 0.27 BWI76_RS07065 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 BWI76_RS07070 5-(carboxyamino)imidazole ribonucleotide mutase 0.87 5
Bifidobacterium breve UCC2003 0.27 BBR_RS13300 5-(carboxyamino)imidazole ribonucleotide synthase 0.55 BBR_RS13295 5-(carboxyamino)imidazole ribonucleotide mutase
Escherichia coli ECRC62 0.27 BNILDI_22260 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 BNILDI_22255 purE N5-carboxyaminoimidazole ribonucleotide mutase 0.91 21
Pedobacter sp. GW460-11-11-14-LB5 0.27 CA265_RS07745 5-(carboxyamino)imidazole ribonucleotide synthase 0.45 CA265_RS07740 5-(carboxyamino)imidazole ribonucleotide mutase
Escherichia coli ECOR38 0.27 HEPCGN_06480 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 HEPCGN_06475 purE N5-carboxyaminoimidazole ribonucleotide mutase 0.91 14
Escherichia coli BL21 0.27 ECD_00472 N5-carboxyaminoimidazole ribonucleotide synthase 0.53 ECD_00473 N5-carboxyaminoimidazole ribonucleotide mutase 0.91 3
Escherichia coli Nissle 1917 0.27 ECOLIN_RS03025 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 ECOLIN_RS03030 5-(carboxyamino)imidazole ribonucleotide mutase
Escherichia coli BW25113 0.26 b0522 purK phosphoribosylaminoimidazole carboxylase (NCBI) 0.53 b0523 purE phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) 0.92 6
Escherichia fergusonii Becca 0.26 EFB2_03540 N5-carboxyaminoimidazole ribonucleotide synthase 0.53 EFB2_03539 N5-carboxyaminoimidazole ribonucleotide mutase low > 86
Escherichia coli ECOR27 0.26 NOLOHH_00830 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 NOLOHH_00825 purE N5-carboxyaminoimidazole ribonucleotide mutase 0.91 9
Escherichia coli ECRC99 0.26 KEDOAH_20130 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 KEDOAH_20135 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECRC100 0.26 OKFHMN_07840 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 OKFHMN_07835 purE N5-carboxyaminoimidazole ribonucleotide mutase 0.81 48
Escherichia coli ECRC101 0.26 MCAODC_27060 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 MCAODC_27055 purE N5-carboxyaminoimidazole ribonucleotide mutase 0.97 1
Escherichia coli ECRC98 0.26 JDDGAC_11490 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 JDDGAC_11485 purE N5-carboxyaminoimidazole ribonucleotide mutase low > 86
Escherichia coli ECRC102 0.26 NIAGMN_05895 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 NIAGMN_05890 purE N5-carboxyaminoimidazole ribonucleotide mutase
Enterobacter sp. TBS_079 0.26 MPMX20_01097 N5-carboxyaminoimidazole ribonucleotide synthase 0.53 MPMX20_01098 N5-carboxyaminoimidazole ribonucleotide mutase 0.94 6
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_03159 N5-carboxyaminoimidazole ribonucleotide synthase 0.53 OHPLBJKB_03158 N5-carboxyaminoimidazole ribonucleotide mutase low > 73
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_12600 5-(carboxyamino)imidazole ribonucleotide synthase 0.50 CA264_12595 5-(carboxyamino)imidazole ribonucleotide mutase 0.67 1
Ralstonia solanacearum GMI1000 0.26 RS_RS02885 5-(carboxyamino)imidazole ribonucleotide synthase 0.51 RS_RS02880 5-(carboxyamino)imidazole ribonucleotide mutase
Dickeya dadantii 3937 0.26 DDA3937_RS15110 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 DDA3937_RS15105 5-(carboxyamino)imidazole ribonucleotide mutase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS09290 5-(carboxyamino)imidazole ribonucleotide synthase 0.49 ABZR88_RS09285 5-(carboxyamino)imidazole ribonucleotide mutase
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS08090 5-(carboxyamino)imidazole ribonucleotide synthase 0.47 ABZR87_RS08085 5-(carboxyamino)imidazole ribonucleotide mutase
Ralstonia solanacearum UW163 0.25 UW163_RS01410 5-(carboxyamino)imidazole ribonucleotide synthase 0.51 UW163_RS01415 5-(carboxyamino)imidazole ribonucleotide mutase
Pantoea sp. MT58 0.25 IAI47_14355 5-(carboxyamino)imidazole ribonucleotide synthase 0.52 IAI47_14350 5-(carboxyamino)imidazole ribonucleotide mutase 0.95 11
Ralstonia solanacearum IBSBF1503 0.25 RALBFv3_RS12200 5-(carboxyamino)imidazole ribonucleotide synthase 0.51 RALBFv3_RS12195 5-(carboxyamino)imidazole ribonucleotide mutase
Ralstonia solanacearum PSI07 0.25 RPSI07_RS21130 5-(carboxyamino)imidazole ribonucleotide synthase 0.51 RPSI07_RS21135 5-(carboxyamino)imidazole ribonucleotide mutase
Dickeya dianthicola 67-19 0.25 HGI48_RS15190 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 HGI48_RS15185 5-(carboxyamino)imidazole ribonucleotide mutase low > 71
Shewanella oneidensis MR-1 0.25 SO3555 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) 0.52 SO3554 purE phosphoribosylaminoimidazole carboxylase, catalytic subunit (NCBI ptt file) 0.97 5
Dickeya dianthicola ME23 0.25 DZA65_RS15995 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 DZA65_RS15990 5-(carboxyamino)imidazole ribonucleotide mutase 0.79 8
Erwinia tracheiphila SCR3 0.25 LU632_RS15250 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 LU632_RS15245 purE 5-(carboxyamino)imidazole ribonucleotide mutase 0.87 4
Shewanella sp. ANA-3 0.24 Shewana3_3156 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.53 Shewana3_3155 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq) 0.93 6
Shewanella amazonensis SB2B 0.24 Sama_1063 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.59 Sama_1064 phosphoribosylaminoimidazole carboxylase (RefSeq) 0.93 12
Pectobacterium carotovorum WPP14 0.23 HER17_RS06470 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 HER17_RS06475 5-(carboxyamino)imidazole ribonucleotide mutase 0.97 5

Not shown: 3 genomes with orthologs for Xcc-8004.2012.1 only; 10 genomes with orthologs for Xcc-8004.2011.1 only