| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Paraburkholderia sabiae LMG 24235 | 1.0 | QEN71_RS17655 | | tryptophan synthase subunit alpha | 1.0 | QEN71_RS04085 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.94 | 7 |
| Paraburkholderia graminis OAS925 | 0.88 | ABIE53_004811 | | tryptophan synthase alpha chain | 0.88 | ABIE53_003154 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.86 | H281DRAFT_06065 | | tryptophan synthase, alpha chain | 0.91 | H281DRAFT_03922 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Burkholderia phytofirmans PsJN | 0.84 | BPHYT_RS33865 | | tryptophan synthase alpha chain | 0.90 | BPHYT_RS14895 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.88 | 18 |
| Ralstonia solanacearum GMI1000 | 0.71 | RS_RS09955 | | tryptophan synthase subunit alpha | 0.70 | RS_RS04510 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.45 | 31 |
| Ralstonia solanacearum PSI07 | 0.71 | RPSI07_RS14740 | | tryptophan synthase subunit alpha | 0.69 | RPSI07_RS19695 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.71 | ABZR87_RS14490 | | tryptophan synthase subunit alpha | 0.71 | ABZR87_RS09465 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.91 | 4 |
| Ralstonia solanacearum UW163 | 0.70 | UW163_RS11150 | | tryptophan synthase subunit alpha | 0.69 | UW163_RS16035 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.70 | RALBFv3_RS02575 | | tryptophan synthase subunit alpha | 0.69 | RALBFv3_RS13775 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.70 | RR42_RS14350 | | tryptophan synthase alpha chain | 0.68 | RR42_RS04475 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.62 | HSERO_RS16470 | | tryptophan synthase subunit alpha | 0.63 | HSERO_RS18420 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.50 | ABZR86_RS07995 | | tryptophan synthase subunit alpha | 0.19 | ABZR86_RS02230 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.89 | 33 |
| Rhodanobacter denitrificans FW104-10B01 | 0.49 | LRK54_RS01680 | | tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data) | 0.16 | LRK54_RS00390 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Rhodanobacter denitrificans MT42 | 0.49 | LRK55_RS01460 | | tryptophan synthase subunit alpha | 0.18 | LRK55_RS00130 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.49 | OKGIIK_04850 | trpA | tryptophan synthase subunit alpha | 0.18 | OKGIIK_06920 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Lysobacter sp. OAE881 | 0.48 | ABIE51_RS08265 | | tryptophan synthase subunit alpha | 0.19 | ABIE51_RS12135 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.42 | Dshi_0952 | | tryptophan synthase, alpha subunit (RefSeq) | 0.13 | Dshi_1022 | | 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.42 | Xcc-8004.1967.1 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | 0.15 | Xcc-8004.3281.1 | | 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) | 0.86 | 30 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.41 | Psyr_0033 | | tryptophan synthase, alpha chain | 0.26 | Psyr_0888 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.41 | Psyr_0033 | | tryptophan synthase, alpha chain | 0.26 | Psyr_0888 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.41 | PGA1_c04930 | | tryptophan synthase alpha chain | 0.13 | PGA1_c04810 | | 3-phosphoshikimate 1-carboxyvinyltransferase AroA | — | — |
| Bosea sp. OAE506 | 0.40 | ABIE41_RS03930 | | tryptophan synthase subunit alpha | 0.14 | ABIE41_RS03910 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Rhodospirillum rubrum S1H | 0.40 | Rru_A3428 | | Tryptophan synthase (NCBI) | 0.12 | Rru_A0295 | | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | — | — |
| Magnetospirillum magneticum AMB-1 | 0.40 | AMB_RS20300 | | tryptophan synthase subunit alpha | 0.15 | AMB_RS21555 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Pseudomonas fluorescens SBW25 | 0.40 | PFLU_RS00175 | | tryptophan synthase subunit alpha | 0.22 | PFLU_RS13540 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.66 | 34 |
| Pseudomonas fluorescens SBW25-INTG | 0.40 | PFLU_RS00175 | | tryptophan synthase subunit alpha | 0.22 | PFLU_RS13540 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.27 | 52 |
| Pseudomonas simiae WCS417 | 0.40 | PS417_00180 | | tryptophan synthase subunit alpha | 0.22 | PS417_12855 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.66 | 20 |
