Conservation of cofitness between TX73_000960 and TX73_008710 in Rhodopseudomonas palustris CGA009

90 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_000960 dihydrolipoyl dehydrogenase 1.0 TX73_008710 superoxide dismutase 0.46 12
Bosea sp. OAE506 0.72 ABIE41_RS08990 dihydrolipoyl dehydrogenase 0.81 ABIE41_RS22480 superoxide dismutase
Sinorhizobium meliloti 1021 0.69 SMc02487 dihydrolipoamide dehydrogenase 0.78 SMc00043 superoxide dismutase Fe protein
Rhizobium sp. OAE497 0.68 ABIE40_RS17960 dihydrolipoyl dehydrogenase 0.76 ABIE40_RS22300 superoxide dismutase
Agrobacterium fabrum C58 0.68 Atu2632 dihydrolipoamide dehydrogenase 0.76 Atu0876 superoxide dismutase
Caulobacter crescentus NA1000 0.63 CCNA_00346 dihydrolipoamide dehydrogenase 0.44 CCNA_03672 superoxide dismutase
Caulobacter crescentus NA1000 Δfur 0.63 CCNA_00346 dihydrolipoamide dehydrogenase 0.44 CCNA_03672 superoxide dismutase
Azospirillum brasilense Sp245 0.62 AZOBR_RS03960 dihydrolipoamide dehydrogenase 0.58 AZOBR_RS15415 superoxide dismutase
Azospirillum sp. SherDot2 0.61 MPMX19_02113 Dihydrolipoyl dehydrogenase 3 0.55 MPMX19_01161 Superoxide dismutase [Fe]
Rhodospirillum rubrum S1H 0.60 Rru_A1215 Dihydrolipoamide dehydrogenase (NCBI) 0.52 Rru_A1760 Superoxide dismutase (NCBI)
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_11880 dihydrolipoamide dehydrogenase 0.53 AO356_05005 superoxide dismutase
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_1976 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 0.53 Pf1N1B4_711 Superoxide dismutase [Fe] (EC 1.15.1.1)
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_4251 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 0.52 Pf6N2E2_2851 Superoxide dismutase [Fe] (EC 1.15.1.1)
Pseudomonas sp. RS175 0.60 PFR28_04545 Dihydrolipoyl dehydrogenase 3 0.53 PFR28_00606 Superoxide dismutase [Fe]
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_698 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 0.53 PfGW456L13_1779 Superoxide dismutase [Fe] (EC 1.15.1.1)
Brevundimonas sp. GW460-12-10-14-LB2 0.59 A4249_RS12115 dihydrolipoyl dehydrogenase 0.51 A4249_RS00445 superoxide dismutase
Magnetospirillum magneticum AMB-1 0.59 AMB_RS20050 dihydrolipoyl dehydrogenase 0.53 AMB_RS12630 superoxide dismutase
Pseudomonas sp. S08-1 0.59 OH686_23900 dihydrolipoyl dehydrogenase 0.51 OH686_07215 Superoxide dismutase [Fe]
Phaeobacter inhibens DSM 17395 0.58 PGA1_c03550 dihydrolipoyl dehydrogenase 2 0.57 PGA1_c19110 superoxide dismutase SodB
Dinoroseobacter shibae DFL-12 0.58 Dshi_2886 dihydrolipoamide dehydrogenase (RefSeq) 0.57 Dshi_1067 Superoxide dismutase (RefSeq)
Pseudomonas putida KT2440 0.58 PP_5366 dihydrolipoyl dehydrogenase 0.53 PP_0915 superoxide dismutase (Fe)
Sphingomonas koreensis DSMZ 15582 0.56 Ga0059261_1343 dihydrolipoamide dehydrogenase (EC 1.8.1.4) 0.40 Ga0059261_0487 Superoxide dismutase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.55 ABZR88_RS16575 dihydrolipoyl dehydrogenase 0.48 ABZR88_RS20755 superoxide dismutase
