Conservation of cofitness between TX73_018705 and TX73_010535 in Rhodopseudomonas palustris CGA009

87 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_018705 energy-dependent translational throttle protein EttA 1.0 TX73_010535 biotin synthase BioB 0.52 17
Agrobacterium fabrum C58 0.74 Atu2125 ABC transporter, nucleotide binding/ATPase protein 0.63 Atu3997 biotin synthetase low > 89
Rhizobium sp. OAE497 0.74 ABIE40_RS11960 energy-dependent translational throttle protein EttA 0.61 ABIE40_RS21075 biotin synthase BioB low > 107
Phaeobacter inhibens DSM 17395 0.70 PGA1_c26300 ABC transporter, ATP-binding protein 0.64 PGA1_c09120 biotin synthase BioB low > 62
Caulobacter crescentus NA1000 0.68 CCNA_02231 ABC transporter ATP-binding protein 0.56 CCNA_03636 biotin synthase
Caulobacter crescentus NA1000 Δfur 0.68 CCNA_02231 ABC transporter ATP-binding protein 0.56 CCNA_03636 biotin synthase
Magnetospirillum magneticum AMB-1 0.67 AMB_RS04455 energy-dependent translational throttle protein EttA 0.57 AMB_RS13865 biotin synthase
Sphingomonas koreensis DSMZ 15582 0.61 Ga0059261_0048 ATP-binding cassette protein, ChvD family 0.59 Ga0059261_3989 biotin synthase (EC 2.8.1.6)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.61 ABZR88_RS04815 energy-dependent translational throttle protein EttA 0.51 ABZR88_RS10190 biotin synthase BioB low > 71
Echinicola vietnamensis KMM 6221, DSM 17526 0.60 Echvi_0034 ATP-binding cassette protein, ChvD family 0.53 Echvi_2566 biotin synthetase low > 79
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS02310 energy-dependent translational throttle protein EttA 0.54 ABZR87_RS06265 biotin synthase BioB 0.45 51
Pontibacter actiniarum KMM 6156, DSM 19842 0.60 CA264_18150 energy-dependent translational throttle protein EttA 0.51 CA264_02425 biotin synthase BioB low > 74
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS06640 energy-dependent translational throttle protein EttA 0.55 RALBFv3_RS10465 biotin synthase BioB low > 76
Ralstonia solanacearum UW163 0.60 UW163_RS06985 energy-dependent translational throttle protein EttA 0.55 UW163_RS03115 biotin synthase BioB
Rhodanobacter denitrificans FW104-10B01 0.60 LRK54_RS04630 energy-dependent translational throttle protein EttA 0.54 LRK54_RS10260 biotin synthase BioB low > 59
Desulfovibrio vulgaris Miyazaki F 0.60 DvMF_1058 putative ABC transporter ATP-binding protein (RefSeq) 0.25 DvMF_1001 biotin synthase (RefSeq) low > 51
Pedobacter sp. GW460-11-11-14-LB5 0.60 CA265_RS14910 ABC transporter ATP-binding protein 0.51 CA265_RS09475 biotin synthase BioB low > 88
Ralstonia solanacearum GMI1000 0.59 RS_RS14590 energy-dependent translational throttle protein EttA 0.55 RS_RS01305 biotin synthase low > 80
Dyella japonica UNC79MFTsu3.2 0.59 ABZR86_RS10725 energy-dependent translational throttle protein EttA 0.57 ABZR86_RS15840 biotin synthase BioB
Pseudomonas sp. S08-1 0.59 OH686_16240 Energy-dependent translational throttle protein EttA 0.59 OH686_10355 biotin synthase low > 80
Ralstonia solanacearum PSI07 0.59 RPSI07_RS10585 energy-dependent translational throttle protein EttA 0.55 RPSI07_RS22850 biotin synthase BioB low > 81
Parabacteroides merdae CL09T00C40 0.59 HMPREF1078_RS07420 energy-dependent translational throttle protein EttA 0.25 HMPREF1078_RS15300 biotin synthase BioB low > 61
Rhodanobacter denitrificans MT42 0.59 LRK55_RS04405 energy-dependent translational throttle protein EttA 0.54 LRK55_RS09900 biotin synthase BioB
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF3531 ABC transporter 0.54 GFF3992 Biotin synthase (EC 2.8.1.6) low > 90
Castellaniella sp019104865 MT123 0.59 ABCV34_RS08155 energy-dependent translational throttle protein EttA 0.52 ABCV34_RS15280 biotin synthase BioB low > 48
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0881 ATP-binding cassette protein, ChvD family 0.59 B158DRAFT_0864 biotin synthase (EC 2.8.1.6)
Rhodanobacter sp. FW510-T8 0.59 OKGIIK_11445 ettA energy-dependent translational throttle protein EttA 0.55 OKGIIK_13650 bioB biotin synthase BioB low > 52
Desulfovibrio vulgaris Hildenborough JW710 0.59 DVU2586 ABC transporter, ATP-binding protein (TIGR) 0.25 DVU2558 bioB biotin synthase (Dmitry Rodionov) low > 55
Dickeya dadantii 3937 0.58 DDA3937_RS18460 energy-dependent translational throttle protein EttA 0.57 DDA3937_RS08510 biotin synthase BioB low > 74
