Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Xanthomonas campestris pv. campestris strain 8004 | 1.0 | Xcc-8004.1205.1 | | hypothetical protein | 1.0 | Xcc-8004.1059.1 | | Acetolactate synthase large subunit (EC 2.2.1.6) | 0.77 | 11 |
Lysobacter sp. OAE881 | 0.82 | ABIE51_RS17260 | | RidA family protein | 0.69 | ABIE51_RS17550 | | acetolactate synthase 2 catalytic subunit | 0.88 | 36 |
Dyella japonica UNC79MFTsu3.2 | 0.79 | ABZR86_RS11845 | | RidA family protein | 0.36 | ABZR86_RS15935 | | biosynthetic-type acetolactate synthase large subunit | 0.77 | 38 |
Rhodanobacter denitrificans MT42 | 0.79 | LRK55_RS11525 | | RidA family protein | 0.33 | LRK55_RS09950 | | biosynthetic-type acetolactate synthase large subunit | low | > 63 |
Rhodanobacter denitrificans FW104-10B01 | 0.79 | LRK54_RS11800 | | RidA family protein | 0.33 | LRK54_RS10310 | | biosynthetic-type acetolactate synthase large subunit | 0.70 | 8 |
Rhodanobacter sp. FW510-T8 | 0.79 | OKGIIK_12095 | ridA | reactive intermediate/imine deaminase | 0.32 | OKGIIK_13610 | ilvB | biosynthetic-type acetolactate synthase large subunit | low | > 52 |
Pseudomonas stutzeri RCH2 | 0.64 | Psest_3818 | | endoribonuclease L-PSP, putative | 0.37 | Psest_1036 | | acetolactate synthase, large subunit, biosynthetic type | — | — |
Marinobacter adhaerens HP15 | 0.62 | HP15_306 | | YjgF-like protein | 0.52 | HP15_1017 | | acetolactate synthase, large subunit, biosynthetic type | low | > 73 |
Pseudomonas syringae pv. syringae B728a | 0.62 | Psyr_0208 | | endoribonuclease L-PSP | 0.37 | Psyr_0846 | | acetolactate synthase, large subunit | 0.67 | 22 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.62 | Psyr_0208 | | endoribonuclease L-PSP | 0.37 | Psyr_0846 | | acetolactate synthase, large subunit | low | > 86 |
Pseudomonas putida KT2440 | 0.61 | PP_5303 | | aminoacrylate/iminopropionate hydrolase/deaminase | 0.36 | PP_4680 | | acetohydroxybutanoate synthase / acetolactate synthase | 0.64 | 12 |
Pseudomonas fluorescens SBW25-INTG | 0.61 | PFLU_RS29515 | | RidA family protein | 0.36 | PFLU_RS25650 | | acetolactate synthase 3 large subunit | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.61 | Pf6N2E2_4360 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.35 | Pf6N2E2_5175 | | Acetolactate synthase large subunit (EC 2.2.1.6) | low | > 103 |
Pseudomonas sp. RS175 | 0.61 | PFR28_04425 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.35 | PFR28_03699 | | Acetolactate synthase isozyme 3 large subunit | low | > 88 |
Dechlorosoma suillum PS | 0.61 | Dsui_0312 | | endoribonuclease L-PSP, putative | 0.43 | Dsui_1925 | | acetolactate synthase, large subunit, biosynthetic type | — | — |
Pseudomonas simiae WCS417 | 0.61 | PS417_27835 | | endoribonuclease | 0.35 | PS417_23810 | | acetolactate synthase 3 catalytic subunit | 0.67 | 26 |
Pseudomonas fluorescens SBW25 | 0.61 | PFLU_RS29515 | | RidA family protein | 0.36 | PFLU_RS25650 | | acetolactate synthase 3 large subunit | — | — |
Pseudomonas fluorescens FW300-N1B4 | 0.60 | Pf1N1B4_2112 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.36 | Pf1N1B4_2878 | | Acetolactate synthase large subunit (EC 2.2.1.6) | 0.73 | 27 |
