| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_1242 | | tRNA-guanine transglycosylase, queuosine-34-forming | 1.0 | Psest_3710 | | glutamate synthase small subunit family protein, proteobacterial | 0.24 | 19 |
| Pseudomonas sp. S08-1 | 0.93 | OH686_17430 | | tRNA-guanine transglycosylase | 0.90 | OH686_10000 | | Glutamate synthase [NADPH] small chain | low | > 80 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.92 | Psyr_1228 | | tRNA-guanine transglycosylase | 0.90 | Psyr_0412 | | glutamate synthase (NADPH) small subunit | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.92 | Psyr_1228 | | tRNA-guanine transglycosylase | 0.90 | Psyr_0412 | | glutamate synthase (NADPH) small subunit | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.92 | PfGW456L13_4882 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.91 | PfGW456L13_271 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.92 | AO353_15790 | | queuine tRNA-ribosyltransferase | 0.91 | AO353_12520 | | glutamate synthase | — | — |
| Pseudomonas sp. RS175 | 0.92 | PFR28_00277 | | Queuine tRNA-ribosyltransferase | 0.91 | PFR28_05016 | | Glutamate synthase [NADPH] small chain | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.91 | Pf1N1B4_3006 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.90 | Pf1N1B4_1533 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.91 | Pf6N2E2_3198 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.90 | Pf6N2E2_3751 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.91 | AO356_06690 | | queuine tRNA-ribosyltransferase | 0.91 | AO356_09370 | | glutamate synthase | low | > 104 |
| Pseudomonas simiae WCS417 | 0.90 | PS417_23245 | | queuine tRNA-ribosyltransferase | 0.90 | PS417_02005 | | glutamate synthase | — | — |
| Pseudomonas fluorescens SBW25 | 0.90 | PFLU_RS24900 | | tRNA guanosine(34) transglycosylase Tgt | 0.90 | PFLU_RS02050 | | NAD(P)-binding protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.90 | PFLU_RS24900 | | tRNA guanosine(34) transglycosylase Tgt | 0.90 | PFLU_RS02050 | | NAD(P)-binding protein | low | > 109 |
| Pseudomonas putida KT2440 | 0.89 | PP_0833 | | queuine tRNA-ribosyltransferase | 0.92 | PP_5075 | | glutamate synthase (NADPH) beta subunit | low | > 96 |
| Marinobacter adhaerens HP15 | 0.78 | HP15_1479 | | queuine tRNA-ribosyltransferase | 0.80 | HP15_483 | | oxidoreductase Fe-S binding subunit | — | — |
| Alteromonas macleodii MIT1002 | 0.75 | MIT1002_02813 | | Queuine tRNA-ribosyltransferase | 0.70 | MIT1002_03140 | | Glutamate synthase [NADPH] small chain | low | > 70 |
| Serratia liquefaciens MT49 | 0.74 | IAI46_04840 | | tRNA guanosine(34) transglycosylase Tgt | 0.70 | IAI46_22350 | | glutamate synthase small subunit | low | > 86 |
| Enterobacter asburiae PDN3 | 0.73 | EX28DRAFT_2565 | | tRNA-guanine transglycosylase | 0.70 | EX28DRAFT_3276 | | glutamate synthase small subunit family protein, proteobacterial | low | > 76 |
| Enterobacter sp. TBS_079 | 0.73 | MPMX20_00997 | | Queuine tRNA-ribosyltransferase | 0.70 | MPMX20_04127 | | Glutamate synthase [NADPH] small chain | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.73 | GFF4305 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.70 | GFF2957 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | low | > 78 |
| Rahnella sp. WP5 | 0.73 | EX31_RS22095 | | tRNA guanosine(34) transglycosylase Tgt | 0.71 | EX31_RS12510 | | FAD-dependent oxidoreductase | low | > 89 |
| Klebsiella michiganensis M5al | 0.73 | BWI76_RS06300 | | tRNA guanosine(34) transglycosylase Tgt | 0.69 | BWI76_RS25320 | | glutamate synthase | — | — |
| Shewanella sp. ANA-3 | 0.73 | Shewana3_1435 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.69 | Shewana3_3051 | gltD | glutamate synthase subunit beta (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.73 | Sama_2193 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.70 | Sama_0856 | gltD | glutamate synthase subunit beta (RefSeq) | low | > 62 |
