Conservation of cofitness between SM_b21009 and SMc00576 in Sinorhizobium meliloti 1021

89 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SM_b21009 Glycerol kinase (EC 2.7.1.30) (from data) 1.0 SMc00576 hypothetical protein 0.20 17
Rhizobium sp. OAE497 0.83 ABIE40_RS13710 glycerol kinase GlpK 0.74 ABIE40_RS06380 YicC/YloC family endoribonuclease low > 107
Agrobacterium fabrum C58 0.73 Atu3890 glycerol kinase 0.67 Atu1100 hypothetical protein low > 89
Dinoroseobacter shibae DFL-12 0.66 Dshi_3420 Glycerol kinase (EC 2.7.1.30) (from data) 0.31 Dshi_1528 domain of unknown function DUF1732 (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.66 PGA1_c32030 glycerol kinase GlpK 0.38 PGA1_c15840 TIGR00255 family protein low > 62
Bosea sp. OAE506 0.65 ABIE41_RS15215 glycerol kinase GlpK 0.46 ABIE41_RS17740 YicC/YloC family endoribonuclease low > 77
Rhodopseudomonas palustris CGA009 0.64 TX73_019190 glycerol kinase GlpK 0.44 TX73_015880 YicC family protein low > 86
Pseudomonas sp. S08-1 0.61 OH686_20375 glycerol kinase 0.26 OH686_13565 UPF0701 protein YicC low > 80
Azospirillum brasilense Sp245 0.60 AZOBR_RS25905 glycerol kinase 0.36 AZOBR_RS16330 hypothetical protein — —
Marinobacter adhaerens HP15 0.59 HP15_748 glycerol kinase 0.23 HP15_301 conserved hypothetical protein low > 73
Alteromonas macleodii MIT1002 0.59 MIT1002_00198 Glycerol kinase 0.26 MIT1002_04072 hypothetical protein low > 70
Azospirillum sp. SherDot2 0.58 MPMX19_05974 Glycerol kinase 0.37 MPMX19_00983 hypothetical protein — —
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS20035 glycerol kinase GlpK 0.24 ABZR86_RS11895 YicC/YloC family endoribonuclease low > 74
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.469.1 Glycerol kinase (EC 2.7.1.30) 0.23 Xcc-8004.1220.1 Protein YicC low > 74
Rahnella sp. WP5 0.54 EX31_RS14270 glycerol kinase GlpK 0.22 EX31_RS14510 YicC family protein low > 89
Fusobacterium nucleatum SB010 0.54 HUW76_01965 glycerol kinase GlpK 0.16 HUW76_10345 YicC family protein low > 35
Pedobacter sp. GW460-11-11-14-LB5 0.53 CA265_RS07870 glycerol kinase 0.16 CA265_RS18780 YicC family protein low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.53 Echvi_1770 glycerol kinase 0.15 Echvi_2830 TIGR00255 family protein low > 79
Parabacteroides merdae CL09T00C40 0.53 HMPREF1078_RS00735 glycerol kinase GlpK 0.17 HMPREF1078_RS10050 YicC family protein — —
Desulfovibrio vulgaris Hildenborough JW710 0.53 DVU3134 glpK glycerol kinase (TIGR) 0.19 DVU0898 conserved hypothetical protein (TIGR) low > 55
Escherichia fergusonii Becca 0.53 EFB2_04692 Glycerol kinase 0.24 EFB2_00169 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.53 ECOLIN_RS22610 glycerol kinase GlpK 0.24 ECOLIN_RS20760 YicC/YloC family endoribonuclease low > 52
Rhodospirillum rubrum S1H 0.53 Rru_A2009 Glycerol kinase (NCBI) 0.39 Rru_A0428 hypothetical protein (NCBI) — —
Shewanella amazonensis SB2B 0.53 Sama_0341 glycerol kinase (RefSeq) 0.26 Sama_0319 hypothetical protein (RefSeq) low > 62
Escherichia coli ECOR38 0.53 HEPCGN_12420 glpK glycerol kinase GlpK 0.24 HEPCGN_14405 yicC UPF0701 protein YicC low > 85
Escherichia coli ECRC101 0.53 OKFHMN_13775 glpK glycerol kinase GlpK 0.24 OKFHMN_15585 yicC UPF0701 protein YicC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_04125 Glycerol kinase 0.24 OHPLBJKB_00058 hypothetical protein 0.74 72
Escherichia coli ECOR27 0.53 NOLOHH_05910 glpK glycerol kinase GlpK 0.24 NOLOHH_07465 yicC UPF0701 protein YicC low > 57
Escherichia coli ECRC98 0.53 JDDGAC_17400 glpK glycerol kinase GlpK 0.24 JDDGAC_19210 yicC UPF0701 protein YicC — —
Variovorax sp. SCN45 0.53 GFF2679 Glycerol kinase (EC 2.7.1.30) 0.20 GFF2378 UPF0701 protein YicC — —