Echinicola vietnamensis KMM 6221, DSM 17526 0.55 Echvi_0770 dihydrolipoamide dehydrogenase 0.48 Echvi_1593 Superoxide dismutase
Pontibacter actiniarum KMM 6156, DSM 19842 0.52 CA264_18500 dihydrolipoyl dehydrogenase 0.54 CA264_14325 superoxide dismutase
Pedobacter sp. GW460-11-11-14-LB5 0.52 CA265_RS24150 dihydrolipoyl dehydrogenase 0.50 CA265_RS19695 superoxide dismutase
Dechlorosoma suillum PS 0.51 Dsui_2219 dihydrolipoamide dehydrogenase 0.47 Dsui_3269 superoxide dismutase
Paraburkholderia graminis OAS925 0.50 ABIE53_002451 dihydrolipoamide dehydrogenase 0.49 ABIE53_003343 Fe-Mn family superoxide dismutase
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_05115 dihydrolipoamide dehydrogenase 0.49 H281DRAFT_04108 superoxide dismutase, Fe-Mn family
Castellaniella sp019104865 MT123 0.50 ABCV34_RS01730 dihydrolipoyl dehydrogenase 0.45 ABCV34_RS05325 superoxide dismutase [Fe]
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS23050 dihydrolipoyl dehydrogenase 0.49 QEN71_RS02840 Fe-Mn family superoxide dismutase
Pseudomonas stutzeri RCH2 0.50 Psest_2492 dihydrolipoamide dehydrogenase 0.51 Psest_1164 Superoxide dismutase
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS12930 dihydrolipoamide dehydrogenase 0.53 RR42_RS03480 superoxide dismutase
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS15590 dihydrolipoyl dehydrogenase 0.52 RALBFv3_RS05055 superoxide dismutase
Ralstonia solanacearum UW163 0.49 UW163_RS13050 dihydrolipoyl dehydrogenase 0.52 UW163_RS08570 superoxide dismutase
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS08120 dihydrolipoamide dehydrogenase 0.49 BPHYT_RS15860 superoxide dismutase
Marinobacter adhaerens HP15 0.49 HP15_1523 dihydrolipoamide dehydrogenase 0.48 HP15_2351 superoxide dismutase, Fe
Ralstonia solanacearum PSI07 0.49 RPSI07_RS17765 dihydrolipoyl dehydrogenase 0.51 RPSI07_RS12240 superoxide dismutase
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_2011 dihydrolipoamide dehydrogenase 0.51 Psyr_4059 Superoxide dismutase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_2011 dihydrolipoamide dehydrogenase 0.51 Psyr_4059 Superoxide dismutase
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS11120 dihydrolipoyl dehydrogenase 0.51 ABZR87_RS00705 superoxide dismutase [Fe]
Ralstonia solanacearum GMI1000 0.49 RS_RS06370 dihydrolipoyl dehydrogenase 0.48 RS_RS12665 superoxide dismutase
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS05930 dihydrolipoyl dehydrogenase 0.48 ABZR86_RS09825 superoxide dismutase [Fe]
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_01825 dihydrolipoamide dehydrogenase 0.53 AO353_03930 superoxide dismutase
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_05930 lpdA dihydrolipoyl dehydrogenase 0.46 OKGIIK_03055 sodA superoxide dismutase [Fe]
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF4875 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) 0.48 GFF4512 Superoxide dismutase [Fe] (EC 1.15.1.1)
