Conservation of cofitness between PP_4679 and PP_0966 in Pseudomonas putida KT2440

85 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4679 acetohydroxybutanoate synthase / acetolactate synthase 1.0 PP_0966 Histidinol dehydrogenase 0.91 5
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0847 acetolactate synthase, small subunit 0.89 Psyr_4133 histidinol dehydrogenase 0.89 2
Pseudomonas syringae pv. syringae B728a 1.00 Psyr_0847 acetolactate synthase, small subunit 0.89 Psyr_4133 histidinol dehydrogenase 0.95 4
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS25645 acetolactate synthase small subunit 0.92 PFLU_RS04470 histidinol dehydrogenase 0.43 19
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_2879 Acetolactate synthase small subunit (EC 2.2.1.6) 0.92 Pf1N1B4_1066 Histidinol dehydrogenase (EC 1.1.1.23)
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_5176 Acetolactate synthase small subunit (EC 2.2.1.6) 0.90 Pf6N2E2_3252 Histidinol dehydrogenase (EC 1.1.1.23) 0.78 32
Pseudomonas sp. RS175 0.98 PFR28_03698 Acetolactate synthase isozyme 3 small subunit 0.90 PFR28_00187 Histidinol dehydrogenase 0.67 4
Pseudomonas fluorescens SBW25 0.98 PFLU_RS25645 acetolactate synthase small subunit 0.92 PFLU_RS04470 histidinol dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_14500 acetolactate synthase 3 regulatory subunit 0.92 AO353_05110 histidinol dehydrogenase 0.83 27
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_16175 acetolactate synthase 3 regulatory subunit 0.90 AO356_06965 histidinol dehydrogenase 0.89 31
Pseudomonas simiae WCS417 0.98 PS417_23805 acetolactate synthase 3 regulatory subunit 0.91 PS417_04420 histidinol dehydrogenase 0.90 9
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_1539 Acetolactate synthase small subunit (EC 2.2.1.6) 0.91 PfGW456L13_5000 Histidinol dehydrogenase (EC 1.1.1.23) 0.85 22
Pseudomonas sp. S08-1 0.98 OH686_08125 acetolactate synthase, small subunit 0.85 OH686_08470 Histidinol dehydrogenase 0.83 16
Pseudomonas stutzeri RCH2 0.97 Psest_1037 acetolactate synthase, small subunit 0.85 Psest_3298 histidinol dehydrogenase 0.80 6
Marinobacter adhaerens HP15 0.85 HP15_532 acetolactate synthase 3 regulatory subunit 0.70 HP15_2428 histidinol dehydrogenase 0.75 21
Acinetobacter radioresistens SK82 0.78 MPMX26_00473 Acetolactate synthase isozyme 3 small subunit 0.57 MPMX26_02587 Histidinol dehydrogenase 0.83 28
Paraburkholderia graminis OAS925 0.74 ABIE53_001575 acetolactate synthase-1/3 small subunit 0.62 ABIE53_003701 histidinol dehydrogenase
Ralstonia sp. UNC404CL21Col 0.74 ABZR87_RS14950 acetolactate synthase small subunit 0.62 ABZR87_RS02500 histidinol dehydrogenase
Burkholderia phytofirmans PsJN 0.74 BPHYT_RS06550 acetolactate synthase 0.63 BPHYT_RS17710 histidinol dehydrogenase
Cupriavidus basilensis FW507-4G11 0.74 RR42_RS05440 acetolactate synthase 0.66 RR42_RS18915 histidinol dehydrogenase
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_04552 acetolactate synthase, small subunit 0.62 H281DRAFT_05652 histidinol dehydrogenase
