Conservation of cofitness between Psest_1242 and Psest_3711 in Pseudomonas stutzeri RCH2

91 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1242 tRNA-guanine transglycosylase, queuosine-34-forming 1.0 Psest_3711 Glutamate synthase domain 2 0.24 17
Pseudomonas sp. S08-1 0.93 OH686_17430 tRNA-guanine transglycosylase 0.87 OH686_10005 Glutamate synthase [NADPH] large chain low > 80
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_4882 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.86 PfGW456L13_272 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.92 Psyr_1228 tRNA-guanine transglycosylase 0.87 Psyr_0411 glutamate synthase (NADPH) large subunit — —
Pseudomonas syringae pv. syringae B728a 0.92 Psyr_1228 tRNA-guanine transglycosylase 0.87 Psyr_0411 glutamate synthase (NADPH) large subunit — —
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_15790 queuine tRNA-ribosyltransferase 0.86 AO353_12515 glutamate synthase — —
Pseudomonas sp. RS175 0.92 PFR28_00277 Queuine tRNA-ribosyltransferase 0.87 PFR28_05015 Glutamate synthase [NADPH] large chain low > 88
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_3006 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.85 Pf1N1B4_1534 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 87
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_3198 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.87 Pf6N2E2_3752 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 103
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_06690 queuine tRNA-ribosyltransferase 0.87 AO356_09375 glutamate synthase low > 104
Pseudomonas simiae WCS417 0.90 PS417_23245 queuine tRNA-ribosyltransferase 0.86 PS417_02000 glutamate synthase — —
Pseudomonas fluorescens SBW25 0.90 PFLU_RS24900 tRNA guanosine(34) transglycosylase Tgt 0.86 PFLU_RS02045 glutamate synthase large subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS24900 tRNA guanosine(34) transglycosylase Tgt 0.86 PFLU_RS02045 glutamate synthase large subunit low > 109
Pseudomonas putida KT2440 0.89 PP_0833 queuine tRNA-ribosyltransferase 0.86 PP_5076 L-glutamate synthase(NADPH) alpha subunit low > 96
Marinobacter adhaerens HP15 0.78 HP15_1479 queuine tRNA-ribosyltransferase 0.74 HP15_482 glutamate synthase subunit alpha — —
Alteromonas macleodii MIT1002 0.75 MIT1002_02813 Queuine tRNA-ribosyltransferase 0.60 MIT1002_03139 Glutamate synthase [NADPH] large chain precursor low > 70
Serratia liquefaciens MT49 0.74 IAI46_04840 tRNA guanosine(34) transglycosylase Tgt 0.61 IAI46_22345 glutamate synthase large subunit low > 86
Rahnella sp. WP5 0.73 EX31_RS22095 tRNA guanosine(34) transglycosylase Tgt 0.60 EX31_RS12515 glutamate synthase large subunit low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF4305 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.60 GFF2956 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 78
Enterobacter sp. TBS_079 0.73 MPMX20_00997 Queuine tRNA-ribosyltransferase 0.60 MPMX20_04126 Glutamate synthase [NADPH] large chain low > 85
Enterobacter asburiae PDN3 0.73 EX28DRAFT_2565 tRNA-guanine transglycosylase 0.60 EX28DRAFT_3275 Glutamate synthase domain 2 low > 76
Klebsiella michiganensis M5al 0.73 BWI76_RS06300 tRNA guanosine(34) transglycosylase Tgt 0.60 BWI76_RS25315 glutamate synthase large subunit — —
Shewanella amazonensis SB2B 0.73 Sama_2193 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.59 Sama_0857 gltB glutamate synthase subunit alpha (RefSeq) low > 62
