Conservation of cofitness between GFF4040 and GFF4043 in Hydrogenophaga sp. GW460-11-11-14-LB1

89 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4040 Cell division trigger factor (EC 5.2.1.8) 1.0 GFF4043 ATP-dependent Clp protease ATP-binding subunit ClpX 0.79 5
Acidovorax sp. GW101-3H11 0.84 Ac3H11_934 Cell division trigger factor (EC 5.2.1.8) 0.89 Ac3H11_936 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Variovorax sp. SCN45 0.84 GFF490 Cell division trigger factor (EC 5.2.1.8) 0.88 GFF488 ATP-dependent Clp protease ATP-binding subunit ClpX 0.81 66
Variovorax sp. OAS795 0.83 ABID97_RS17605 trigger factor 0.88 ABID97_RS17595 ATP-dependent Clp protease ATP-binding subunit ClpX low > 91
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_00895 trigger factor 0.75 H281DRAFT_00897 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS21990 trigger factor 0.76 QEN71_RS21980 ATP-dependent Clp protease ATP-binding subunit ClpX low > 153
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS09445 trigger factor 0.75 BPHYT_RS09455 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Ralstonia solanacearum UW163 0.56 UW163_RS14665 trigger factor 0.77 UW163_RS14655 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Ralstonia solanacearum IBSBF1503 0.56 RALBFv3_RS01355 trigger factor 0.77 RALBFv3_RS01345 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Ralstonia solanacearum PSI07 0.56 RPSI07_RS16120 trigger factor 0.77 RPSI07_RS16130 ATP-dependent Clp protease ATP-binding subunit ClpX low > 81
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS12800 trigger factor 0.77 ABZR87_RS12790 ATP-dependent Clp protease ATP-binding subunit ClpX low > 80
Ralstonia solanacearum GMI1000 0.56 RS_RS08640 trigger factor 0.77 RS_RS08650 ATP-dependent Clp protease ATP-binding subunit ClpX low > 80
Paraburkholderia graminis OAS925 0.56 ABIE53_002114 trigger factor 0.75 ABIE53_002116 ATP-dependent Clp protease ATP-binding subunit ClpX low > 113
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS12920 trigger factor 0.78 HSERO_RS12910 ATP-dependent protease — —
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS09015 trigger factor 0.77 RR42_RS09025 Clp protease ATP-binding protein — —
Castellaniella sp019104865 MT123 0.52 ABCV34_RS05140 trigger factor 0.71 ABCV34_RS05130 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Dechlorosoma suillum PS 0.50 Dsui_2195 trigger factor 0.76 Dsui_2197 endopeptidase Clp ATP-binding regulatory subunit ClpX low > 51
Pseudomonas sp. S08-1 0.40 OH686_03650 trigger factor 0.70 OH686_03640 ATP-dependent Clp protease, ATP-binding subunit ClpX low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF4352 Cell division trigger factor (EC 5.2.1.8) 0.70 GFF4354 ATP-dependent Clp protease ATP-binding subunit ClpX low > 78
Rahnella sp. WP5 0.39 EX31_RS22240 trigger factor 0.69 EX31_RS22250 ATP-dependent protease ATP-binding subunit ClpX low > 89
Escherichia coli Nissle 1917 0.39 ECOLIN_RS02620 trigger factor 0.70 ECOLIN_RS02630 ATP-dependent protease ATP-binding subunit ClpX low > 52
Erwinia tracheiphila SCR3 0.39 LU632_RS18350 tig trigger factor 0.70 LU632_RS18340 clpX ATP-dependent protease ATP-binding subunit ClpX — —
Serratia liquefaciens MT49 0.39 IAI46_05005 trigger factor 0.69 IAI46_05015 ATP-dependent protease ATP-binding subunit ClpX low > 86
Escherichia coli ECOR38 0.39 HEPCGN_06955 tig trigger factor 0.70 HEPCGN_06945 clpX ATP-dependent protease ATP-binding subunit ClpX low > 85
Escherichia coli BW25113 0.39 b0436 tig trigger factor (NCBI) 0.70 b0438 clpX ATP-dependent protease ATP-binding subunit (NCBI) low > 76
Escherichia coli ECRC101 0.39 OKFHMN_08340 tig trigger factor 0.70 OKFHMN_08330 clpX ATP-dependent protease ATP-binding subunit ClpX — —
Escherichia coli ECRC98 0.39 JDDGAC_11995 tig trigger factor 0.70 JDDGAC_11985 clpX ATP-dependent protease ATP-binding subunit ClpX — —
Escherichia coli ECOR27 0.39 NOLOHH_01275 tig trigger factor 0.70 NOLOHH_01265 clpX ATP-dependent protease ATP-binding subunit ClpX — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_03237 Trigger factor 0.70 OHPLBJKB_03235 ATP-dependent Clp protease ATP-binding subunit ClpX low > 73
Escherichia coli BL21 0.39 ECD_00387 peptidyl-prolyl cis/trans isomerase (trigger factor) 0.70 ECD_00389 ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease 0.64 43