Variovorax sp. SCN45 0.48 GFF981 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) 0.47 GFF3506 Superoxide dismutase [Fe] (EC 1.15.1.1)
Variovorax sp. OAS795 0.48 ABID97_RS14155 dihydrolipoyl dehydrogenase 0.48 ABID97_RS16940 Fe-Mn family superoxide dismutase
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS14875 dihydrolipoamide dehydrogenase 0.46 HSERO_RS05845 superoxide dismutase
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS00960 dihydrolipoyl dehydrogenase 0.45 LRK54_RS13820 superoxide dismutase
Pseudomonas fluorescens SBW25 0.47 PFLU_RS08965 dihydrolipoyl dehydrogenase 0.54 PFLU_RS23805 superoxide dismutase
Rhodanobacter denitrificans MT42 0.47 LRK55_RS00735 dihydrolipoyl dehydrogenase 0.45 LRK55_RS13535 Fe-Mn family superoxide dismutase
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS08965 dihydrolipoyl dehydrogenase 0.54 PFLU_RS23805 superoxide dismutase
Pseudomonas simiae WCS417 0.47 PS417_08905 dihydrolipoamide dehydrogenase 0.54 PS417_22180 superoxide dismutase
Acidovorax sp. GW101-3H11 0.47 Ac3H11_2465 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) 0.48 Ac3H11_2381 Superoxide dismutase [Fe] (EC 1.15.1.1)
Acinetobacter radioresistens SK82 0.46 MPMX26_00753 Dihydrolipoyl dehydrogenase 0.54 MPMX26_00996 Superoxide dismutase [Fe]
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.3414.1 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) 0.50 Xcc-8004.2280.1 Manganese superoxide dismutase (EC 1.15.1.1)
Lysobacter sp. OAE881 0.45 ABIE51_RS08980 dihydrolipoyl dehydrogenase 0.45 ABIE51_RS15385 Fe-Mn family superoxide dismutase
Shewanella oneidensis MR-1 0.38 SO0426 lpdA pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase (NCBI ptt file) 0.46 SO2881 SodB superoxide dismutase, Fe (NCBI ptt file)
Shewanella sp. ANA-3 0.38 Shewana3_0428 dihydrolipoamide dehydrogenase (RefSeq) 0.46 Shewana3_1639 manganese and iron superoxide dismutase (RefSeq)
Pectobacterium carotovorum WPP14 0.38 HER17_RS03300 dihydrolipoyl dehydrogenase 0.42 HER17_RS21110 superoxide dismutase [Mn]
Shewanella loihica PV-4 0.37 Shew_3429 dihydrolipoamide dehydrogenase (RefSeq) 0.46 Shew_1834 superoxide dismutase (RefSeq)
Shewanella amazonensis SB2B 0.37 Sama_0377 dihydrolipoamide dehydrogenase (RefSeq) 0.48 Sama_1920 superoxide dismutase (RefSeq)
Erwinia tracheiphila SCR3 0.37 LU632_RS03090 lpdA dihydrolipoyl dehydrogenase 0.46 LU632_RS00125 sodA superoxide dismutase [Mn]
Escherichia coli ECRC100 0.37 OKFHMN_10490 lpdA dihydrolipoyl dehydrogenase 0.50 OKFHMN_27405 sodB superoxide dismutase [Fe]
Escherichia coli BL21 0.37 ECD_00115 dihydrolipoyl dehydrogenase; E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes; glycine cleavage system L protein; dihydrolipoamide dehydrogenase 0.50 ECD_01626 superoxide dismutase, Fe
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF120 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 0.51 GFF3619 Superoxide dismutase [Fe] (EC 1.15.1.1)
Escherichia coli ECRC102 0.37 NIAGMN_08340 lpdA dihydrolipoyl dehydrogenase 0.50 NIAGMN_00660 sodB superoxide dismutase [Fe]