Shewanella sp. ANA-3 0.73 Shewana3_1435 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.58 Shewana3_3050 gltB glutamate synthase subunit alpha (RefSeq) low > 73
Acinetobacter radioresistens SK82 0.73 MPMX26_00438 Queuine tRNA-ribosyltransferase 0.69 MPMX26_02808 Glutamate synthase [NADPH] large chain low > 36
Dickeya dadantii 3937 0.73 DDA3937_RS05470 tRNA guanosine(34) transglycosylase Tgt 0.60 DDA3937_RS01665 glutamate synthase large subunit low > 74
Shewanella oneidensis MR-1 0.72 SO3113 tgt queuine tRNA-ribosyltransferase (NCBI ptt file) 0.58 SO1325 gltB glutamate synthase, large subunit (NCBI ptt file) low > 76
Dickeya dianthicola ME23 0.72 DZA65_RS05855 tRNA guanosine(34) transglycosylase Tgt 0.60 DZA65_RS01635 glutamate synthase large subunit low > 75
Dickeya dianthicola 67-19 0.72 HGI48_RS05530 tRNA guanosine(34) transglycosylase Tgt 0.60 HGI48_RS01560 glutamate synthase large subunit low > 71
Escherichia coli ECRC101 0.72 OKFHMN_08505 tgt tRNA guanosine(34) transglycosylase Tgt 0.60 OKFHMN_17885 gltB glutamate synthase large subunit — —
Escherichia coli ECOR27 0.72 NOLOHH_01440 tgt tRNA guanosine(34) transglycosylase Tgt 0.60 NOLOHH_09685 gltB glutamate synthase large subunit low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_03270 Queuine tRNA-ribosyltransferase 0.60 OHPLBJKB_00488 Glutamate synthase [NADPH] large chain low > 73
Shewanella loihica PV-4 0.72 Shew_2337 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.58 Shew_1032 gltB glutamate synthase subunit alpha (RefSeq) low > 60
Escherichia coli ECRC99 0.72 KEDOAH_19460 tgt tRNA guanosine(34) transglycosylase Tgt 0.60 KEDOAH_10265 gltB glutamate synthase large subunit — —
Escherichia coli ECRC101 0.72 MCAODC_27730 tgt tRNA guanosine(34) transglycosylase Tgt 0.60 MCAODC_08405 gltB glutamate synthase large subunit — —
Escherichia coli ECRC98 0.72 JDDGAC_12160 tgt tRNA guanosine(34) transglycosylase Tgt 0.60 JDDGAC_21510 gltB glutamate synthase large subunit — —
Escherichia fergusonii Becca 0.72 EFB2_03651 Queuine tRNA-ribosyltransferase 0.60 EFB2_00611 Glutamate synthase [NADPH] large chain low > 86
Escherichia coli BW25113 0.72 b0406 tgt queuine tRNA-ribosyltransferase (NCBI) 0.60 b3212 gltB glutamate synthase, large subunit (NCBI) low > 76
Escherichia coli Nissle 1917 0.72 ECOLIN_RS02445 tRNA guanosine(34) transglycosylase Tgt 0.60 ECOLIN_RS18475 glutamate synthase large subunit — —
Escherichia coli ECRC62 0.72 BNILDI_22855 tgt tRNA guanosine(34) transglycosylase Tgt 0.60 BNILDI_01850 gltB glutamate synthase large subunit — —
Escherichia coli ECOR38 0.72 HEPCGN_07145 tgt tRNA guanosine(34) transglycosylase Tgt 0.60 HEPCGN_16760 gltB3 Glutamate synthase domain 3 low > 85
Escherichia coli ECRC102 0.72 NIAGMN_06560 tgt tRNA guanosine(34) transglycosylase Tgt 0.60 NIAGMN_15645 gltB glutamate synthase large subunit — —
Escherichia coli BL21 0.72 ECD_00354 tRNA-guanine transglycosylase 0.60 ECD_03077 glutamate synthase, large subunit low > 60
Pectobacterium carotovorum WPP14 0.72 HER17_RS15990 tRNA guanosine(34) transglycosylase Tgt 0.60 HER17_RS19910 glutamate synthase large subunit low > 75
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_03850 tRNA guanosine(34) transglycosylase Tgt 0.62 CSW01_12030 glutamate synthase large subunit low > 62
Erwinia tracheiphila SCR3 0.70 LU632_RS18500 tgt tRNA guanosine(34) transglycosylase Tgt 0.60 LU632_RS21315 gltB glutamate synthase large subunit low > 74
Dechlorosoma suillum PS 0.68 Dsui_3323 tRNA-guanine transglycosylase, queuosine-34-forming 0.40 Dsui_1096 glutamate synthase family protein low > 51