Pseudomonas putida KT2440 0.58 PP_0674 ADP/ATP ratio sensor and inhibitor of translation 0.59 PP_0362 Biotin synthase low > 96
Dickeya dianthicola ME23 0.58 DZA65_RS19530 energy-dependent translational throttle protein EttA 0.57 DZA65_RS08965 biotin synthase BioB low > 75
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS18575 ABC transporter ATP-binding protein 0.56 RR42_RS00940 biotin synthase low > 128
Dickeya dianthicola 67-19 0.58 HGI48_RS18390 energy-dependent translational throttle protein EttA 0.56 HGI48_RS08675 biotin synthase BioB low > 71
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS23550 ABC transporter ATP-binding protein 0.55 HSERO_RS12235 biotin synthase low > 78
Paraburkholderia graminis OAS925 0.58 ABIE53_003656 sulfate-transporting ATPase 0.57 ABIE53_000577 biotin synthase low > 113
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS17480 ABC transporter ATP-binding protein 0.57 BPHYT_RS02150 biotin synthase low > 109
Pantoea sp. MT58 0.58 IAI47_16325 energy-dependent translational throttle protein EttA 0.58 IAI47_13530 biotin synthase BioB low > 76
Pseudomonas stutzeri RCH2 0.58 Psest_3433 ATP-binding cassette protein, ChvD family 0.59 Psest_0411 biotin synthetase low > 67
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS27625 energy-dependent translational throttle protein EttA 0.56 QEN71_RS01085 biotin synthase BioB
Escherichia coli ECRC100 0.58 OKFHMN_11175 ettA energy-dependent translational throttle protein EttA 0.57 OKFHMN_06400 bioB biotin synthase BioB low > 80
Escherichia coli ECRC62 0.58 BNILDI_08090 ettA energy-dependent translational throttle protein EttA 0.57 BNILDI_21040 bioB biotin synthase BioB low > 75
Escherichia coli ECRC99 0.58 KEDOAH_16980 ettA energy-dependent translational throttle protein EttA 0.57 KEDOAH_21510 bioB biotin synthase BioB
Escherichia coli BW25113 0.58 b4391 yjjK fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) 0.57 b0775 bioB biotin synthase (NCBI) low > 76
Escherichia coli BL21 0.58 ECD_04267 energy-dependent translational throttle A 0.57 ECD_00742 biotin synthase low > 61
Escherichia coli ECRC102 0.58 NIAGMN_09025 ettA energy-dependent translational throttle protein EttA 0.57 NIAGMN_04445 bioB biotin synthase BioB
Escherichia coli ECRC101 0.58 MCAODC_01690 ettA energy-dependent translational throttle protein EttA 0.57 MCAODC_25615 bioB biotin synthase BioB low > 87
Serratia liquefaciens MT49 0.58 IAI46_02965 energy-dependent translational throttle protein EttA 0.56 IAI46_06525 biotin synthase BioB low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_03670 Energy-dependent translational throttle protein EttA 0.57 OHPLBJKB_02938 Biotin synthase low > 73
Escherichia coli Nissle 1917 0.58 ECOLIN_RS25205 energy-dependent translational throttle protein EttA 0.57 ECOLIN_RS04130 biotin synthase BioB low > 55
Escherichia coli ECRC98 0.58 JDDGAC_14770 ettA energy-dependent translational throttle protein EttA 0.57 JDDGAC_10035 bioB biotin synthase BioB low > 86
Pseudomonas sp. RS175 0.58 PFR28_03784 Energy-dependent translational throttle protein EttA 0.58 PFR28_04103 Biotin synthase low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF1059 ABC transporter, ATP-binding protein 0.57 GFF671 Biotin synthase (EC 2.8.1.6) low > 78
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_05699 sulfate-transporting ATPase 0.57 H281DRAFT_02097 biotin synthase low > 103
Enterobacter sp. TBS_079 0.58 MPMX20_00698 Energy-dependent translational throttle protein EttA 0.56 MPMX20_01403 Biotin synthase low > 85
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_4264 ABC transporter 0.59 Psyr_4687 biotin synthase low > 86
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_15735 ABC transporter ATP-binding protein 0.58 AO356_14135 biotin synthase low > 104
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_4264 ABC transporter 0.59 Psyr_4687 biotin synthase low > 86
Escherichia coli ECOR27 0.58 NOLOHH_03505 ettA energy-dependent translational throttle protein EttA 0.57 NOLOHH_22770 bioB biotin synthase BioB low > 75
Enterobacter asburiae PDN3 0.58 EX28DRAFT_3601 ATP-binding cassette protein, ChvD family 0.56 EX28DRAFT_2216 biotin synthase (EC 2.8.1.6) low > 76
