| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_1242 | | tRNA-guanine transglycosylase, queuosine-34-forming | 1.0 | Psest_0677 | | iron-sulfur cluster binding protein, putative | 0.26 | 13 |
| Pseudomonas sp. S08-1 | 0.93 | OH686_17430 | | tRNA-guanine transglycosylase | 0.82 | OH686_09500 | | epoxyqueuosine reductase | low | > 80 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.92 | Psyr_1228 | | tRNA-guanine transglycosylase | 0.81 | Psyr_0566 | | 4Fe-4S cluster binding protein | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.92 | PfGW456L13_4882 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.79 | PfGW456L13_160 | | Epoxyqueuosine (oQ) reductase QueG | 0.54 | 15 |
| Pseudomonas syringae pv. syringae B728a | 0.92 | Psyr_1228 | | tRNA-guanine transglycosylase | 0.81 | Psyr_0566 | | 4Fe-4S cluster binding protein | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.92 | AO353_15790 | | queuine tRNA-ribosyltransferase | 0.80 | AO353_13115 | | epoxyqueuosine reductase | — | — |
| Pseudomonas sp. RS175 | 0.92 | PFR28_00277 | | Queuine tRNA-ribosyltransferase | 0.80 | PFR28_05115 | | Epoxyqueuosine reductase | 0.39 | 2 |
| Pseudomonas fluorescens FW300-N1B4 | 0.91 | Pf1N1B4_3006 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.80 | Pf1N1B4_1418 | | Epoxyqueuosine (oQ) reductase QueG | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.91 | Pf6N2E2_3198 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.80 | Pf6N2E2_3620 | | Epoxyqueuosine (oQ) reductase QueG | 0.29 | 83 |
| Pseudomonas fluorescens FW300-N2C3 | 0.91 | AO356_06690 | | queuine tRNA-ribosyltransferase | 0.81 | AO356_08685 | | epoxyqueuosine reductase | low | > 104 |
| Pseudomonas fluorescens SBW25-INTG | 0.90 | PFLU_RS24900 | | tRNA guanosine(34) transglycosylase Tgt | 0.79 | PFLU_RS02540 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.90 | PFLU_RS24900 | | tRNA guanosine(34) transglycosylase Tgt | 0.79 | PFLU_RS02540 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 109 |
| Pseudomonas simiae WCS417 | 0.90 | PS417_23245 | | queuine tRNA-ribosyltransferase | 0.80 | PS417_02460 | | epoxyqueuosine reductase | — | — |
| Pseudomonas putida KT2440 | 0.89 | PP_0833 | | queuine tRNA-ribosyltransferase | 0.78 | PP_4900 | | epoxyqueuosine reductase | 0.27 | 43 |
| Marinobacter adhaerens HP15 | 0.78 | HP15_1479 | | queuine tRNA-ribosyltransferase | 0.68 | HP15_2505 | | iron-sulfur cluster binding protein | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.75 | MIT1002_02813 | | Queuine tRNA-ribosyltransferase | 0.59 | MIT1002_03794 | | Epoxyqueuosine reductase | low | > 70 |
| Kangiella aquimarina DSM 16071 | 0.74 | B158DRAFT_2516 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.49 | B158DRAFT_0486 | | iron-sulfur cluster binding protein, putative | low | > 40 |
| Serratia liquefaciens MT49 | 0.74 | IAI46_04840 | | tRNA guanosine(34) transglycosylase Tgt | 0.57 | IAI46_01595 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.73 | GFF4305 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.58 | GFF819 | | Epoxyqueuosine (oQ) reductase QueG | low | > 78 |
| Enterobacter asburiae PDN3 | 0.73 | EX28DRAFT_2565 | | tRNA-guanine transglycosylase | 0.57 | EX28DRAFT_3363 | | epoxyqueuosine reductase | low | > 76 |
| Rahnella sp. WP5 | 0.73 | EX31_RS22095 | | tRNA guanosine(34) transglycosylase Tgt | 0.56 | EX31_RS08850 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 89 |
| Enterobacter sp. TBS_079 | 0.73 | MPMX20_00997 | | Queuine tRNA-ribosyltransferase | 0.57 | MPMX20_00447 | | Epoxyqueuosine reductase | low | > 85 |
| Klebsiella michiganensis M5al | 0.73 | BWI76_RS06300 | | tRNA guanosine(34) transglycosylase Tgt | 0.57 | BWI76_RS02505 | | tRNA epoxyqueuosine(34) reductase QueG | — | — |
| Shewanella amazonensis SB2B | 0.73 | Sama_2193 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.53 | Sama_2625 | | iron-sulfur cluster-binding protein (RefSeq) | 0.45 | 22 |