Xanthomonas campestris pv. campestris strain 8004 0.67 Xcc-8004.2168.1 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.57 Xcc-8004.44.1 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 74
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS09540 tRNA guanosine(34) transglycosylase Tgt 0.55 ABZR86_RS16795 glutamate synthase large subunit low > 74
Rhodanobacter denitrificans FW104-10B01 0.65 LRK54_RS03130 tRNA guanosine(34) transglycosylase Tgt 0.55 LRK54_RS10960 glutamate synthase large subunit low > 59
Rhodanobacter denitrificans MT42 0.65 LRK55_RS02880 tRNA guanosine(34) transglycosylase Tgt 0.55 LRK55_RS10665 glutamate synthase large subunit low > 63
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_10000 tgt tRNA guanosine(34) transglycosylase Tgt 0.38 OKGIIK_15200 Glutamate synthase subunit alpha low > 52
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS06175 queuine tRNA-ribosyltransferase 0.39 HSERO_RS19595 glutamate synthase low > 78
Castellaniella sp019104865 MT123 0.64 ABCV34_RS15365 tRNA guanosine(34) transglycosylase Tgt 0.38 ABCV34_RS11150 glutamate synthase-related protein low > 48
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS17400 queuine tRNA-ribosyltransferase 0.39 RR42_RS18990 glutamate synthase low > 128
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS26640 tRNA guanosine(34) transglycosylase Tgt 0.38 QEN71_RS28010 glutamate synthase-related protein low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF2798 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.39 GFF1327 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 90
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS01280 tRNA guanosine(34) transglycosylase Tgt 0.38 ABZR87_RS02570 glutamate synthase-related protein low > 80
Paraburkholderia bryophila 376MFSha3.1 0.60 H281DRAFT_04670 tRNA-guanine transglycosylase 0.39 H281DRAFT_05620 glutamate synthase (NADH) large subunit low > 103
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS03410 queuine tRNA-ribosyltransferase 0.38 BPHYT_RS17855 glutamate synthase low > 109
Acidovorax sp. GW101-3H11 0.60 Ac3H11_861 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.39 Ac3H11_4710 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.39 45
Ralstonia solanacearum GMI1000 0.60 RS_RS13575 tRNA guanosine(34) transglycosylase Tgt 0.38 RS_RS14860 glutamate synthase subunit alpha low > 80
Ralstonia solanacearum UW163 0.59 UW163_RS07940 tRNA guanosine(34) transglycosylase Tgt 0.39 UW163_RS06700 glutamate synthase subunit alpha — —
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS05685 tRNA guanosine(34) transglycosylase Tgt 0.39 RALBFv3_RS06915 glutamate synthase subunit alpha low > 76
Variovorax sp. SCN45 0.59 GFF5534 Queuine tRNA-ribosyltransferase (EC 2.4.2.29) 0.39 GFF5332 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 127
Variovorax sp. OAS795 0.59 ABID97_RS01595 tRNA guanosine(34) transglycosylase Tgt 0.39 ABID97_RS23225 glutamate synthase-related protein low > 91
Ralstonia solanacearum PSI07 0.58 RPSI07_RS11615 tRNA guanosine(34) transglycosylase Tgt 0.39 RPSI07_RS10320 glutamate synthase subunit alpha low > 81
Rhodospirillum rubrum S1H 0.54 Rru_A0280 Queuine tRNA-ribosyltransferase (NCBI) 0.39 Rru_A0019 Glutamate synthase (ferredoxin) (NCBI) — —
Phaeobacter inhibens DSM 17395 0.54 PGA1_c20570 queuine tRNA-ribosyltransferase Tgt 0.40 PGA1_c36100 glutamate synthase [NADPH] large chain low > 62