Ralstonia solanacearum GMI1000 0.73 RS_RS10415 acetolactate synthase small subunit 0.62 RS_RS14790 histidinol dehydrogenase
Paraburkholderia sabiae LMG 24235 0.73 QEN71_RS24220 acetolactate synthase small subunit 0.62 QEN71_RS27865 histidinol dehydrogenase low > 153
Ralstonia solanacearum PSI07 0.73 RPSI07_RS14260 acetolactate synthase small subunit 0.63 RPSI07_RS10390 histidinol dehydrogenase
Ralstonia solanacearum IBSBF1503 0.73 RALBFv3_RS03045 acetolactate synthase small subunit 0.62 RALBFv3_RS06845 histidinol dehydrogenase
Ralstonia solanacearum UW163 0.73 UW163_RS10680 acetolactate synthase small subunit 0.62 UW163_RS06770 histidinol dehydrogenase
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS08655 acetolactate synthase 0.63 HSERO_RS20345 histidinol dehydrogenase 0.67 34
Hydrogenophaga sp. GW460-11-11-14-LB1 0.71 GFF4277 Acetolactate synthase small subunit (EC 2.2.1.6) 0.62 GFF1314 Histidinol dehydrogenase (EC 1.1.1.23)
Acidovorax sp. GW101-3H11 0.71 Ac3H11_526 Acetolactate synthase small subunit (EC 2.2.1.6) 0.63 Ac3H11_4724 Histidinol dehydrogenase (EC 1.1.1.23)
Pectobacterium carotovorum WPP14 0.70 HER17_RS03100 acetolactate synthase small subunit 0.31 HER17_RS12230 histidinol dehydrogenase low > 75
Serratia liquefaciens MT49 0.70 IAI46_03380 acetolactate synthase small subunit 0.30 IAI46_08210 histidinol dehydrogenase low > 86
Rahnella sp. WP5 0.70 EX31_RS03660 acetolactate synthase small subunit 0.32 EX31_RS11440 histidinol dehydrogenase 0.62 36
Variovorax sp. OAS795 0.69 ABID97_RS14890 acetolactate synthase small subunit 0.64 ABID97_RS23160 histidinol dehydrogenase
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_12560 acetolactate synthase small subunit 0.34 CSW01_05750 histidinol dehydrogenase low > 62
Escherichia coli Nissle 1917 0.69 ECOLIN_RS00420 acetolactate synthase small subunit 0.32 ECOLIN_RS11945 histidinol dehydrogenase
Escherichia coli ECOR27 0.69 NOLOHH_03040 ilvN acetolactate synthase small subunit 0.32 NOLOHH_15830 hisD Histidinol dehydrogenase low > 57
Shewanella loihica PV-4 0.69 Shew_1775 acetolactate synthase 3 regulatory subunit (RefSeq) 0.33 Shew_2198 histidinol dehydrogenase (RefSeq) low > 60
Escherichia coli ECRC62 0.69 BNILDI_08570 ilvN acetolactate synthase small subunit 0.31 BNILDI_14740 hisD Histidinol dehydrogenase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.69 OHPLBJKB_03580 Acetolactate synthase isozyme 3 small subunit 0.32 OHPLBJKB_01680 Histidinol dehydrogenase low > 73
Escherichia fergusonii Becca 0.69 EFB2_03968 Acetolactate synthase isozyme 3 small subunit 0.32 EFB2_01836 Histidinol dehydrogenase low > 86
Escherichia coli ECRC99 0.68 KEDOAH_17460 ilvN acetolactate synthase small subunit 0.32 KEDOAH_03635 hisD Histidinol dehydrogenase
Dickeya dadantii 3937 0.68 DDA3937_RS18100 acetolactate synthase small subunit 0.33 DDA3937_RS09735 histidinol dehydrogenase low > 74
Escherichia coli ECRC101 0.68 MCAODC_01210 ilvN acetolactate synthase small subunit 0.32 MCAODC_20425 hisD Histidinol dehydrogenase
Escherichia coli ECRC98 0.68 JDDGAC_14290 ilvN acetolactate synthase small subunit 0.32 JDDGAC_28625 hisD Histidinol dehydrogenase