Pseudomonas fluorescens FW300-N2C3 | 0.60 | AO356_12475 | | reactive intermediate/imine deaminase | 0.36 | AO356_16170 | | acetolactate synthase 3 catalytic subunit | 0.34 | 68 |
Pseudomonas fluorescens GW456-L13 | 0.60 | PfGW456L13_779 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.36 | PfGW456L13_1538 | | Acetolactate synthase large subunit (EC 2.2.1.6) | 0.68 | 18 |
Pseudomonas fluorescens FW300-N2E3 | 0.60 | AO353_09285 | | reactive intermediate/imine deaminase | 0.36 | AO353_14495 | | acetolactate synthase 3 catalytic subunit | 0.53 | 45 |
Alteromonas macleodii MIT1002 | 0.58 | MIT1002_00109 | | Putative reactive intermediate deaminase TdcF | 0.37 | MIT1002_00503 | | Acetolactate synthase isozyme 3 large subunit | low | > 70 |
Castellaniella sp019104865 MT123 | 0.57 | ABCV34_RS03565 | | Rid family detoxifying hydrolase | 0.41 | ABCV34_RS12235 | | biosynthetic-type acetolactate synthase large subunit | — | — |
Shewanella amazonensis SB2B | 0.57 | Sama_0263 | | YjgF-like protein (RefSeq) | 0.54 | Sama_3281 | | acetolactate synthase 2 catalytic subunit (RefSeq) | 0.70 | 11 |
Acinetobacter radioresistens SK82 | 0.57 | MPMX26_02797 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.37 | MPMX26_00472 | | Acetolactate synthase isozyme 3 large subunit | 0.80 | 11 |
Pseudomonas sp. S08-1 | 0.57 | OH686_13545 | | RidA/YER057c/UK114 superfamily protein | 0.37 | OH686_08130 | | acetolactate synthase, large subunit, biosynthetic type | low | > 80 |
Shewanella loihica PV-4 | 0.56 | Shew_3500 | | putative endoribonuclease L-PSP (RefSeq) | 0.53 | Shew_0289 | | acetolactate synthase 2 catalytic subunit (RefSeq) | low | > 60 |
Azospirillum brasilense Sp245 | 0.56 | AZOBR_RS32435 | | dfrA | 0.42 | AZOBR_RS06560 | | acetolactate synthase | low | > 97 |
Shewanella oneidensis MR-1 | 0.56 | SO0358 | | endoribonuclease L-PSP, putative (NCBI ptt file) | 0.54 | SO4347 | ilvG | acetolactate synthase II, large subunit (NCBI ptt file) | low | > 76 |
Shewanella sp. ANA-3 | 0.56 | Shewana3_3813 | | putative endoribonuclease L-PSP (RefSeq) | 0.54 | Shewana3_0356 | | acetolactate synthase 2 catalytic subunit (RefSeq) | low | > 73 |
Desulfovibrio vulgaris Hildenborough JW710 | 0.53 | DVU2647 | | endoribonuclease, L-PSP family (TIGR) | 0.42 | DVU1376 | ilvB-2 | acetolactate synthase, large subunit, biosynthetic type (TIGR) | low | > 55 |
Vibrio cholerae E7946 ATCC 55056 | 0.52 | CSW01_12735 | | RidA family protein | 0.51 | CSW01_00155 | | acetolactate synthase 2 catalytic subunit | low | > 62 |
Dickeya dadantii 3937 | 0.51 | DDA3937_RS01915 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.58 | DDA3937_RS20170 | | acetolactate synthase 2 catalytic subunit | low | > 74 |
Phocaeicola vulgatus CL09T03C04 | 0.51 | HMPREF1058_RS18400 | | RidA family protein | 0.42 | HMPREF1058_RS16820 | | biosynthetic-type acetolactate synthase large subunit | 0.53 | 42 |
Phocaeicola dorei CL03T12C01 | 0.51 | ABI39_RS14715 | | RidA family protein | 0.42 | ABI39_RS12720 | | biosynthetic-type acetolactate synthase large subunit | low | > 72 |
Dickeya dianthicola 67-19 | 0.51 | HGI48_RS01890 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.57 | HGI48_RS20310 | | acetolactate synthase 2 catalytic subunit | — | — |