Escherichia coli ECOR38 0.58 HEPCGN_09180 ettA energy-dependent translational throttle protein EttA 0.57 HEPCGN_01640 bioB biotin synthase BioB low > 87
Escherichia fergusonii Becca 0.58 EFB2_04053 Energy-dependent translational throttle protein EttA 0.57 EFB2_03330 Biotin synthase low > 86
Klebsiella michiganensis M5al 0.58 BWI76_RS04175 energy-dependent translational throttle protein EttA 0.58 BWI76_RS08760 biotin synthase low > 92
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_5084 Glutathione-regulated potassium-efflux system ATP-binding protein 0.58 Pf6N2E2_4759 Biotin synthase (EC 2.8.1.6) low > 103
Dechlorosoma suillum PS 0.58 Dsui_2746 ATP-binding cassette protein, ChvD family 0.56 Dsui_1297 biotin synthetase low > 51
Alteromonas macleodii MIT1002 0.57 MIT1002_02704 putative ABC transporter ATP-binding protein 0.58 MIT1002_01379 Biotin synthase low > 70
Erwinia tracheiphila SCR3 0.57 LU632_RS02565 ettA energy-dependent translational throttle protein EttA 0.58 LU632_RS09130 bioB biotin synthase BioB
Pectobacterium carotovorum WPP14 0.57 HER17_RS02745 energy-dependent translational throttle protein EttA 0.57 HER17_RS13460 biotin synthase BioB low > 75
Acidovorax sp. GW101-3H11 0.57 Ac3H11_387 ABC transporter ATP-binding protein 0.50 Ac3H11_2272 Biotin synthase (EC 2.8.1.6)
Phocaeicola dorei CL03T12C01 0.57 ABI39_RS14035 energy-dependent translational throttle protein EttA 0.22 ABI39_RS14240 biotin synthase BioB low > 72
Phocaeicola vulgatus CL09T03C04 0.57 HMPREF1058_RS17820 energy-dependent translational throttle protein EttA 0.22 HMPREF1058_RS17950 biotin synthase BioB low > 67
Marinobacter adhaerens HP15 0.57 HP15_488 ABC transporter ATP-binding protein-like protein 0.61 HP15_2486 biotin synthase low > 73
Mycobacterium tuberculosis H37Rv 0.57 Rv2477c Probable macrolide-transport ATP-binding protein ABC transporter 0.25 Rv1589 Probable biotin synthetase BioB
Lysobacter sp. OAE881 0.57 ABIE51_RS04610 energy-dependent translational throttle protein EttA 0.59 ABIE51_RS01140 biotin synthase BioB
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_1453 Glutathione-regulated potassium-efflux system ATP-binding protein 0.58 PfGW456L13_1147 Biotin synthase (EC 2.8.1.6) low > 87
Variovorax sp. SCN45 0.57 GFF6780 Energy-dependent translational throttle protein EttA 0.50 GFF937 Biotin synthase (EC 2.8.1.6) low > 127
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_03650 energy-dependent translational throttle protein EttA 0.57 CSW01_05645 biotin synthase low > 62
Pseudomonas simiae WCS417 0.57 PS417_24265 ABC transporter ATP-binding protein 0.58 PS417_26005 biotin synthase low > 88
Pseudomonas fluorescens SBW25 0.57 PFLU_RS26180 energy-dependent translational throttle protein EttA 0.59 PFLU_RS27650 biotin synthase BioB low > 109
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS26180 energy-dependent translational throttle protein EttA 0.59 PFLU_RS27650 biotin synthase BioB low > 109
Rahnella sp. WP5 0.57 EX31_RS04000 energy-dependent translational throttle protein EttA 0.57 EX31_RS23695 biotin synthase BioB low > 89
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_14030 ABC transporter ATP-binding protein 0.58 AO353_07525 biotin synthase low > 101
Shewanella loihica PV-4 0.56 Shew_1183 putative ABC transporter ATP-binding protein (RefSeq) 0.56 Shew_1719 biotin synthase (RefSeq)
Acinetobacter radioresistens SK82 0.56 MPMX26_02832 Energy-dependent translational throttle protein EttA 0.59 MPMX26_01785 Biotin synthase low > 36
Shewanella oneidensis MR-1 0.56 SO3472 ABC transporter, ATP-binding protein (NCBI ptt file) 0.59 SO2740 bioB biotin synthase (NCBI ptt file)
Shewanella sp. ANA-3 0.56 Shewana3_1093 putative ABC transporter ATP-binding protein (RefSeq) 0.59 Shewana3_2519 biotin synthase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.56 Sama_1013 putative ABC transporter ATP-binding protein (RefSeq) 0.60 Sama_1438 biotin synthase (RefSeq)
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.4400.1 ABC transporter, ATP-binding protein 0.56 Xcc-8004.505.1 Biotin synthase (EC 2.8.1.6)
Synechococcus elongatus PCC 7942 0.31 Synpcc7942_1381 ATPase 0.50 Synpcc7942_0419 bioB biotin synthase

Not shown: 11 genomes with orthologs for TX73_018705 only; 5 genomes with orthologs for TX73_010535 only