Conservation of cofitness between Xcc-8004.1205.1 and Xcc-8004.1059.1 in Xanthomonas campestris pv. campestris strain 8004

90 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.1205.1 hypothetical protein 1.0 Xcc-8004.1059.1 Acetolactate synthase large subunit (EC 2.2.1.6) 0.77 11
Lysobacter sp. OAE881 0.82 ABIE51_RS17260 RidA family protein 0.69 ABIE51_RS17550 acetolactate synthase 2 catalytic subunit 0.88 36
Dyella japonica UNC79MFTsu3.2 0.79 ABZR86_RS11845 RidA family protein 0.36 ABZR86_RS15935 biosynthetic-type acetolactate synthase large subunit 0.77 38
Rhodanobacter denitrificans MT42 0.79 LRK55_RS11525 RidA family protein 0.33 LRK55_RS09950 biosynthetic-type acetolactate synthase large subunit low > 63
Rhodanobacter denitrificans FW104-10B01 0.79 LRK54_RS11800 RidA family protein 0.33 LRK54_RS10310 biosynthetic-type acetolactate synthase large subunit 0.70 8
Rhodanobacter sp. FW510-T8 0.79 OKGIIK_12095 ridA reactive intermediate/imine deaminase 0.32 OKGIIK_13610 ilvB biosynthetic-type acetolactate synthase large subunit low > 52
Pseudomonas stutzeri RCH2 0.64 Psest_3818 endoribonuclease L-PSP, putative 0.37 Psest_1036 acetolactate synthase, large subunit, biosynthetic type
Marinobacter adhaerens HP15 0.62 HP15_306 YjgF-like protein 0.52 HP15_1017 acetolactate synthase, large subunit, biosynthetic type low > 73
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_0208 endoribonuclease L-PSP 0.37 Psyr_0846 acetolactate synthase, large subunit 0.67 22
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_0208 endoribonuclease L-PSP 0.37 Psyr_0846 acetolactate synthase, large subunit low > 86
Pseudomonas putida KT2440 0.61 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase 0.36 PP_4680 acetohydroxybutanoate synthase / acetolactate synthase 0.64 12
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS29515 RidA family protein 0.36 PFLU_RS25650 acetolactate synthase 3 large subunit
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_4360 Bona fide RidA/YjgF/TdcF/RutC subgroup 0.35 Pf6N2E2_5175 Acetolactate synthase large subunit (EC 2.2.1.6) low > 103
Pseudomonas sp. RS175 0.61 PFR28_04425 2-iminobutanoate/2-iminopropanoate deaminase 0.35 PFR28_03699 Acetolactate synthase isozyme 3 large subunit low > 88
Dechlorosoma suillum PS 0.61 Dsui_0312 endoribonuclease L-PSP, putative 0.43 Dsui_1925 acetolactate synthase, large subunit, biosynthetic type
Pseudomonas simiae WCS417 0.61 PS417_27835 endoribonuclease 0.35 PS417_23810 acetolactate synthase 3 catalytic subunit 0.67 26
Pseudomonas fluorescens SBW25 0.61 PFLU_RS29515 RidA family protein 0.36 PFLU_RS25650 acetolactate synthase 3 large subunit
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_2112 Bona fide RidA/YjgF/TdcF/RutC subgroup 0.36 Pf1N1B4_2878 Acetolactate synthase large subunit (EC 2.2.1.6) 0.73 27
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_12475 reactive intermediate/imine deaminase 0.36 AO356_16170 acetolactate synthase 3 catalytic subunit 0.34 68
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_779 Bona fide RidA/YjgF/TdcF/RutC subgroup 0.36 PfGW456L13_1538 Acetolactate synthase large subunit (EC 2.2.1.6) 0.68 18
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_09285 reactive intermediate/imine deaminase 0.36 AO353_14495 acetolactate synthase 3 catalytic subunit 0.53 45
Alteromonas macleodii MIT1002 0.58 MIT1002_00109 Putative reactive intermediate deaminase TdcF 0.37 MIT1002_00503 Acetolactate synthase isozyme 3 large subunit low > 70