Dickeya dianthicola ME23 | 0.51 | DZA65_RS01960 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.57 | DZA65_RS21350 | | acetolactate synthase 2 catalytic subunit | low | > 75 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.50 | OHPLBJKB_03791 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.56 | OHPLBJKB_04285 | | Acetolactate synthase isozyme 2 large subunit | low | > 73 |
Escherichia fergusonii Becca | 0.50 | EFB2_04290 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.56 | EFB2_04868 | | Acetolactate synthase isozyme 2 large subunit | low | > 86 |
Escherichia coli ECRC101 | 0.50 | MCAODC_02380 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.56 | MCAODC_05160 | ilvG | acetolactate synthase 2 catalytic subunit | low | > 87 |
Escherichia coli ECOR38 | 0.50 | HEPCGN_10070 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.56 | HEPCGN_13365 | ilvG | acetolactate synthase 2 catalytic subunit | low | > 87 |
Escherichia coli ECRC99 | 0.50 | KEDOAH_16280 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.56 | KEDOAH_13495 | ilvG | acetolactate synthase 2 catalytic subunit | — | — |
Escherichia coli Nissle 1917 | 0.50 | ECOLIN_RS24615 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.56 | ECOLIN_RS21650 | | acetolactate synthase 2 catalytic subunit | low | > 55 |
Escherichia coli BW25113 | 0.50 | b4243 | yjgF | orf, hypothetical protein (VIMSS) | 0.41 | b3671 | ilvB | acetolactate synthase large subunit (NCBI) | low | > 76 |
Escherichia coli ECOR27 | 0.50 | NOLOHH_04135 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.56 | NOLOHH_06790 | ilvG | acetolactate synthase 2 catalytic subunit | low | > 75 |
Escherichia coli BL21 | 0.50 | ECD_04111 | | enamine/imine deaminase, reaction intermediate detoxification | 0.56 | ECD_03646 | | acetolactate synthase II, valine insensitive, large subunit | low | > 61 |
Escherichia coli ECRC102 | 0.50 | NIAGMN_09725 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.56 | NIAGMN_12410 | ilvG | acetolactate synthase 2 catalytic subunit | — | — |
Escherichia coli ECRC98 | 0.50 | JDDGAC_15515 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.56 | JDDGAC_18275 | ilvG | acetolactate synthase 2 catalytic subunit | low | > 86 |
Escherichia coli ECRC100 | 0.50 | OKFHMN_11875 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.56 | OKFHMN_14655 | ilvG | acetolactate synthase 2 catalytic subunit | low | > 80 |
Escherichia coli ECRC62 | 0.50 | BNILDI_07375 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.56 | BNILDI_04735 | ilvG | acetolactate synthase 2 catalytic subunit | low | > 75 |
Paraburkholderia sabiae LMG 24235 | 0.49 | QEN71_RS41190 | | RidA family protein | 0.39 | QEN71_RS24225 | | acetolactate synthase 3 catalytic subunit | — | — |
Klebsiella michiganensis M5al | 0.49 | BWI76_RS02985 | | reactive intermediate/imine deaminase | 0.56 | BWI76_RS00960 | | acetolactate synthase 2 catalytic subunit | 0.33 | 73 |
Pedobacter sp. GW460-11-11-14-LB5 | 0.49 | CA265_RS22825 | | reactive intermediate/imine deaminase | 0.41 | CA265_RS15805 | | acetolactate synthase, large subunit, biosynthetic type | 0.87 | 18 |
Rahnella sp. WP5 | 0.48 | EX31_RS12775 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.57 | EX31_RS14990 | | acetolactate synthase 2 catalytic subunit | low | > 89 |