| Sinorhizobium meliloti 1021 | 0.40 | SMc02765 | | tryptophan synthase subunit alpha | 0.17 | SMc00333 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Azospirillum brasilense Sp245 | 0.39 | AZOBR_RS00520 | | tryptophan synthase subunit alpha | 0.13 | AZOBR_RS03090 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.39 | TX73_000365 | | tryptophan synthase subunit alpha | 0.13 | TX73_000320 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Azospirillum sp. SherDot2 | 0.38 | MPMX19_02737 | | Tryptophan synthase alpha chain | 0.12 | MPMX19_02233 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Synechococcus elongatus PCC 7942 | 0.38 | Synpcc7942_0411 | trpA | tryptophan synthase subunit alpha | 0.16 | Synpcc7942_0232 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Agrobacterium fabrum C58 | 0.38 | Atu0019 | | tryptophan synthase alpha subunit | 0.23 | Atu0642 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.37 | A4249_RS11320 | | tryptophan synthase subunit alpha | 0.15 | A4249_RS10920 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Rhizobium sp. OAE497 | 0.37 | ABIE40_RS19340 | | tryptophan synthase subunit alpha | 0.25 | ABIE40_RS05420 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.36 | Ga0059261_0239 | | tryptophan synthase, alpha chain (EC 4.2.1.20) | 0.15 | Ga0059261_0167 | | 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.36 | CCNA_03657 | | tryptophan synthase alpha chain | 0.15 | CCNA_03704 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.36 | CCNA_03657 | | tryptophan synthase alpha chain | 0.15 | CCNA_03704 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Dickeya dianthicola ME23 | 0.32 | DZA65_RS10940 | | tryptophan synthase subunit alpha | 0.52 | DZA65_RS09995 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Dickeya dianthicola 67-19 | 0.32 | HGI48_RS10460 | | tryptophan synthase subunit alpha | 0.52 | HGI48_RS09685 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Dickeya dadantii 3937 | 0.31 | DDA3937_RS10460 | | tryptophan synthase subunit alpha | 0.52 | DDA3937_RS09675 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Serratia liquefaciens MT49 | 0.31 | IAI46_14045 | | tryptophan synthase subunit alpha | 0.54 | IAI46_08640 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 86 |
| Pantoea sp. MT58 | 0.31 | IAI47_09165 | | tryptophan synthase subunit alpha | 0.53 | IAI47_12860 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Shewanella sp. ANA-3 | 0.31 | Shewana3_1515 | trpA | tryptophan synthase subunit alpha (RefSeq) | 0.55 | Shewana3_1975 | | 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) | 0.94 | 9 |
| Shewanella oneidensis MR-1 | 0.30 | SO3024 | trpA | tryptophan synthase, alpha subunit (NCBI ptt file) | 0.55 | SO2404 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI ptt file) | 0.90 | 47 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.30 | GFF2726 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | 0.54 | GFF3665 | | 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) | low | > 78 |
| Pectobacterium carotovorum WPP14 | 0.30 | HER17_RS10940 | | tryptophan synthase subunit alpha | 0.51 | HER17_RS12285 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.91 | 47 |
| Vibrio cholerae E7946 ATCC 55056 | 0.30 | CSW01_05925 | | tryptophan synthase subunit alpha | 0.56 | CSW01_08705 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 62 |
| Enterobacter sp. TBS_079 | 0.30 | MPMX20_02514 | | Tryptophan synthase alpha chain | 0.55 | MPMX20_01567 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.84 | 39 |
| Desulfovibrio vulgaris Miyazaki F | 0.30 | DvMF_1740 | trpA | tryptophan synthase subunit alpha (RefSeq) | 0.30 | DvMF_1748 | | 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) | — | — |
| Klebsiella michiganensis M5al | 0.30 | BWI76_RS11840 | | tryptophan synthase subunit alpha | 0.54 | BWI76_RS09760 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.78 | 54 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.30 | DVU0471 | trpA | tryptophan synthase, alpha subunit (TIGR) | 0.27 | DVU0463 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase (TIGR) | — | — |
| Enterobacter asburiae PDN3 | 0.29 | EX28DRAFT_0932 | | tryptophan synthase, alpha chain (EC 4.2.1.20) | 0.55 | EX28DRAFT_2027 | | 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.29 | OHPLBJKB_02423 | | Tryptophan synthase alpha chain | 0.54 | OHPLBJKB_02760 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 73 |
| Escherichia coli BL21 | 0.29 | ECD_01234 | | tryptophan synthase, alpha subunit | 0.54 | ECD_00912 | | 5-enolpyruvylshikimate-3-phosphate synthetase | 0.60 | 34 |
| Escherichia coli Nissle 1917 | 0.29 | ECOLIN_RS07595 | | tryptophan synthase subunit alpha | 0.54 | ECOLIN_RS04810 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Escherichia coli BW25113 | 0.29 | b1260 | trpA | tryptophan synthase subunit alpha (NCBI) | 0.54 | b0908 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | 0.91 | 21 |
| Escherichia coli ECOR27 | 0.29 | NOLOHH_20335 | trpA | tryptophan synthase subunit alpha | 0.54 | NOLOHH_22045 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.91 | 11 |
| Escherichia coli ECRC62 | 0.29 | BNILDI_18480 | trpA | tryptophan synthase subunit alpha | 0.54 | BNILDI_20300 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.96 | 7 |