Escherichia coli ECRC99 0.39 KEDOAH_19625 tig trigger factor 0.70 KEDOAH_19635 clpX ATP-dependent protease ATP-binding subunit ClpX — —
Escherichia coli ECRC101 0.39 MCAODC_27565 tig trigger factor 0.70 MCAODC_27555 clpX ATP-dependent protease ATP-binding subunit ClpX — —
Escherichia coli ECRC102 0.39 NIAGMN_06395 tig trigger factor 0.70 NIAGMN_06385 clpX ATP-dependent protease ATP-binding subunit ClpX — —
Escherichia fergusonii Becca 0.39 EFB2_03621 Trigger factor 0.70 EFB2_03619 ATP-dependent Clp protease ATP-binding subunit ClpX low > 86
Shewanella amazonensis SB2B 0.39 Sama_1223 tig trigger factor (RefSeq) 0.71 Sama_1225 clpX ATP-dependent protease ATP-binding subunit ClpX (RefSeq) low > 62
Escherichia coli ECRC62 0.39 BNILDI_22690 tig trigger factor 0.70 BNILDI_22680 clpX ATP-dependent protease ATP-binding subunit ClpX — —
Klebsiella michiganensis M5al 0.39 BWI76_RS06520 trigger factor 0.71 BWI76_RS06530 ATP-dependent Clp protease ATP-binding subunit ClpX low > 92
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_2551 Cell division trigger factor (EC 5.2.1.8) 0.70 PfGW456L13_2553 ATP-dependent Clp protease ATP-binding subunit ClpX low > 87
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_3944 Cell division trigger factor (EC 5.2.1.8) 0.70 Pf1N1B4_3946 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Pseudomonas putida KT2440 0.38 PP_2299 Trigger factor 0.71 PP_2301 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Shewanella loihica PV-4 0.38 Shew_2509 tig trigger factor (RefSeq) 0.70 Shew_2507 clpX ATP-dependent protease ATP-binding subunit (RefSeq) — —
Enterobacter sp. TBS_079 0.38 MPMX20_01027 Trigger factor 0.70 MPMX20_01029 ATP-dependent Clp protease ATP-binding subunit ClpX low > 85
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_2219 Cell division trigger factor (EC 5.2.1.8) 0.70 Pf6N2E2_2217 ATP-dependent Clp protease ATP-binding subunit ClpX low > 103
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_1746 Trigger factor 0.71 Psyr_1748 ATP-dependent Clp protease ATP-binding subunit ClpX low > 86
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_1033 trigger factor 0.68 B158DRAFT_1037 endopeptidase Clp ATP-binding regulatory subunit (clpX) low > 40
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_1746 Trigger factor 0.71 Psyr_1748 ATP-dependent Clp protease ATP-binding subunit ClpX low > 86
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_09620 trigger factor 0.68 CSW01_09610 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Pseudomonas fluorescens SBW25 0.38 PFLU_RS19175 trigger factor 0.70 PFLU_RS19165 ATP-dependent Clp protease ATP-binding subunit ClpX low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS19175 trigger factor 0.70 PFLU_RS19165 ATP-dependent Clp protease ATP-binding subunit ClpX low > 109
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_01755 trigger factor 0.70 AO356_01745 ATP-dependent Clp protease ATP-binding subunit ClpX low > 104
Pseudomonas stutzeri RCH2 0.38 Psest_2288 trigger factor 0.70 Psest_2286 endopeptidase Clp ATP-binding regulatory subunit (clpX) — —
Enterobacter asburiae PDN3 0.38 EX28DRAFT_2535 trigger factor 0.70 EX28DRAFT_2533 endopeptidase Clp ATP-binding regulatory subunit (clpX) — —
Pseudomonas simiae WCS417 0.38 PS417_17240 trigger factor 0.70 PS417_17230 Clp protease ATP-binding protein — —
Pectobacterium carotovorum WPP14 0.38 HER17_RS15855 trigger factor 0.69 HER17_RS15845 ATP-dependent protease ATP-binding subunit ClpX — —
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_20170 trigger factor 0.70 AO353_20180 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Pantoea sp. MT58 0.37 IAI47_14660 trigger factor 0.70 IAI47_14650 ATP-dependent protease ATP-binding subunit ClpX — —
Dickeya dianthicola ME23 0.37 DZA65_RS06005 trigger factor 0.69 DZA65_RS06015 ATP-dependent protease ATP-binding subunit ClpX — —
Dickeya dianthicola 67-19 0.37 HGI48_RS05680 trigger factor 0.69 HGI48_RS05690 ATP-dependent protease ATP-binding subunit ClpX low > 71
Dickeya dadantii 3937 0.37 DDA3937_RS05635 trigger factor 0.69 DDA3937_RS05645 ATP-dependent protease ATP-binding subunit ClpX low > 74
Alteromonas macleodii MIT1002 0.37 MIT1002_02761 Trigger factor 0.70 MIT1002_02759 ATP-dependent Clp protease ATP-binding subunit ClpX low > 70