Pantoea sp. MT58 | 0.48 | IAI47_16870 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.56 | IAI47_01020 | | acetolactate synthase 2 catalytic subunit | low | > 76 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.47 | GFF928 | | Endoribonuclease L-PSP | 0.57 | GFF2904 | | Acetolactate synthase large subunit (EC 2.2.1.6) | low | > 78 |
Enterobacter asburiae PDN3 | 0.47 | EX28DRAFT_3444 | | reactive intermediate/imine deaminase | 0.57 | EX28DRAFT_4440 | | acetolactate synthase, large subunit (EC 2.2.1.6) | low | > 76 |
Enterobacter sp. TBS_079 | 0.47 | MPMX20_00542 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.56 | MPMX20_04502 | | Acetolactate synthase isozyme 2 large subunit | 0.46 | 4 |
Pectobacterium carotovorum WPP14 | 0.47 | HER17_RS19520 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.57 | HER17_RS01060 | | acetolactate synthase 2 catalytic subunit | low | > 75 |
Parabacteroides merdae CL09T00C40 | 0.46 | HMPREF1078_RS02020 | | RidA family protein | 0.40 | HMPREF1078_RS16690 | | biosynthetic-type acetolactate synthase large subunit | low | > 61 |
Bacteroides ovatus ATCC 8483 | 0.44 | BACOVA_00589 | | putative endoribonuclease L-PSP | 0.41 | BACOVA_03303 | | acetolactate synthase, large subunit, biosynthetic type | 0.58 | 57 |
Erwinia tracheiphila SCR3 | 0.44 | LU632_RS20960 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.55 | LU632_RS24415 | ilvG | acetolactate synthase 2 catalytic subunit | low | > 74 |
Bacteroides thetaiotaomicron VPI-5482 | 0.44 | BT1336 | | putative translation initiation inhibitor (NCBI ptt file) | 0.41 | BT2077 | | acetolactate synthase large subunit (NCBI ptt file) | 0.69 | 17 |
Desulfovibrio vulgaris Miyazaki F | 0.43 | DvMF_1512 | | endoribonuclease L-PSP (RefSeq) | 0.42 | DvMF_0153 | | acetolactate synthase, large subunit, biosynthetic type (RefSeq) | — | — |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.43 | ABZR88_RS17245 | | RidA family protein | 0.41 | ABZR88_RS11580 | | biosynthetic-type acetolactate synthase large subunit | — | — |
Bacteroides stercoris CC31F | 0.43 | HMPREF1181_RS10885 | | RidA family protein | 0.42 | HMPREF1181_RS08330 | | biosynthetic-type acetolactate synthase large subunit | low | > 56 |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.43 | Echvi_1327 | | endoribonuclease L-PSP, putative | 0.42 | Echvi_2056 | | acetolactate synthase, large subunit, biosynthetic type | low | > 79 |
Synechococcus elongatus PCC 7942 | 0.43 | Synpcc7942_0972 | | YjgF-like protein | 0.43 | Synpcc7942_0139 | ilvB | acetolactate synthase 3 catalytic subunit | — | — |
Serratia liquefaciens MT49 | 0.42 | IAI46_02265 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.56 | IAI46_24360 | | acetolactate synthase 2 catalytic subunit | low | > 86 |
Ralstonia solanacearum UW163 | 0.39 | UW163_RS22060 | | endoribonuclease L-PSP | 0.40 | UW163_RS10675 | | acetolactate synthase 3 large subunit | — | — |
Ralstonia solanacearum IBSBF1503 | 0.39 | RALBFv3_RS20925 | | endoribonuclease L-PSP | 0.40 | RALBFv3_RS03050 | | acetolactate synthase 3 large subunit | — | — |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.38 | CA264_17590 | | RidA family protein | 0.41 | CA264_06930 | | acetolactate synthase, large subunit, biosynthetic type | low | > 74 |