Castellaniella sp019104865 MT123 0.57 ABCV34_RS03565 Rid family detoxifying hydrolase 0.41 ABCV34_RS12235 biosynthetic-type acetolactate synthase large subunit
Shewanella amazonensis SB2B 0.57 Sama_0263 YjgF-like protein (RefSeq) 0.54 Sama_3281 acetolactate synthase 2 catalytic subunit (RefSeq) 0.70 11
Acinetobacter radioresistens SK82 0.57 MPMX26_02797 2-iminobutanoate/2-iminopropanoate deaminase 0.37 MPMX26_00472 Acetolactate synthase isozyme 3 large subunit 0.80 11
Pseudomonas sp. S08-1 0.57 OH686_13545 RidA/YER057c/UK114 superfamily protein 0.37 OH686_08130 acetolactate synthase, large subunit, biosynthetic type low > 80
Shewanella loihica PV-4 0.56 Shew_3500 putative endoribonuclease L-PSP (RefSeq) 0.53 Shew_0289 acetolactate synthase 2 catalytic subunit (RefSeq) low > 60
Azospirillum brasilense Sp245 0.56 AZOBR_RS32435 dfrA 0.42 AZOBR_RS06560 acetolactate synthase low > 97
Shewanella oneidensis MR-1 0.56 SO0358 endoribonuclease L-PSP, putative (NCBI ptt file) 0.54 SO4347 ilvG acetolactate synthase II, large subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.56 Shewana3_3813 putative endoribonuclease L-PSP (RefSeq) 0.54 Shewana3_0356 acetolactate synthase 2 catalytic subunit (RefSeq) low > 73
Desulfovibrio vulgaris Hildenborough JW710 0.53 DVU2647 endoribonuclease, L-PSP family (TIGR) 0.42 DVU1376 ilvB-2 acetolactate synthase, large subunit, biosynthetic type (TIGR) low > 55
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_12735 RidA family protein 0.51 CSW01_00155 acetolactate synthase 2 catalytic subunit low > 62
Dickeya dadantii 3937 0.51 DDA3937_RS01915 2-iminobutanoate/2-iminopropanoate deaminase 0.58 DDA3937_RS20170 acetolactate synthase 2 catalytic subunit low > 74
Phocaeicola vulgatus CL09T03C04 0.51 HMPREF1058_RS18400 RidA family protein 0.42 HMPREF1058_RS16820 biosynthetic-type acetolactate synthase large subunit 0.53 42
Phocaeicola dorei CL03T12C01 0.51 ABI39_RS14715 RidA family protein 0.42 ABI39_RS12720 biosynthetic-type acetolactate synthase large subunit low > 72
Dickeya dianthicola 67-19 0.51 HGI48_RS01890 2-iminobutanoate/2-iminopropanoate deaminase 0.57 HGI48_RS20310 acetolactate synthase 2 catalytic subunit
Dickeya dianthicola ME23 0.51 DZA65_RS01960 2-iminobutanoate/2-iminopropanoate deaminase 0.57 DZA65_RS21350 acetolactate synthase 2 catalytic subunit low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_03791 2-iminobutanoate/2-iminopropanoate deaminase 0.56 OHPLBJKB_04285 Acetolactate synthase isozyme 2 large subunit low > 73
Escherichia fergusonii Becca 0.50 EFB2_04290 2-iminobutanoate/2-iminopropanoate deaminase 0.56 EFB2_04868 Acetolactate synthase isozyme 2 large subunit low > 86
Escherichia coli ECRC101 0.50 MCAODC_02380 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.56 MCAODC_05160 ilvG acetolactate synthase 2 catalytic subunit low > 87
Escherichia coli ECOR38 0.50 HEPCGN_10070 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.56 HEPCGN_13365 ilvG acetolactate synthase 2 catalytic subunit low > 87
Escherichia coli ECRC99 0.50 KEDOAH_16280 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.56 KEDOAH_13495 ilvG acetolactate synthase 2 catalytic subunit
Escherichia coli Nissle 1917 0.50 ECOLIN_RS24615 2-iminobutanoate/2-iminopropanoate deaminase 0.56 ECOLIN_RS21650 acetolactate synthase 2 catalytic subunit low > 55
Escherichia coli BW25113 0.50 b4243 yjgF orf, hypothetical protein (VIMSS) 0.41 b3671 ilvB acetolactate synthase large subunit (NCBI) low > 76
Escherichia coli ECOR27 0.50 NOLOHH_04135 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.56 NOLOHH_06790 ilvG acetolactate synthase 2 catalytic subunit low > 75