| Shewanella sp. ANA-3 | 0.73 | Shewana3_1435 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.55 | Shewana3_0745 | | putative iron-sulfur cluster binding protein (RefSeq) | low | > 73 |
| Acinetobacter radioresistens SK82 | 0.73 | MPMX26_00438 | | Queuine tRNA-ribosyltransferase | 0.50 | MPMX26_01783 | | Epoxyqueuosine reductase | low | > 36 |
| Dickeya dadantii 3937 | 0.73 | DDA3937_RS05470 | | tRNA guanosine(34) transglycosylase Tgt | 0.57 | DDA3937_RS18645 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 74 |
| Dickeya dianthicola ME23 | 0.72 | DZA65_RS05855 | | tRNA guanosine(34) transglycosylase Tgt | 0.56 | DZA65_RS19710 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 75 |
| Dickeya dianthicola 67-19 | 0.72 | HGI48_RS05530 | | tRNA guanosine(34) transglycosylase Tgt | 0.56 | HGI48_RS18575 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 71 |
| Shewanella oneidensis MR-1 | 0.72 | SO3113 | tgt | queuine tRNA-ribosyltransferase (NCBI ptt file) | 0.55 | SO3861 | | iron-sulfur cluster-binding protein (NCBI ptt file) | 0.42 | 29 |
| Escherichia coli ECOR27 | 0.72 | NOLOHH_01440 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.59 | NOLOHH_04550 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 57 |
| Shewanella loihica PV-4 | 0.72 | Shew_2337 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.55 | Shew_2979 | | putative iron-sulfur cluster binding protein (RefSeq) | low | > 60 |
| Escherichia coli ECRC62 | 0.72 | BNILDI_22855 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.59 | BNILDI_06940 | queG | tRNA epoxyqueuosine(34) reductase QueG | — | — |
| Escherichia coli Nissle 1917 | 0.72 | ECOLIN_RS02445 | | tRNA guanosine(34) transglycosylase Tgt | 0.58 | ECOLIN_RS24200 | | tRNA epoxyqueuosine(34) reductase QueG | — | — |
| Escherichia coli ECRC101 | 0.72 | OKFHMN_08505 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.59 | OKFHMN_12285 | queG | tRNA epoxyqueuosine(34) reductase QueG | — | — |
| Escherichia coli BW25113 | 0.72 | b0406 | tgt | queuine tRNA-ribosyltransferase (NCBI) | 0.59 | b4166 | yjeS | predicted Fe-S electron transport protein (NCBI) | 0.39 | 5 |
| Escherichia coli BL21 | 0.72 | ECD_00354 | | tRNA-guanine transglycosylase | 0.59 | ECD_04033 | | epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis | low | > 60 |
| Escherichia coli ECRC99 | 0.72 | KEDOAH_19460 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.59 | KEDOAH_15870 | queG | tRNA epoxyqueuosine(34) reductase QueG | — | — |
| Escherichia coli ECOR38 | 0.72 | HEPCGN_07145 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.59 | HEPCGN_10515 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 85 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.72 | OHPLBJKB_03270 | | Queuine tRNA-ribosyltransferase | 0.59 | OHPLBJKB_03876 | | Epoxyqueuosine reductase | low | > 73 |
| Escherichia fergusonii Becca | 0.72 | EFB2_03651 | | Queuine tRNA-ribosyltransferase | 0.58 | EFB2_04369 | | Epoxyqueuosine reductase | low | > 86 |
| Escherichia coli ECRC102 | 0.72 | NIAGMN_06560 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.59 | NIAGMN_10135 | queG | tRNA epoxyqueuosine(34) reductase QueG | — | — |
| Escherichia coli ECRC98 | 0.72 | JDDGAC_12160 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.59 | JDDGAC_15925 | queG | tRNA epoxyqueuosine(34) reductase QueG | — | — |
| Escherichia coli ECRC101 | 0.72 | MCAODC_27730 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.58 | MCAODC_02800 | queG | tRNA epoxyqueuosine(34) reductase QueG | — | — |
| Pectobacterium carotovorum WPP14 | 0.72 | HER17_RS15990 | | tRNA guanosine(34) transglycosylase Tgt | 0.58 | HER17_RS02555 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.71 | CSW01_03850 | | tRNA guanosine(34) transglycosylase Tgt | 0.60 | CSW01_01810 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 62 |