Escherichia coli ECRC99 0.37 KEDOAH_17665 lpdA dihydrolipoyl dehydrogenase 0.50 KEDOAH_00705 sodB superoxide dismutase [Fe]
Escherichia fergusonii Becca 0.37 EFB2_03929 Dihydrolipoyl dehydrogenase 0.50 EFB2_02337 Superoxide dismutase [Fe]
Escherichia coli ECRC98 0.37 JDDGAC_14085 lpdA dihydrolipoyl dehydrogenase 0.50 JDDGAC_01995 sodB superoxide dismutase [Fe]
Escherichia coli ECOR38 0.37 HEPCGN_08470 lpdA dihydrolipoyl dehydrogenase 0.50 HEPCGN_05790 sodB superoxide dismutase [Fe]
Dickeya dianthicola 67-19 0.37 HGI48_RS17840 dihydrolipoyl dehydrogenase 0.43 HGI48_RS00285 superoxide dismutase [Mn]
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_03545 Dihydrolipoyl dehydrogenase 0.50 OHPLBJKB_02069 Superoxide dismutase [Fe]
Escherichia coli ECRC101 0.37 MCAODC_01005 lpdA dihydrolipoyl dehydrogenase 0.50 MCAODC_18005 sodB superoxide dismutase [Fe]
Escherichia coli BW25113 0.37 b0116 lpd dihydrolipoamide dehydrogenase (NCBI) 0.50 b1656 sodB superoxide dismutase, Fe (NCBI)
Enterobacter asburiae PDN3 0.37 EX28DRAFT_3712 dihydrolipoamide dehydrogenase 0.50 EX28DRAFT_1653 Superoxide dismutase
Escherichia coli ECOR27 0.37 NOLOHH_02835 lpdA dihydrolipoyl dehydrogenase 0.50 NOLOHH_17925 sodB superoxide dismutase [Fe]
Escherichia coli Nissle 1917 0.37 ECOLIN_RS00650 dihydrolipoyl dehydrogenase 0.50 ECOLIN_RS09230 superoxide dismutase [Fe]
Dickeya dadantii 3937 0.37 DDA3937_RS17915 dihydrolipoyl dehydrogenase 0.45 DDA3937_RS20960 superoxide dismutase [Mn]
Dickeya dianthicola ME23 0.37 DZA65_RS18990 dihydrolipoyl dehydrogenase 0.43 DZA65_RS00285 superoxide dismutase [Mn]
Enterobacter sp. TBS_079 0.36 MPMX20_00809 Dihydrolipoyl dehydrogenase 0.50 MPMX20_01981 Superoxide dismutase [Fe]
Klebsiella michiganensis M5al 0.36 BWI76_RS04890 dihydrolipoyl dehydrogenase 0.51 BWI76_RS16500 superoxide dismutase [Fe]
Escherichia coli ECRC62 0.36 BNILDI_08775 lpdA dihydrolipoyl dehydrogenase 0.50 BNILDI_16715 sodB superoxide dismutase [Fe]
Pantoea sp. MT58 0.36 IAI47_15800 dihydrolipoyl dehydrogenase 0.46 IAI47_18725 superoxide dismutase [Mn]
Serratia liquefaciens MT49 0.36 IAI46_21315 dihydrolipoyl dehydrogenase 0.48 IAI46_11250 superoxide dismutase [Fe]
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_12210 dihydrolipoyl dehydrogenase 0.48 CSW01_10230 superoxide dismutase [Fe]
Rahnella sp. WP5 0.35 EX31_RS03465 dihydrolipoyl dehydrogenase 0.44 EX31_RS05785 superoxide dismutase [Mn]
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_2146 dihydrolipoamide dehydrogenase 0.50 B158DRAFT_1215 Superoxide dismutase
Alteromonas macleodii MIT1002 0.35 MIT1002_03001 Dihydrolipoyl dehydrogenase 0.45 MIT1002_01234 Superoxide dismutase [Fe]
Desulfovibrio vulgaris Hildenborough JW710 0.24 DVU1423 lpdA 2-oxoglutarate dehydrogenase, E3 component, lipoamide dehydrogenase (TIGR) 0.42 DVU2410 sodB superoxide dismutase, Fe (TIGR) low > 55

Not shown: 2 genomes with orthologs for TX73_000960 only; 9 genomes with orthologs for TX73_008710 only