Escherichia coli BL21 0.50 ECD_04111 enamine/imine deaminase, reaction intermediate detoxification 0.56 ECD_03646 acetolactate synthase II, valine insensitive, large subunit low > 61
Escherichia coli ECRC102 0.50 NIAGMN_09725 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.56 NIAGMN_12410 ilvG acetolactate synthase 2 catalytic subunit
Escherichia coli ECRC98 0.50 JDDGAC_15515 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.56 JDDGAC_18275 ilvG acetolactate synthase 2 catalytic subunit low > 86
Escherichia coli ECRC100 0.50 OKFHMN_11875 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.56 OKFHMN_14655 ilvG acetolactate synthase 2 catalytic subunit low > 80
Escherichia coli ECRC62 0.50 BNILDI_07375 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.56 BNILDI_04735 ilvG acetolactate synthase 2 catalytic subunit low > 75
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS41190 RidA family protein 0.39 QEN71_RS24225 acetolactate synthase 3 catalytic subunit
Klebsiella michiganensis M5al 0.49 BWI76_RS02985 reactive intermediate/imine deaminase 0.56 BWI76_RS00960 acetolactate synthase 2 catalytic subunit 0.33 73
Pedobacter sp. GW460-11-11-14-LB5 0.49 CA265_RS22825 reactive intermediate/imine deaminase 0.41 CA265_RS15805 acetolactate synthase, large subunit, biosynthetic type 0.87 18
Rahnella sp. WP5 0.48 EX31_RS12775 2-iminobutanoate/2-iminopropanoate deaminase 0.57 EX31_RS14990 acetolactate synthase 2 catalytic subunit low > 89
Pantoea sp. MT58 0.48 IAI47_16870 2-iminobutanoate/2-iminopropanoate deaminase 0.56 IAI47_01020 acetolactate synthase 2 catalytic subunit low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF928 Endoribonuclease L-PSP 0.57 GFF2904 Acetolactate synthase large subunit (EC 2.2.1.6) low > 78
Enterobacter asburiae PDN3 0.47 EX28DRAFT_3444 reactive intermediate/imine deaminase 0.57 EX28DRAFT_4440 acetolactate synthase, large subunit (EC 2.2.1.6) low > 76
Enterobacter sp. TBS_079 0.47 MPMX20_00542 2-iminobutanoate/2-iminopropanoate deaminase 0.56 MPMX20_04502 Acetolactate synthase isozyme 2 large subunit 0.46 4
Pectobacterium carotovorum WPP14 0.47 HER17_RS19520 2-iminobutanoate/2-iminopropanoate deaminase 0.57 HER17_RS01060 acetolactate synthase 2 catalytic subunit low > 75
Parabacteroides merdae CL09T00C40 0.46 HMPREF1078_RS02020 RidA family protein 0.40 HMPREF1078_RS16690 biosynthetic-type acetolactate synthase large subunit low > 61
Bacteroides ovatus ATCC 8483 0.44 BACOVA_00589 putative endoribonuclease L-PSP 0.41 BACOVA_03303 acetolactate synthase, large subunit, biosynthetic type 0.58 57
Erwinia tracheiphila SCR3 0.44 LU632_RS20960 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.55 LU632_RS24415 ilvG acetolactate synthase 2 catalytic subunit low > 74
Bacteroides thetaiotaomicron VPI-5482 0.44 BT1336 putative translation initiation inhibitor (NCBI ptt file) 0.41 BT2077 acetolactate synthase large subunit (NCBI ptt file) 0.69 17
Desulfovibrio vulgaris Miyazaki F 0.43 DvMF_1512 endoribonuclease L-PSP (RefSeq) 0.42 DvMF_0153 acetolactate synthase, large subunit, biosynthetic type (RefSeq)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS17245 RidA family protein 0.41 ABZR88_RS11580 biosynthetic-type acetolactate synthase large subunit
Bacteroides stercoris CC31F 0.43 HMPREF1181_RS10885 RidA family protein 0.42 HMPREF1181_RS08330 biosynthetic-type acetolactate synthase large subunit low > 56
Echinicola vietnamensis KMM 6221, DSM 17526 0.43 Echvi_1327 endoribonuclease L-PSP, putative 0.42 Echvi_2056 acetolactate synthase, large subunit, biosynthetic type low > 79