| Pantoea sp. MT58 | 0.71 | IAI47_14805 | | tRNA guanosine(34) transglycosylase Tgt | 0.58 | IAI47_02560 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 76 |
| Lysobacter sp. OAE881 | 0.69 | ABIE51_RS15020 | | tRNA guanosine(34) transglycosylase Tgt | 0.59 | ABIE51_RS08045 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 62 |
| Dechlorosoma suillum PS | 0.68 | Dsui_3323 | | tRNA-guanine transglycosylase, queuosine-34-forming | 0.50 | Dsui_3502 | | iron-sulfur cluster binding protein, putative | low | > 51 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.67 | Xcc-8004.2168.1 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.61 | Xcc-8004.2252.1 | | Epoxyqueuosine (oQ) reductase QueG | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.65 | ABZR86_RS09540 | | tRNA guanosine(34) transglycosylase Tgt | 0.63 | ABZR86_RS00835 | | tRNA epoxyqueuosine(34) reductase QueG | 0.75 | 8 |
| Rhodanobacter denitrificans MT42 | 0.65 | LRK55_RS02880 | | tRNA guanosine(34) transglycosylase Tgt | 0.61 | LRK55_RS14845 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.65 | LRK54_RS03130 | | tRNA guanosine(34) transglycosylase Tgt | 0.61 | LRK54_RS15130 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.65 | OKGIIK_10000 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.62 | OKGIIK_03900 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 52 |
| Herbaspirillum seropedicae SmR1 | 0.64 | HSERO_RS06175 | | queuine tRNA-ribosyltransferase | 0.57 | HSERO_RS04220 | | epoxyqueuosine reductase | 0.30 | 37 |
| Castellaniella sp019104865 MT123 | 0.64 | ABCV34_RS15365 | | tRNA guanosine(34) transglycosylase Tgt | 0.51 | ABCV34_RS13905 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 48 |
| Cupriavidus basilensis FW507-4G11 | 0.62 | RR42_RS17400 | | queuine tRNA-ribosyltransferase | 0.54 | RR42_RS03405 | | epoxyqueuosine reductase | low | > 128 |
| Paraburkholderia sabiae LMG 24235 | 0.61 | QEN71_RS26640 | | tRNA guanosine(34) transglycosylase Tgt | 0.55 | QEN71_RS02745 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 153 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.61 | GFF2798 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.57 | GFF5474 | | Epoxyqueuosine (oQ) reductase QueG | low | > 90 |
| Ralstonia sp. UNC404CL21Col | 0.61 | ABZR87_RS01280 | | tRNA guanosine(34) transglycosylase Tgt | 0.54 | ABZR87_RS00775 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 80 |
| Burkholderia phytofirmans PsJN | 0.60 | BPHYT_RS03410 | | queuine tRNA-ribosyltransferase | 0.55 | BPHYT_RS15960 | | iron-sulfur cluster binding protein | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.60 | H281DRAFT_04670 | | tRNA-guanine transglycosylase | 0.55 | H281DRAFT_04128 | | epoxyqueuosine reductase | low | > 103 |
| Ralstonia solanacearum GMI1000 | 0.60 | RS_RS13575 | | tRNA guanosine(34) transglycosylase Tgt | 0.53 | RS_RS12740 | | tRNA epoxyqueuosine(34) reductase QueG | 0.49 | 20 |
| Acidovorax sp. GW101-3H11 | 0.60 | Ac3H11_861 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.54 | Ac3H11_306 | | Epoxyqueuosine (oQ) reductase QueG | 0.43 | 26 |
| Ralstonia solanacearum IBSBF1503 | 0.59 | RALBFv3_RS05685 | | tRNA guanosine(34) transglycosylase Tgt | 0.54 | RALBFv3_RS05120 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 76 |
| Ralstonia solanacearum UW163 | 0.59 | UW163_RS07940 | | tRNA guanosine(34) transglycosylase Tgt | 0.54 | UW163_RS08505 | | tRNA epoxyqueuosine(34) reductase QueG | — | — |
| Variovorax sp. SCN45 | 0.59 | GFF5534 | | Queuine tRNA-ribosyltransferase (EC 2.4.2.29) | 0.52 | GFF4805 | | Epoxyqueuosine reductase (EC 1.17.99.6) QueG | low | > 127 |
| Variovorax sp. OAS795 | 0.59 | ABID97_RS01595 | | tRNA guanosine(34) transglycosylase Tgt | 0.56 | ABID97_RS20285 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 91 |