Cupriavidus basilensis FW507-4G11 | 0.36 | RR42_RS16710 | | endoribonuclease L-PSP | 0.39 | RR42_RS05435 | | acetolactate synthase 3 catalytic subunit | — | — |
Bifidobacterium breve UCC2003 | 0.35 | BBR_RS12070 | | endoribonuclease L-PSP | 0.36 | BBR_RS12350 | | acetolactate synthase large subunit | low | > 34 |
Paraburkholderia bryophila 376MFSha3.1 | 0.33 | H281DRAFT_05869 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.40 | H281DRAFT_04551 | | acetolactate synthase, large subunit | — | — |
Variovorax sp. SCN45 | 0.33 | GFF3442 | | RidA/YER057c/UK114 superfamily protein | 0.42 | GFF903 | | Acetolactate synthase large subunit (EC 2.2.1.6) | low | > 127 |
Sinorhizobium meliloti 1021 | 0.33 | SM_b20377 | | translation initiation inhibitor protein | 0.41 | SMc01431 | | acetolactate synthase 3 catalytic subunit | low | > 103 |
Variovorax sp. OAS795 | 0.32 | ABID97_RS22895 | | RidA family protein | 0.41 | ABID97_RS12545 | | biosynthetic-type acetolactate synthase large subunit | low | > 91 |
Dinoroseobacter shibae DFL-12 | 0.31 | Dshi_0720 | | Endoribonuclease L-PSP (RefSeq) | 0.40 | Dshi_1779 | | acetolactate synthase, large subunit, biosynthetic type (RefSeq) | — | — |
Agrobacterium fabrum C58 | 0.30 | Atu3926 | | translation initiation inhibitor | 0.39 | Atu2036 | | acetolactate synthase III, large subunit | low | > 89 |
Azospirillum sp. SherDot2 | 0.30 | MPMX19_04018 | | 2-aminomuconate deaminase | 0.43 | MPMX19_01776 | | Acetolactate synthase isozyme 3 large subunit | — | — |
Herbaspirillum seropedicae SmR1 | 0.28 | HSERO_RS08735 | | hypothetical protein | 0.39 | HSERO_RS08650 | | acetolactate synthase | low | > 78 |
Paraburkholderia graminis OAS925 | 0.28 | ABIE53_000758 | | reactive intermediate/imine deaminase | 0.39 | ABIE53_001574 | | acetolactate synthase-1/2/3 large subunit | — | — |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.28 | GFF3622 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.40 | GFF2981 | | Acetolactate synthase large subunit (EC 2.2.1.6) | low | > 90 |
Rhizobium sp. OAE497 | 0.28 | ABIE40_RS21405 | | RidA family protein | 0.40 | ABIE40_RS11495 | | acetolactate synthase 3 large subunit | low | > 107 |
Caulobacter crescentus NA1000 Δfur | 0.27 | CCNA_02886 | | RutC-family pyrimidine utilization protein C | 0.41 | CCNA_02185 | | acetolactate synthase large subunit | low | > 67 |
Caulobacter crescentus NA1000 | 0.27 | CCNA_02886 | | RutC-family pyrimidine utilization protein C | 0.41 | CCNA_02185 | | acetolactate synthase large subunit | low | > 66 |
Ralstonia solanacearum GMI1000 | 0.26 | RS_RS24425 | | RidA family protein | 0.40 | RS_RS10420 | | acetolactate synthase 3 large subunit | — | — |
Ralstonia sp. UNC404CL21Col | 0.25 | ABZR87_RS17675 | | RidA family protein | 0.39 | ABZR87_RS14955 | | acetolactate synthase 3 catalytic subunit | low | > 80 |
Ralstonia solanacearum PSI07 | 0.25 | RPSI07_RS06815 | | RidA family protein | 0.40 | RPSI07_RS14255 | | acetolactate synthase, large subunit, biosynthetic type | — | — |
Bosea sp. OAE506 | 0.22 | ABIE41_RS17855 | | RidA family protein | 0.41 | ABIE41_RS12890 | | acetolactate synthase 3 large subunit | — | — |
Not shown: 2 genomes with orthologs for Xcc-8004.1205.1 only; 11 genomes with orthologs for Xcc-8004.1059.1 only