Azospirillum sp. SherDot2 0.53 MPMX19_01697 Queuine tRNA-ribosyltransferase 0.40 MPMX19_02657 Glutamate synthase [NADPH] large chain low > 112
Dinoroseobacter shibae DFL-12 0.53 Dshi_2346 queuine tRNA-ribosyltransferase (RefSeq) 0.39 Dshi_0002 Glutamate synthase (ferredoxin) (RefSeq) low > 64
Magnetospirillum magneticum AMB-1 0.52 AMB_RS03090 tRNA guanosine(34) transglycosylase Tgt 0.39 AMB_RS02685 glutamate synthase large subunit low > 64
Sphingomonas koreensis DSMZ 15582 0.51 Ga0059261_1017 tRNA-guanine transglycosylase 0.40 Ga0059261_1800 Glutamate synthase domain 2 low > 68
Rhizobium sp. OAE497 0.51 ABIE40_RS09435 tRNA guanosine(34) transglycosylase Tgt 0.40 ABIE40_RS16275 glutamate synthase large subunit — —
Sinorhizobium meliloti 1021 0.51 SMc01206 queuine tRNA-ribosyltransferase 0.40 SMc04028 glutamate synthase low > 103
Bosea sp. OAE506 0.50 ABIE41_RS18290 tRNA guanosine(34) transglycosylase Tgt 0.41 ABIE41_RS08565 glutamate synthase large subunit low > 77
Caulobacter crescentus NA1000 0.50 CCNA_01659 queuine tRNA-ribosyltransferase 0.37 CCNA_03722 glutamate synthase (NADPH) large chain GltB low > 66
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_01659 queuine tRNA-ribosyltransferase 0.37 CCNA_03722 glutamate synthase (NADPH) large chain GltB low > 67
Agrobacterium fabrum C58 0.49 Atu1677 queuine tRNA-ribosyltransferase 0.40 Atu3784 glutamate synthase large subunit low > 89
Rhodopseudomonas palustris CGA009 0.49 TX73_013485 tRNA guanosine(34) transglycosylase Tgt 0.40 TX73_004590 glutamate synthase large subunit — —
Brevundimonas sp. GW460-12-10-14-LB2 0.49 A4249_RS02905 tRNA guanosine(34) transglycosylase Tgt 0.36 A4249_RS16105 glutamate synthase large subunit low > 48
Mucilaginibacter yixingensis YX-36 DSM 26809 0.45 ABZR88_RS13980 tRNA guanosine(34) transglycosylase Tgt 0.39 ABZR88_RS06905 glutamate synthase large subunit low > 71
Echinicola vietnamensis KMM 6221, DSM 17526 0.45 Echvi_2049 tRNA-guanine transglycosylase, queuosine-34-forming 0.40 Echvi_1244 Glutamate synthase domain 2 low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.44 CA265_RS13030 tRNA guanosine(34) transglycosylase Tgt 0.39 CA265_RS08700 glutamate synthase large subunit 0.51 68
Parabacteroides merdae CL09T00C40 0.44 HMPREF1078_RS01080 tRNA guanosine(34) transglycosylase Tgt 0.43 HMPREF1078_RS01270 glutamate synthase large subunit low > 61
Synechococcus elongatus PCC 7942 0.43 Synpcc7942_0455 tgt queuine tRNA-ribosyltransferase 0.43 Synpcc7942_0890 glsF glutamate synthase (ferredoxin) — —
Bacteroides stercoris CC31F 0.43 HMPREF1181_RS14345 tRNA guanosine(34) transglycosylase Tgt 0.42 HMPREF1181_RS16055 glutamate synthase large subunit low > 56
Phocaeicola vulgatus CL09T03C04 0.43 HMPREF1058_RS01215 tRNA guanosine(34) transglycosylase Tgt 0.41 HMPREF1058_RS06920 glutamate synthase large subunit low > 67
Phocaeicola dorei CL03T12C01 0.43 ABI39_RS16515 tRNA guanosine(34) transglycosylase Tgt 0.41 ABI39_RS20685 glutamate synthase large subunit low > 72
Bacteroides thetaiotaomicron VPI-5482 0.41 BT0835 tRNA-guanine transglycosylase (NCBI ptt file) 0.42 BT0553 glutamate synthase, large subunit (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.41 BACOVA_02570 tRNA-guanine transglycosylase 0.42 BACOVA_03756 class II glutamine amidotransferase low > 94
Bifidobacterium breve UCC2003 0.33 BBR_RS10715 tRNA-guanine(34) transglycosylase 0.39 BBR_RS15255 glutamate synthase large subunit low > 34

Not shown: 8 genomes with orthologs for Psest_1242 only; 1 genomes with orthologs for Psest_3711 only