Escherichia coli ECRC102 0.68 NIAGMN_08545 ilvN acetolactate synthase small subunit 0.32 NIAGMN_22460 hisD Histidinol dehydrogenase
Klebsiella michiganensis M5al 0.68 BWI76_RS04700 acetolactate synthase small subunit 0.31 BWI76_RS18925 histidinol dehydrogenase low > 92
Variovorax sp. SCN45 0.68 GFF1159 Acetolactate synthase small subunit (EC 2.2.1.6) 0.64 GFF5345 Histidinol dehydrogenase (EC 1.1.1.23)
Escherichia coli ECRC101 0.68 OKFHMN_10695 ilvN acetolactate synthase small subunit 0.32 OKFHMN_24515 hisD Histidinol dehydrogenase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF160 Acetolactate synthase small subunit (EC 2.2.1.6) 0.32 GFF3912 Histidinol dehydrogenase (EC 1.1.1.23) low > 78
Escherichia coli ECOR38 0.68 HEPCGN_08675 ilvN acetolactate synthase small subunit 0.32 HEPCGN_03220 hisD Histidinol dehydrogenase low > 85
Enterobacter sp. TBS_079 0.68 MPMX20_00772 Acetolactate synthase isozyme 3 small subunit 0.31 MPMX20_03002 Histidinol dehydrogenase low > 85
Escherichia coli BW25113 0.68 b0078 ilvH acetolactate synthase small subunit (NCBI) 0.32 b2020 hisD histidinol dehydrogenase (NCBI) 0.78 3
Dickeya dianthicola ME23 0.68 DZA65_RS19180 acetolactate synthase small subunit 0.32 DZA65_RS10055 histidinol dehydrogenase low > 75
Dickeya dianthicola 67-19 0.68 HGI48_RS18035 acetolactate synthase small subunit 0.32 HGI48_RS09745 histidinol dehydrogenase low > 71
Escherichia coli BL21 0.68 ECD_00080 acetolactate synthase 3, small subunit, valine-sensitive 0.32 ECD_01922 bifunctional histidinal dehydrogenase/ histidinol dehydrogenase low > 60
Enterobacter asburiae PDN3 0.67 EX28DRAFT_3674 acetolactate synthase, small subunit (EC 2.2.1.6) 0.31 EX28DRAFT_0539 histidinol dehydrogenase low > 76
Pantoea sp. MT58 0.67 IAI47_15985 acetolactate synthase small subunit 0.30 IAI47_07090 histidinol dehydrogenase 0.65 21
Erwinia tracheiphila SCR3 0.67 LU632_RS02890 ilvN acetolactate synthase small subunit 0.31 LU632_RS08945 hisD histidinol dehydrogenase low > 74
Shewanella sp. ANA-3 0.66 Shewana3_2270 ilvH acetolactate synthase 3 regulatory subunit (RefSeq) 0.33 Shewana3_1853 hisD histidinol dehydrogenase (RefSeq) 0.58 31
Shewanella amazonensis SB2B 0.66 Sama_2019 ilvH acetolactate synthase 3 regulatory subunit (RefSeq) 0.33 Sama_1942 hisD histidinol dehydrogenase (RefSeq) 0.46 47
Shewanella oneidensis MR-1 0.66 SO2278 ilvH acetolactate synthase III, small subunit (NCBI ptt file) 0.32 SO2073 hisD histidinol dehydrogenase (NCBI ptt file)
Dechlorosoma suillum PS 0.66 Dsui_3528 acetolactate synthase, small subunit 0.63 Dsui_1411 histidinol dehydrogenase
Castellaniella sp019104865 MT123 0.66 ABCV34_RS01215 acetolactate synthase small subunit 0.56 ABCV34_RS11230 histidinol dehydrogenase low > 48
Alteromonas macleodii MIT1002 0.63 MIT1002_00504 Acetolactate synthase isozyme 3 small subunit 0.32 MIT1002_02633 Histidinol dehydrogenase 0.95 40
Desulfovibrio vulgaris Miyazaki F 0.46 DvMF_0154 ilvH acetolactate synthase 3 regulatory subunit (RefSeq) 0.39 DvMF_2814 hisD histidinol dehydrogenase (RefSeq) low > 51