| Acinetobacter radioresistens SK82 | 0.73 | MPMX26_00438 | | Queuine tRNA-ribosyltransferase | 0.81 | MPMX26_02807 | | Glutamate synthase [NADPH] small chain | low | > 36 |
| Dickeya dadantii 3937 | 0.73 | DDA3937_RS05470 | | tRNA guanosine(34) transglycosylase Tgt | 0.71 | DDA3937_RS01660 | | FAD-dependent oxidoreductase | low | > 74 |
| Dickeya dianthicola 67-19 | 0.72 | HGI48_RS05530 | | tRNA guanosine(34) transglycosylase Tgt | 0.71 | HGI48_RS01555 | | glutamate synthase small subunit | low | > 71 |
| Dickeya dianthicola ME23 | 0.72 | DZA65_RS05855 | | tRNA guanosine(34) transglycosylase Tgt | 0.70 | DZA65_RS01630 | | FAD-dependent oxidoreductase | low | > 75 |
| Shewanella oneidensis MR-1 | 0.72 | SO3113 | tgt | queuine tRNA-ribosyltransferase (NCBI ptt file) | 0.69 | SO1324 | gltD | glutamate synthase, small subunit (NCBI ptt file) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.72 | OHPLBJKB_03270 | | Queuine tRNA-ribosyltransferase | 0.71 | OHPLBJKB_00487 | | Glutamate synthase [NADPH] small chain | low | > 73 |
| Shewanella loihica PV-4 | 0.72 | Shew_2337 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.69 | Shew_1031 | gltD | glutamate synthase subunit beta (RefSeq) | low | > 60 |
| Escherichia coli BW25113 | 0.72 | b0406 | tgt | queuine tRNA-ribosyltransferase (NCBI) | 0.71 | b3213 | gltD | glutamate synthase, 4Fe-4S protein, small subunit (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.72 | HEPCGN_07145 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.71 | HEPCGN_16755 | gltD | glutamate synthase subunit GltD | low | > 85 |
| Escherichia coli ECRC101 | 0.72 | OKFHMN_08505 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.71 | OKFHMN_17880 | gltD | glutamate synthase subunit GltD | — | — |
| Escherichia coli Nissle 1917 | 0.72 | ECOLIN_RS02445 | | tRNA guanosine(34) transglycosylase Tgt | 0.71 | ECOLIN_RS18480 | | glutamate synthase subunit GltD | — | — |
| Escherichia coli ECRC99 | 0.72 | KEDOAH_19460 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.71 | KEDOAH_10270 | gltD | glutamate synthase subunit GltD | — | — |
| Escherichia coli ECRC102 | 0.72 | NIAGMN_06560 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.71 | NIAGMN_15640 | gltD | glutamate synthase subunit GltD | — | — |
| Escherichia coli ECRC62 | 0.72 | BNILDI_22855 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.71 | BNILDI_01855 | gltD | glutamate synthase subunit GltD | — | — |
| Escherichia coli BL21 | 0.72 | ECD_00354 | | tRNA-guanine transglycosylase | 0.71 | ECD_03078 | | glutamate synthase, 4Fe-4S protein, small subunit | low | > 60 |
| Escherichia coli ECRC98 | 0.72 | JDDGAC_12160 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.71 | JDDGAC_21505 | gltD | glutamate synthase subunit GltD | — | — |
| Escherichia fergusonii Becca | 0.72 | EFB2_03651 | | Queuine tRNA-ribosyltransferase | 0.71 | EFB2_00610 | | Glutamate synthase [NADPH] small chain | low | > 86 |
| Escherichia coli ECOR27 | 0.72 | NOLOHH_01440 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.71 | NOLOHH_09680 | gltD | glutamate synthase subunit GltD | low | > 57 |
| Escherichia coli ECRC101 | 0.72 | MCAODC_27730 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.71 | MCAODC_08400 | gltD | glutamate synthase subunit GltD | — | — |
| Pectobacterium carotovorum WPP14 | 0.72 | HER17_RS15990 | | tRNA guanosine(34) transglycosylase Tgt | 0.69 | HER17_RS19915 | | glutamate synthase small subunit | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.71 | CSW01_03850 | | tRNA guanosine(34) transglycosylase Tgt | 0.68 | CSW01_12035 | | glutamate synthase small subunit | low | > 62 |
| Erwinia tracheiphila SCR3 | 0.70 | LU632_RS18500 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.69 | LU632_RS21320 | | glutamate synthase small subunit | low | > 74 |