Escherichia coli ECRC99 0.53 KEDOAH_14385 glpK glycerol kinase GlpK 0.24 KEDOAH_12560 yicC UPF0701 protein YicC — —
Escherichia coli BW25113 0.53 b3926 glpK glycerol kinase (NCBI) 0.24 b3644 yicC hypothetical protein (NCBI) low > 76
Escherichia coli BL21 0.53 ECD_03811 glycerol kinase 0.24 ECD_03501 UPF0701 family protein low > 60
Escherichia coli ECRC102 0.53 NIAGMN_11530 glpK glycerol kinase GlpK 0.24 NIAGMN_13345 yicC UPF0701 protein YicC — —
Escherichia coli ECRC101 0.53 MCAODC_04275 glpK glycerol kinase GlpK 0.24 MCAODC_06095 yicC UPF0701 protein YicC — —
Escherichia coli ECRC62 0.53 BNILDI_05620 glpK glycerol kinase GlpK 0.24 BNILDI_04050 yicC UPF0701 protein YicC — —
Serratia liquefaciens MT49 0.53 IAI46_24600 glycerol kinase GlpK 0.25 IAI46_24855 YicC family protein low > 86
Pontibacter actiniarum KMM 6156, DSM 19842 0.53 CA264_11350 glycerol kinase 0.20 CA264_14585 YicC family protein low > 74
Klebsiella michiganensis M5al 0.53 BWI76_RS27515 glycerol kinase 0.26 BWI76_RS27395 hypothetical protein low > 92
Rhodanobacter denitrificans MT42 0.53 LRK55_RS06280 glycerol kinase GlpK 0.23 LRK55_RS11475 YicC family protein 0.70 53
Dickeya dianthicola ME23 0.53 DZA65_RS21530 glycerol kinase GlpK 0.25 DZA65_RS00575 YicC family protein low > 75
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS16495 glycerol kinase 0.24 BPHYT_RS15320 hypothetical protein low > 109
Enterobacter asburiae PDN3 0.53 EX28DRAFT_4399 glycerol kinase 0.23 EX28DRAFT_3894 TIGR00255 family protein low > 76
Dickeya dianthicola 67-19 0.52 HGI48_RS20485 glycerol kinase GlpK 0.25 HGI48_RS00540 YicC family protein low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF2307 Glycerol kinase (EC 2.7.1.30) 0.23 GFF365 Protein YicC low > 78
Dickeya dadantii 3937 0.52 DDA3937_RS00890 glycerol kinase GlpK 0.25 DDA3937_RS20645 YicC family protein low > 74
Desulfovibrio vulgaris Miyazaki F 0.52 DvMF_0809 glycerol kinase (RefSeq) 0.20 DvMF_1140 hypothetical protein (RefSeq) low > 51
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS02230 glycerol kinase GlpK 0.24 QEN71_RS03650 YicC/YloC family endoribonuclease low > 153
Enterobacter sp. TBS_079 0.52 MPMX20_04543 Glycerol kinase 0.24 MPMX20_00091 hypothetical protein low > 85
Erwinia tracheiphila SCR3 0.52 LU632_RS19705 glpK glycerol kinase GlpK 0.25 LU632_RS22050 YicC family protein low > 74
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS06535 glycerol kinase GlpK 0.23 LRK54_RS11750 YicC family protein low > 59
Pectobacterium carotovorum WPP14 0.52 HER17_RS00825 glycerol kinase GlpK 0.25 HER17_RS20905 YicC family protein low > 75
Castellaniella sp019104865 MT123 0.52 ABCV34_RS05865 glycerol kinase GlpK 0.20 ABCV34_RS03510 DUF1732 domain-containing protein low > 48
Pantoea sp. MT58 0.52 IAI47_00825 glycerol kinase GlpK 0.25 IAI47_00580 YicC family protein low > 76
Shewanella sp. ANA-3 0.52 Shewana3_3756 glycerol kinase (RefSeq) 0.27 Shewana3_3778 hypothetical protein (RefSeq) low > 73
Pseudomonas putida KT2440 0.52 PP_1075 glycerol kinase 0.26 PP_5295 conserved protein of unknown function low > 96
Variovorax sp. OAS795 0.52 ABID97_RS19965 glycerol kinase GlpK 0.19 ABID97_RS23655 YicC/YloC family endoribonuclease low > 91
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_18250 glycerol kinase 0.25 AO356_12495 hypothetical protein low > 104
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_04229 glycerol kinase 0.24 H281DRAFT_04007 TIGR00255 family protein low > 103
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_17900 glycerol kinase 0.25 CSW01_01110 YicC family protein low > 62
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_767 Glycerol kinase (EC 2.7.1.30) 0.25 Pf1N1B4_2116 Protein YicC — —