Synechococcus elongatus PCC 7942 0.43 Synpcc7942_0972 YjgF-like protein 0.43 Synpcc7942_0139 ilvB acetolactate synthase 3 catalytic subunit
Serratia liquefaciens MT49 0.42 IAI46_02265 2-iminobutanoate/2-iminopropanoate deaminase 0.56 IAI46_24360 acetolactate synthase 2 catalytic subunit low > 86
Ralstonia solanacearum UW163 0.39 UW163_RS22060 endoribonuclease L-PSP 0.40 UW163_RS10675 acetolactate synthase 3 large subunit
Ralstonia solanacearum IBSBF1503 0.39 RALBFv3_RS20925 endoribonuclease L-PSP 0.40 RALBFv3_RS03050 acetolactate synthase 3 large subunit
Pontibacter actiniarum KMM 6156, DSM 19842 0.38 CA264_17590 RidA family protein 0.41 CA264_06930 acetolactate synthase, large subunit, biosynthetic type low > 74
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS16710 endoribonuclease L-PSP 0.39 RR42_RS05435 acetolactate synthase 3 catalytic subunit
Bifidobacterium breve UCC2003 0.35 BBR_RS12070 endoribonuclease L-PSP 0.36 BBR_RS12350 acetolactate synthase large subunit low > 34
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_05869 2-iminobutanoate/2-iminopropanoate deaminase 0.40 H281DRAFT_04551 acetolactate synthase, large subunit
Variovorax sp. SCN45 0.33 GFF3442 RidA/YER057c/UK114 superfamily protein 0.42 GFF903 Acetolactate synthase large subunit (EC 2.2.1.6) low > 127
Sinorhizobium meliloti 1021 0.33 SM_b20377 translation initiation inhibitor protein 0.41 SMc01431 acetolactate synthase 3 catalytic subunit low > 103
Variovorax sp. OAS795 0.32 ABID97_RS22895 RidA family protein 0.41 ABID97_RS12545 biosynthetic-type acetolactate synthase large subunit low > 91
Dinoroseobacter shibae DFL-12 0.31 Dshi_0720 Endoribonuclease L-PSP (RefSeq) 0.40 Dshi_1779 acetolactate synthase, large subunit, biosynthetic type (RefSeq)
Agrobacterium fabrum C58 0.30 Atu3926 translation initiation inhibitor 0.39 Atu2036 acetolactate synthase III, large subunit low > 89
Azospirillum sp. SherDot2 0.30 MPMX19_04018 2-aminomuconate deaminase 0.43 MPMX19_01776 Acetolactate synthase isozyme 3 large subunit
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS08735 hypothetical protein 0.39 HSERO_RS08650 acetolactate synthase low > 78
Paraburkholderia graminis OAS925 0.28 ABIE53_000758 reactive intermediate/imine deaminase 0.39 ABIE53_001574 acetolactate synthase-1/2/3 large subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF3622 Bona fide RidA/YjgF/TdcF/RutC subgroup 0.40 GFF2981 Acetolactate synthase large subunit (EC 2.2.1.6) low > 90
Rhizobium sp. OAE497 0.28 ABIE40_RS21405 RidA family protein 0.40 ABIE40_RS11495 acetolactate synthase 3 large subunit low > 107
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_02886 RutC-family pyrimidine utilization protein C 0.41 CCNA_02185 acetolactate synthase large subunit low > 67
Caulobacter crescentus NA1000 0.27 CCNA_02886 RutC-family pyrimidine utilization protein C 0.41 CCNA_02185 acetolactate synthase large subunit low > 66
Ralstonia solanacearum GMI1000 0.26 RS_RS24425 RidA family protein 0.40 RS_RS10420 acetolactate synthase 3 large subunit
Ralstonia sp. UNC404CL21Col 0.25 ABZR87_RS17675 RidA family protein 0.39 ABZR87_RS14955 acetolactate synthase 3 catalytic subunit low > 80
Ralstonia solanacearum PSI07 0.25 RPSI07_RS06815 RidA family protein 0.40 RPSI07_RS14255 acetolactate synthase, large subunit, biosynthetic type
Bosea sp. OAE506 0.22 ABIE41_RS17855 RidA family protein 0.41 ABIE41_RS12890 acetolactate synthase 3 large subunit

Not shown: 2 genomes with orthologs for Xcc-8004.1205.1 only; 11 genomes with orthologs for Xcc-8004.1059.1 only