| Lysobacter sp. OAE881 | 0.69 | ABIE51_RS15020 | | tRNA guanosine(34) transglycosylase Tgt | 0.59 | ABIE51_RS01315 | | FAD-dependent oxidoreductase | low | > 62 |
| Dechlorosoma suillum PS | 0.68 | Dsui_3323 | | tRNA-guanine transglycosylase, queuosine-34-forming | 0.25 | Dsui_1097 | | NADH/NADPH-dependent glutamate synthase small subunit | low | > 51 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.67 | Xcc-8004.2168.1 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.57 | Xcc-8004.43.1 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.65 | ABZR86_RS09540 | | tRNA guanosine(34) transglycosylase Tgt | 0.56 | ABZR86_RS16800 | | FAD-dependent oxidoreductase | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.65 | LRK54_RS03130 | | tRNA guanosine(34) transglycosylase Tgt | 0.56 | LRK54_RS10965 | | FAD-dependent oxidoreductase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.65 | LRK55_RS02880 | | tRNA guanosine(34) transglycosylase Tgt | 0.56 | LRK55_RS10670 | | FAD-dependent oxidoreductase | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.65 | OKGIIK_10000 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.25 | OKGIIK_15205 | | Glutamate synthase | low | > 52 |
| Herbaspirillum seropedicae SmR1 | 0.64 | HSERO_RS06175 | | queuine tRNA-ribosyltransferase | 0.25 | HSERO_RS19590 | | dihydropyrimidine dehydrogenase subunit A | low | > 78 |
| Castellaniella sp019104865 MT123 | 0.64 | ABCV34_RS15365 | | tRNA guanosine(34) transglycosylase Tgt | 0.26 | ABCV34_RS11155 | | glutamate synthase subunit beta | low | > 48 |
| Cupriavidus basilensis FW507-4G11 | 0.62 | RR42_RS17400 | | queuine tRNA-ribosyltransferase | 0.26 | RR42_RS18985 | | glutamate synthase | low | > 128 |
| Paraburkholderia sabiae LMG 24235 | 0.61 | QEN71_RS26640 | | tRNA guanosine(34) transglycosylase Tgt | 0.27 | QEN71_RS28005 | | glutamate synthase subunit beta | low | > 153 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.61 | GFF2798 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.27 | GFF1326 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | low | > 90 |
| Ralstonia sp. UNC404CL21Col | 0.61 | ABZR87_RS01280 | | tRNA guanosine(34) transglycosylase Tgt | 0.26 | ABZR87_RS02565 | | glutamate synthase subunit beta | low | > 80 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.60 | H281DRAFT_04670 | | tRNA-guanine transglycosylase | 0.28 | H281DRAFT_05621 | | glutamate synthase (NADH) small subunit | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.60 | BPHYT_RS03410 | | queuine tRNA-ribosyltransferase | 0.27 | BPHYT_RS17850 | | dihydropyrimidine dehydrogenase subunit A | — | — |
| Acidovorax sp. GW101-3H11 | 0.60 | Ac3H11_861 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.26 | Ac3H11_4711 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | low | > 79 |
| Ralstonia solanacearum GMI1000 | 0.60 | RS_RS13575 | | tRNA guanosine(34) transglycosylase Tgt | 0.26 | RS_RS14855 | | glutamate synthase subunit beta | 0.40 | 45 |
| Ralstonia solanacearum UW163 | 0.59 | UW163_RS07940 | | tRNA guanosine(34) transglycosylase Tgt | 0.25 | UW163_RS06705 | | glutamate synthase subunit beta | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.59 | RALBFv3_RS05685 | | tRNA guanosine(34) transglycosylase Tgt | 0.25 | RALBFv3_RS06910 | | glutamate synthase subunit beta | low | > 76 |
| Variovorax sp. SCN45 | 0.59 | GFF5534 | | Queuine tRNA-ribosyltransferase (EC 2.4.2.29) | 0.25 | GFF5333 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | low | > 127 |
| Variovorax sp. OAS795 | 0.59 | ABID97_RS01595 | | tRNA guanosine(34) transglycosylase Tgt | 0.27 | ABID97_RS23220 | | glutamate synthase subunit beta | low | > 91 |
| Ralstonia solanacearum PSI07 | 0.58 | RPSI07_RS11615 | | tRNA guanosine(34) transglycosylase Tgt | 0.25 | RPSI07_RS10325 | | glutamate synthase subunit beta | low | > 81 |