| Ralstonia solanacearum PSI07 | 0.58 | RPSI07_RS11615 | | tRNA guanosine(34) transglycosylase Tgt | 0.54 | RPSI07_RS12175 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 81 |
| Rhodospirillum rubrum S1H | 0.54 | Rru_A0280 | | Queuine tRNA-ribosyltransferase (NCBI) | 0.36 | Rru_A0279 | | 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) | low | > 58 |
| Phaeobacter inhibens DSM 17395 | 0.54 | PGA1_c20570 | | queuine tRNA-ribosyltransferase Tgt | 0.33 | PGA1_c34310 | | Uncharacterized Fe-S protein | 0.40 | 7 |
| Dinoroseobacter shibae DFL-12 | 0.53 | Dshi_2346 | | queuine tRNA-ribosyltransferase (RefSeq) | 0.34 | Dshi_3307 | | domain of unknown function DUF1730 (RefSeq) | low | > 64 |
| Magnetospirillum magneticum AMB-1 | 0.52 | AMB_RS03090 | | tRNA guanosine(34) transglycosylase Tgt | 0.36 | AMB_RS03995 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 64 |
| Sphingomonas koreensis DSMZ 15582 | 0.51 | Ga0059261_1017 | | tRNA-guanine transglycosylase | 0.33 | Ga0059261_1058 | | epoxyqueuosine reductase | 0.37 | 34 |
| Sinorhizobium meliloti 1021 | 0.51 | SMc01206 | | queuine tRNA-ribosyltransferase | 0.35 | SMc00406 | | 4Fe-4S ferredoxin | low | > 103 |
| Rhizobium sp. OAE497 | 0.51 | ABIE40_RS09435 | | tRNA guanosine(34) transglycosylase Tgt | 0.34 | ABIE40_RS01310 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 107 |
| Bosea sp. OAE506 | 0.50 | ABIE41_RS18290 | | tRNA guanosine(34) transglycosylase Tgt | 0.35 | ABIE41_RS03135 | | tRNA epoxyqueuosine(34) reductase QueG | 0.21 | 72 |
| Caulobacter crescentus NA1000 | 0.50 | CCNA_01659 | | queuine tRNA-ribosyltransferase | 0.34 | CCNA_03753 | | iron-sulfur cluster-binding protein | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.50 | CCNA_01659 | | queuine tRNA-ribosyltransferase | 0.34 | CCNA_03753 | | iron-sulfur cluster-binding protein | low | > 67 |
| Agrobacterium fabrum C58 | 0.49 | Atu1677 | | queuine tRNA-ribosyltransferase | 0.33 | Atu0292 | | iron-sulfur cluster binding protein | 0.36 | 25 |
| Rhodopseudomonas palustris CGA009 | 0.49 | TX73_013485 | | tRNA guanosine(34) transglycosylase Tgt | 0.34 | TX73_000215 | | tRNA epoxyqueuosine(34) reductase QueG | 0.57 | 3 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.49 | A4249_RS02905 | | tRNA guanosine(34) transglycosylase Tgt | 0.32 | A4249_RS11375 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 48 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.45 | ABZR88_RS13980 | | tRNA guanosine(34) transglycosylase Tgt | 0.34 | ABZR88_RS07975 | | tRNA epoxyqueuosine(34) reductase QueG | 0.45 | 64 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.45 | Echvi_2049 | | tRNA-guanine transglycosylase, queuosine-34-forming | 0.35 | Echvi_0824 | | iron-sulfur cluster binding protein, putative | low | > 79 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.44 | CA264_00655 | | tRNA-guanine(34) transglycosylase | 0.34 | CA264_19810 | | epoxyqueuosine reductase | low | > 74 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.44 | CA265_RS13030 | | tRNA guanosine(34) transglycosylase Tgt | 0.35 | CA265_RS07695 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 88 |
| Parabacteroides merdae CL09T00C40 | 0.44 | HMPREF1078_RS01080 | | tRNA guanosine(34) transglycosylase Tgt | 0.30 | HMPREF1078_RS06835 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 61 |
| Synechococcus elongatus PCC 7942 | 0.43 | Synpcc7942_0455 | tgt | queuine tRNA-ribosyltransferase | 0.32 | Synpcc7942_0530 | | 4Fe-4S cluster binding | low | > 38 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.41 | BT0835 | | tRNA-guanine transglycosylase (NCBI ptt file) | 0.28 | BT3245 | | putative iron-sulfur cluster-binding protein (NCBI ptt file) | — | — |
Not shown: 11 genomes with orthologs for Psest_1242 only; 1 genomes with orthologs for Psest_0677 only