Pseudomonas sp. RS175 0.37 PFR28_01227 Trigger factor 0.70 PFR28_01229 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Acinetobacter radioresistens SK82 0.37 MPMX26_00407 Trigger factor 0.63 MPMX26_00409 ATP-dependent Clp protease ATP-binding subunit ClpX low > 36
Marinobacter adhaerens HP15 0.37 HP15_2186 trigger factor 0.68 HP15_2184 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Shewanella oneidensis MR-1 0.36 SO1793 tig trigger factor (NCBI ptt file) 0.70 SO1795 clpX ATP-dependent Clp protease, ATP-binding subunit ClpX (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.36 Shewana3_2662 tig trigger factor (RefSeq) 0.70 Shewana3_2660 clpX ATP-dependent protease ATP-binding subunit ClpX (RefSeq) low > 73
Lysobacter sp. OAE881 0.30 ABIE51_RS14160 trigger factor 0.71 ABIE51_RS14150 ATP-dependent Clp protease ATP-binding subunit ClpX low > 62
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS07335 trigger factor 0.70 ABZR86_RS07325 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS16720 trigger factor 0.70 LRK54_RS16730 ATP-dependent Clp protease ATP-binding subunit ClpX low > 59
Rhodanobacter denitrificans MT42 0.29 LRK55_RS16445 trigger factor 0.70 LRK55_RS16455 ATP-dependent Clp protease ATP-binding subunit ClpX low > 63
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.4049.1 Cell division trigger factor (EC 5.2.1.8) 0.70 Xcc-8004.4047.1 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_08045 tig trigger factor 0.70 OKGIIK_08035 clpX ATP-dependent Clp protease ATP-binding subunit ClpX — —
Rhodospirillum rubrum S1H 0.26 Rru_A1549 Trigger factor (NCBI) 0.66 Rru_A1551 ClpX, ATPase regulatory subunit (NCBI) — —
Bosea sp. OAE506 0.25 ABIE41_RS18065 trigger factor 0.68 ABIE41_RS18055 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Magnetospirillum magneticum AMB-1 0.25 AMB_RS14050 trigger factor 0.67 AMB_RS14040 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Azospirillum brasilense Sp245 0.24 AZOBR_RS07130 trigger factor 0.68 AZOBR_RS07140 ATP-dependent protease — —
Brevundimonas sp. GW460-12-10-14-LB2 0.24 A4249_RS06500 trigger factor 0.65 A4249_RS06475 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_0089 trigger factor 0.67 Ga0059261_0096 endopeptidase Clp ATP-binding regulatory subunit (clpX) — —
Caulobacter crescentus NA1000 Δfur 0.23 CCNA_02042 trigger factor chaperone 0.65 CCNA_02039 ATP-dependent endopeptidase clp, ATP-binding subunit ClpX — —
Azospirillum sp. SherDot2 0.23 MPMX19_01549 Trigger factor 0.68 MPMX19_01547 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Caulobacter crescentus NA1000 0.23 CCNA_02042 trigger factor chaperone 0.65 CCNA_02039 ATP-dependent endopeptidase clp, ATP-binding subunit ClpX — —
Rhodopseudomonas palustris CGA009 0.23 TX73_015360 trigger factor 0.68 TX73_015350 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Sinorhizobium meliloti 1021 0.22 SMc02050 trigger factor 0.68 SMc01904 ATP-dependent protease ATP-binding subunit ClpX — —
Dinoroseobacter shibae DFL-12 0.21 Dshi_2190 trigger factor (RefSeq) 0.67 Dshi_1387 ATP-dependent Clp protease, ATP-binding subunit ClpX (RefSeq) low > 64
Rhizobium sp. OAE497 0.21 ABIE40_RS08600 trigger factor 0.67 ABIE40_RS07095 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Agrobacterium fabrum C58 0.21 Atu1664 trigger factor 0.67 Atu1259 ATP-dependent Clp protease, ATP-binding subunit — —
Phaeobacter inhibens DSM 17395 0.20 PGA1_c18160 trigger factor Tig 0.69 PGA1_c12530 ATP-dependent Clp protease ATP-binding subunit ClpX low > 62
Fusobacterium nucleatum SB010 0.17 HUW76_01050 trigger factor 0.56 HUW76_01060 ATP-dependent Clp protease ATP-binding subunit ClpX 1.00 2
Desulfovibrio vulgaris Hildenborough JW710 0.17 DVU1334 tig trigger factor (TIGR) 0.58 DVU1336 clpX ATP-dependent Clp protease, ATP-binding subunit ClpX (TIGR) — —
Synechococcus elongatus PCC 7942 0.15 Synpcc7942_2524 tig trigger factor 0.56 Synpcc7942_2526 clpX ATP-dependent protease ATP-binding subunit — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.07 ABZR88_RS06955 trigger factor 0.50 ABZR88_RS06965 ATP-dependent Clp protease ATP-binding subunit ClpX low > 71

Not shown: 1 genomes with orthologs for GFF4040 only; 11 genomes with orthologs for GFF4043 only