| Rhodospirillum rubrum S1H | 0.54 | Rru_A0280 | | Queuine tRNA-ribosyltransferase (NCBI) | 0.40 | Rru_A0018 | | Glutamate synthase, NADH/NADPH, small subunit 2 (NCBI) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.54 | PGA1_c20570 | | queuine tRNA-ribosyltransferase Tgt | 0.39 | PGA1_c36090 | | glutamate synthase [NADPH] small chain | low | > 62 |
| Azospirillum sp. SherDot2 | 0.53 | MPMX19_01697 | | Queuine tRNA-ribosyltransferase | 0.39 | MPMX19_02658 | | Glutamate synthase [NADPH] small chain | low | > 112 |
| Dinoroseobacter shibae DFL-12 | 0.53 | Dshi_2346 | | queuine tRNA-ribosyltransferase (RefSeq) | 0.41 | Dshi_0001 | | glutamate synthase, small subunit (RefSeq) | low | > 64 |
| Magnetospirillum magneticum AMB-1 | 0.52 | AMB_RS03090 | | tRNA guanosine(34) transglycosylase Tgt | 0.42 | AMB_RS02690 | | dihydropyrimidine dehydrogenase subunit A | low | > 64 |
| Desulfovibrio vulgaris Miyazaki F | 0.52 | DvMF_2757 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.28 | DvMF_0938 | | putative oxidoreductase (RefSeq) | low | > 51 |
| Sphingomonas koreensis DSMZ 15582 | 0.51 | Ga0059261_1017 | | tRNA-guanine transglycosylase | 0.41 | Ga0059261_1797 | | glutamate synthase small subunit family protein, proteobacterial | low | > 68 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.51 | DVU0726 | tgt | queuine tRNA-ribosyltransferase (TIGR) | 0.28 | DVU2476 | gltA | glutamate synthase, small subunit (TIGR) | low | > 55 |
| Rhizobium sp. OAE497 | 0.51 | ABIE40_RS09435 | | tRNA guanosine(34) transglycosylase Tgt | 0.29 | ABIE40_RS16270 | | glutamate synthase subunit beta | — | — |
| Sinorhizobium meliloti 1021 | 0.51 | SMc01206 | | queuine tRNA-ribosyltransferase | 0.26 | SMc04026 | | glutamate synthase | low | > 103 |
| Bosea sp. OAE506 | 0.50 | ABIE41_RS18290 | | tRNA guanosine(34) transglycosylase Tgt | 0.25 | ABIE41_RS08570 | | glutamate synthase subunit beta | — | — |
| Caulobacter crescentus NA1000 | 0.50 | CCNA_01659 | | queuine tRNA-ribosyltransferase | 0.39 | CCNA_03721 | | glutamate synthase (NADPH) small chain GltD | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.50 | CCNA_01659 | | queuine tRNA-ribosyltransferase | 0.39 | CCNA_03721 | | glutamate synthase (NADPH) small chain GltD | low | > 67 |
| Agrobacterium fabrum C58 | 0.49 | Atu1677 | | queuine tRNA-ribosyltransferase | 0.26 | Atu3783 | | glutamate synthase subunit beta | low | > 89 |
| Rhodopseudomonas palustris CGA009 | 0.49 | TX73_013485 | | tRNA guanosine(34) transglycosylase Tgt | 0.28 | TX73_004595 | | glutamate synthase subunit beta | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.49 | A4249_RS02905 | | tRNA guanosine(34) transglycosylase Tgt | 0.35 | A4249_RS16110 | | NAD(P)-dependent oxidoreductase | low | > 48 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.45 | ABZR88_RS13980 | | tRNA guanosine(34) transglycosylase Tgt | 0.25 | ABZR88_RS06910 | | glutamate synthase subunit beta | low | > 71 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.45 | Echvi_2049 | | tRNA-guanine transglycosylase, queuosine-34-forming | 0.23 | Echvi_1243 | | glutamate synthases, NADH/NADPH, small subunit | low | > 79 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.44 | CA265_RS13030 | | tRNA guanosine(34) transglycosylase Tgt | 0.26 | CA265_RS08705 | | glutamate synthase | 0.51 | 70 |
| Parabacteroides merdae CL09T00C40 | 0.44 | HMPREF1078_RS01080 | | tRNA guanosine(34) transglycosylase Tgt | 0.29 | HMPREF1078_RS11400 | | NADPH-dependent glutamate synthase | low | > 61 |
| Phocaeicola dorei CL03T12C01 | 0.43 | ABI39_RS16515 | | tRNA guanosine(34) transglycosylase Tgt | 0.23 | ABI39_RS20690 | | glutamate synthase subunit beta | low | > 72 |
| Bifidobacterium breve UCC2003 | 0.33 | BBR_RS10715 | | tRNA-guanine(34) transglycosylase | 0.27 | BBR_RS15260 | | glutamate synthase subunit beta | low | > 34 |
Not shown: 10 genomes with orthologs for Psest_1242 only; 2 genomes with orthologs for Psest_3710 only