Sphingomonas koreensis DSMZ 15582 0.45 Ga0059261_0067 acetolactate synthase, small subunit (EC 2.2.1.6) 0.44 Ga0059261_1281 histidinol dehydrogenase 0.97 25
Methanococcus maripaludis S2 0.45 MMP_RS03420 acetolactate synthase small subunit 0.35 MMP_RS05015 histidinol dehydrogenase
Desulfovibrio vulgaris Hildenborough JW710 0.45 DVU1377 ilvN-2 acetolactate synthase, small subunit (TIGR) 0.41 DVU0796 hisD histidinol dehydrogenase (TIGR) 0.40 21
Methanococcus maripaludis JJ 0.45 MMJJ_RS01645 acetolactate synthase small subunit 0.35 MMJJ_RS00120 histidinol dehydrogenase
Magnetospirillum magneticum AMB-1 0.43 AMB_RS17745 acetolactate synthase small subunit 0.46 AMB_RS16905 histidinol dehydrogenase
Azospirillum sp. SherDot2 0.42 MPMX19_01775 Acetolactate synthase isozyme 3 small subunit 0.44 MPMX19_05543 Histidinol dehydrogenase
Rhodospirillum rubrum S1H 0.42 Rru_A0468 Acetolactate synthase, small subunit (NCBI) 0.47 Rru_A2771 Histidinol dehydrogenase (NCBI) 0.64 41
Bifidobacterium breve UCC2003 0.42 BBR_RS12345 acetolactate synthase small subunit 0.31 BBR_RS17055 histidinol dehydrogenase 0.31 25
Rhodopseudomonas palustris CGA009 0.41 TX73_010470 acetolactate synthase small subunit 0.43 TX73_023540 histidinol dehydrogenase
Phaeobacter inhibens DSM 17395 0.41 PGA1_c20220 acetolactate synthase isozyme 3 small subunit 0.46 PGA1_c31190 histidinol dehydrogenase HisD
Synechococcus elongatus PCC 7942 0.40 Synpcc7942_2434 ilvH acetolactate synthase 3 regulatory subunit 0.42 Synpcc7942_1519 hisD histidinol dehydrogenase
Rhizobium sp. OAE497 0.40 ABIE40_RS11490 acetolactate synthase small subunit 0.45 ABIE40_RS02725 histidinol dehydrogenase 0.61 47
Sinorhizobium meliloti 1021 0.40 SMc01430 acetolactate synthase 3 regulatory subunit 0.47 SMc02307 histidinol dehydrogenase 0.73 63
Agrobacterium fabrum C58 0.40 Atu2035 acetolactate synthase, small subunit 0.44 Atu0537 histidinol dehydrogenase 0.35 21
Mycobacterium tuberculosis H37Rv 0.39 Rv3002c Probable acetolactate synthase (small subunit) IlvN (acetohydroxy-acid synthase) (AHAS) (ALS) 0.28 Rv1599 Probable histidinol dehydrogenase HisD (HDH)
Bosea sp. OAE506 0.38 ABIE41_RS12905 acetolactate synthase small subunit 0.45 ABIE41_RS24015 histidinol dehydrogenase
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_02186 acetolactate synthase small subunit 0.38 CCNA_02431 histidinol dehydrogenase low > 67
Caulobacter crescentus NA1000 0.38 CCNA_02186 acetolactate synthase small subunit 0.38 CCNA_02431 histidinol dehydrogenase low > 66
Dinoroseobacter shibae DFL-12 0.38 Dshi_1781 acetolactate synthase, small subunit (RefSeq) 0.45 Dshi_0979 Histidinol dehydrogenase (RefSeq)
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_2057 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data) 0.30 Echvi_2459 histidinol dehydrogenase 0.87 35
Parabacteroides merdae CL09T00C40 0.17 HMPREF1078_RS16685 acetolactate synthase small subunit 0.31 HMPREF1078_RS02450 histidinol dehydrogenase low > 61

Not shown: 1 genomes with orthologs for PP_4679 only; 16 genomes with orthologs for PP_0966 only