| Escherichia coli ECRC102 | 0.28 | NIAGMN_26845 | trpA | tryptophan synthase subunit alpha | 0.54 | NIAGMN_03205 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Escherichia fergusonii Becca | 0.28 | EFB2_02666 | | Tryptophan synthase alpha chain | 0.54 | EFB2_03156 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.28 | LU632_RS12775 | trpA | tryptophan synthase subunit alpha | 0.50 | LU632_RS09795 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 74 |
| Escherichia coli ECRC100 | 0.28 | OKFHMN_02675 | trpA | tryptophan synthase subunit alpha | 0.54 | OKFHMN_05485 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.87 | 21 |
| Shewanella amazonensis SB2B | 0.28 | Sama_2134 | trpA | tryptophan synthase subunit alpha (RefSeq) | 0.56 | Sama_1734 | | 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) | low | > 62 |
| Escherichia coli ECOR38 | 0.28 | HEPCGN_25515 | trpA | tryptophan synthase subunit alpha | 0.54 | HEPCGN_23035 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.95 | 7 |
| Escherichia coli ECRC101 | 0.28 | MCAODC_15590 | trpA | tryptophan synthase subunit alpha | 0.54 | MCAODC_24875 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.90 | 4 |
| Escherichia coli ECRC99 | 0.28 | KEDOAH_26075 | trpA | tryptophan synthase subunit alpha | 0.54 | KEDOAH_22250 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Escherichia coli ECRC98 | 0.28 | JDDGAC_05220 | trpA | tryptophan synthase subunit alpha | 0.54 | JDDGAC_09095 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.90 | 16 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.28 | ABZR88_RS10660 | | tryptophan synthase subunit alpha | 0.24 | ABZR88_RS07000 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Rahnella sp. WP5 | 0.28 | EX31_RS09980 | | tryptophan synthase subunit alpha | 0.54 | EX31_RS18250 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.28 | CA265_RS05025 | | tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data) | 0.23 | CA265_RS11640 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.28 | Echvi_2511 | | tryptophan synthase, alpha subunit | 0.26 | Echvi_0122 | | 5-enolpyruvylshikimate-3-phosphate synthase | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.28 | BT0527 | | tryptophan synthase alpha chain (NCBI ptt file) | 0.27 | BT2186 | | 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (from data) | — | — |
| Alteromonas macleodii MIT1002 | 0.27 | MIT1002_01425 | | Tryptophan synthase alpha chain | 0.53 | MIT1002_02191 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Methanococcus maripaludis JJ | 0.27 | MMJJ_RS09195 | | tryptophan synthase subunit alpha | 0.25 | MMJJ_RS08145 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Methanococcus maripaludis S2 | 0.27 | MMP_RS05185 | | tryptophan synthase subunit alpha | 0.24 | MMP_RS06205 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Bacteroides ovatus ATCC 8483 | 0.27 | BACOVA_03785 | | tryptophan synthase, alpha subunit | 0.27 | BACOVA_03157 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Parabacteroides merdae CL09T00C40 | 0.27 | HMPREF1078_RS00120 | | tryptophan synthase subunit alpha | 0.26 | HMPREF1078_RS05635 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Shewanella loihica PV-4 | 0.27 | Shew_2256 | trpA | tryptophan synthase subunit alpha (RefSeq) | 0.55 | Shew_1952 | | 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) | low | > 60 |
| Mycobacterium tuberculosis H37Rv | 0.27 | Rv1613 | | Probable tryptophan synthase, alpha subunit TrpA | 0.17 | Rv3227 | | 3-phosphoshikimate 1-carboxyvinyltransferase AroA (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) | — | — |
| Bacteroides stercoris CC31F | 0.26 | HMPREF1181_RS15350 | | tryptophan synthase subunit alpha | 0.25 | HMPREF1181_RS09330 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 56 |
| Phocaeicola vulgatus CL09T03C04 | 0.26 | HMPREF1058_RS07200 | | tryptophan synthase subunit alpha | 0.26 | HMPREF1058_RS13970 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.26 | ABI39_RS21075 | | tryptophan synthase subunit alpha | 0.26 | ABI39_RS09575 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.61 | 54 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.26 | CA264_05085 | | tryptophan synthase subunit alpha | 0.22 | CA264_13100 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 74 |
| Kangiella aquimarina DSM 16071 | 0.24 | B158DRAFT_2430 | | tryptophan synthase, alpha chain (EC 4.2.1.20) | 0.20 | B158DRAFT_2432 | | 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) | 0.80 | 2 |
| Bifidobacterium breve UCC2003 | 0.22 | BBR_RS15810 | | tryptophan synthase subunit alpha | 0.17 | BBR_RS14370 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 34 |
Not shown: 17 genomes with orthologs for QEN71_RS17655 only; 1 genomes with orthologs for QEN71_RS04085 only