Acidovorax sp. GW101-3H11 0.51 Ac3H11_789 Glycerol kinase (EC 2.7.1.30) 0.21 Ac3H11_3667 Protein YicC — —
Paraburkholderia graminis OAS925 0.51 ABIE53_003469 glycerol kinase 0.23 ABIE53_003233 uncharacterized protein (TIGR00255 family) low > 113
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_1734 Glycerol kinase (EC 2.7.1.30) 0.25 PfGW456L13_783 Protein YicC low > 87
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_04180 glycerol kinase 0.25 AO353_09265 hypothetical protein low > 101
Ralstonia solanacearum UW163 0.51 UW163_RS06225 glycerol kinase 0.21 UW163_RS10390 YicC family protein — —
Shewanella oneidensis MR-1 0.51 SO4230 glpK glycerol kinase (NCBI ptt file) 0.26 SO4257 conserved hypothetical protein TIGR00255 (NCBI ptt file) low > 76
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS13810 glycerol kinase 0.22 RR42_RS04905 hypothetical protein — —
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS07395 glycerol kinase 0.21 RALBFv3_RS03330 YicC family protein low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_3905 glycerol kinase 0.24 Psyr_0212 Conserved hypothetical protein 255 low > 86
Pseudomonas simiae WCS417 0.51 PS417_05575 Glycerol kinase (EC 2.7.1.30) (from data) 0.25 PS417_27815 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_5574 Glycerol kinase (EC 2.7.1.30) 0.25 Pf6N2E2_4364 Protein YicC low > 103
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_3905 glycerol kinase 0.24 Psyr_0212 Conserved hypothetical protein 255 low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.51 GFF2807 Glycerol kinase (EC 2.7.1.30) 0.18 GFF3251 Protein YicC — —
Pseudomonas sp. RS175 0.51 PFR28_03368 Glycerol kinase 0.25 PFR28_04421 hypothetical protein — —
Ralstonia solanacearum GMI1000 0.51 RS_RS15335 glycerol kinase 0.21 RS_RS10815 YicC family protein — —
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS05660 glycerol kinase GlpK 0.24 PFLU_RS29495 YicC family protein low > 109
Ralstonia solanacearum PSI07 0.51 RPSI07_RS09850 glycerol kinase 0.21 RPSI07_RS13855 YicC family protein low > 81
Pseudomonas fluorescens SBW25 0.51 PFLU_RS05660 glycerol kinase GlpK 0.24 PFLU_RS29495 YicC family protein low > 109
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS03055 glycerol kinase GlpK 0.22 ABZR87_RS15240 YicC/YloC family endoribonuclease low > 80
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_00030 glpK glycerol kinase GlpK 0.24 OKGIIK_12145 yicC YicC-like family, N-terminal region — —
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS04875 glycerol kinase 0.26 HSERO_RS10650 hypothetical protein low > 78
Shewanella loihica PV-4 0.50 Shew_3466 glycerol kinase (RefSeq) 0.27 Shew_3489 hypothetical protein (RefSeq) low > 60
Pseudomonas stutzeri RCH2 0.50 Psest_2773 glycerol kinase 0.24 Psest_3814 TIGR00255 family protein — —
Caulobacter crescentus NA1000 0.48 CCNA_01281 glycerol kinase 0.38 CCNA_01752 YicC-family protein low > 66
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_01281 glycerol kinase 0.38 CCNA_01752 YicC-family protein low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS13260 glycerol kinase GlpK 0.33 A4249_RS06780 YicC family protein low > 48
Phocaeicola dorei CL03T12C01 0.40 ABI39_RS01980 glycerol kinase GlpK 0.18 ABI39_RS08135 YicC family protein low > 72
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS02700 glycerol kinase GlpK 0.18 HMPREF1058_RS00515 YicC family protein low > 67
Mucilaginibacter yixingensis YX-36 DSM 26809 0.35 ABZR88_RS15235 glycerol kinase GlpK 0.17 ABZR88_RS01665 YicC/YloC family endoribonuclease — —

Not shown: 3 genomes with orthologs for SM_b21009 only; 7 genomes with orthologs for SMc00576 only