| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Variovorax sp. SCN45 | 1.0 | GFF4449 | | TldD protein, part of TldE/TldD proteolytic complex | 1.0 | GFF2573 | | Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) | 0.90 | 16 |
| Variovorax sp. OAS795 | 0.95 | ABID97_RS06335 | | metalloprotease TldD | 0.87 | ABID97_RS07405 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.86 | Ac3H11_4036 | | TldD protein, part of TldE/TldD proteolytic complex | 0.71 | Ac3H11_3860 | | Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.85 | GFF580 | | TldD protein, part of TldE/TldD proteolytic complex | 0.67 | GFF1222 | | Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) | low | > 90 |
| Herbaspirillum seropedicae SmR1 | 0.73 | HSERO_RS07155 | | peptidase C69 | 0.48 | HSERO_RS00795 | | glycerol-3-phosphate dehydrogenase | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.73 | RR42_RS05875 | | protease TldD | 0.44 | RR42_RS01845 | | glycerol-3-phosphate dehydrogenase | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.72 | ABZR87_RS01105 | | metalloprotease TldD | 0.44 | ABZR87_RS06770 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.72 | RS_RS13315 | | metalloprotease TldD | 0.45 | RS_RS01760 | | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) | — | — |
| Burkholderia phytofirmans PsJN | 0.72 | BPHYT_RS03540 | | peptidase C69 | 0.44 | BPHYT_RS02610 | | glycerol-3-phosphate dehydrogenase [NAD(P)+] | low | > 109 |
| Ralstonia solanacearum IBSBF1503 | 0.72 | RALBFv3_RS05455 | | metalloprotease TldD | 0.44 | RALBFv3_RS10920 | | glycerol-3-phosphate dehydrogenase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.72 | UW163_RS08170 | | metalloprotease TldD | 0.44 | UW163_RS02660 | | glycerol-3-phosphate dehydrogenase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.71 | QEN71_RS26555 | | metalloprotease TldD | 0.45 | QEN71_RS01465 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | low | > 153 |
| Ralstonia solanacearum PSI07 | 0.71 | RPSI07_RS11850 | | metalloprotease TldD | 0.43 | RPSI07_RS22390 | | glycerol-3-phosphate dehydrogenase | 0.58 | 34 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.71 | H281DRAFT_04688 | | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | 0.47 | H281DRAFT_02000 | | glycerol-3-phosphate dehydrogenase (NAD(P)+) | 0.30 | 41 |
| Paraburkholderia graminis OAS925 | 0.71 | ABIE53_000851 | | TldD protein | 0.45 | ABIE53_000667 | | glycerol-3-phosphate dehydrogenase (NAD(P)+) | low | > 113 |
| Castellaniella sp019104865 MT123 | 0.70 | ABCV34_RS02590 | | metalloprotease TldD | 0.41 | ABCV34_RS14250 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | low | > 48 |
| Dechlorosoma suillum PS | 0.67 | Dsui_3401 | | putative Zn-dependent protease-like protein | 0.40 | Dsui_1277 | | glycerol-3-phosphate dehydrogenase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.62 | ABZR86_RS21715 | | metalloprotease TldD | 0.38 | ABZR86_RS13250 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.61 | OKGIIK_10280 | tldD | metalloprotease TldD | 0.40 | OKGIIK_13015 | gpsA | glycerol-3-phosphate dehydrogenase | — | — |
| Rhodanobacter denitrificans MT42 | 0.59 | LRK55_RS03145 | | metalloprotease TldD | 0.39 | LRK55_RS10550 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Alteromonas macleodii MIT1002 | 0.59 | MIT1002_00227 | | protease TldD | 0.36 | MIT1002_00485 | | Glycerol-3-phosphate dehydrogenase [NAD(P)+] | low | > 70 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.59 | Xcc-8004.1883.1 | | TldD protein, part of TldE/TldD proteolytic complex | 0.43 | Xcc-8004.271.1 | | Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.59 | LRK54_RS03395 | | metalloprotease TldD | 0.39 | LRK54_RS10860 | | NAD(P)-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Shewanella sp. ANA-3 | 0.58 | Shewana3_3641 | | microcin-processing peptidase 2 (RefSeq) | 0.35 | Shewana3_0054 | gpsA | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) | — | — |
| Pseudomonas putida KT2440 | 0.58 | PP_0940 | | putative protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD | 0.30 | PP_4169 | | Glycerol-3-phosphate dehydrogenase [NAD(P)+] | — | — |
| Lysobacter sp. OAE881 | 0.58 | ABIE51_RS06795 | | metalloprotease TldD | 0.42 | ABIE51_RS00495 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Pantoea sp. MT58 | 0.58 | IAI47_02465 | | metalloprotease TldD | 0.33 | IAI47_00740 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.58 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | 0.30 | Psyr_2022 | | Glycerol-3-phosphate dehydrogenase (NAD(P)+) | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.58 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | 0.30 | Psyr_2022 | | Glycerol-3-phosphate dehydrogenase (NAD(P)+) | low | > 86 |
| Shewanella oneidensis MR-1 | 0.57 | SO4091 | tldD | tldD protein (NCBI ptt file) | 0.35 | SO0053 | gpsA | glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI ptt file) | — | — |
| Shewanella loihica PV-4 | 0.56 | Shew_0410 | | peptidase U62, modulator of DNA gyrase (RefSeq) | 0.35 | Shew_3803 | gpsA | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) | — | — |
| Serratia liquefaciens MT49 | 0.56 | IAI46_22685 | | metalloprotease TldD | 0.34 | IAI46_24690 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.56 | AO353_05215 | | protease TldD | 0.31 | AO353_01735 | | glycerol-3-phosphate dehydrogenase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.56 | PFLU_RS04340 | | metalloprotease TldD | 0.30 | PFLU_RS09055 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.56 | PFLU_RS04340 | | metalloprotease TldD | 0.30 | PFLU_RS09055 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.56 | PS417_04285 | | protease TldD | 0.30 | PS417_09000 | | glycerol-3-phosphate dehydrogenase | — | — |
| Pseudomonas stutzeri RCH2 | 0.56 | Psest_3320 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.31 | Psest_2471 | | Glycerol-3-phosphate dehydrogenase | — | — |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS01460 | | metalloprotease TldD | 0.34 | DDA3937_RS20405 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.56 | Pf1N1B4_1092 | | TldD protein, part of TldE/TldD proteolytic complex | 0.29 | Pf1N1B4_3518 | | Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) | low | > 87 |
| Dickeya dianthicola 67-19 | 0.56 | HGI48_RS01380 | | metalloprotease TldD | 0.34 | HGI48_RS00795 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | low | > 71 |
| Pseudomonas sp. RS175 | 0.56 | PFR28_00161 | | Metalloprotease TldD | 0.31 | PFR28_03076 | | Glycerol-3-phosphate dehydrogenase [NAD(P)+] | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.55 | AO356_07095 | | protease TldD | 0.31 | AO356_19795 | | glycerol-3-phosphate dehydrogenase | low | > 104 |
| Pseudomonas sp. S08-1 | 0.55 | OH686_08580 | | TldD protein, part of TldE/TldD proteolytic complex | 0.28 | OH686_00475 | | Glycerol-3-phosphate dehydrogenase [NAD(P)+] | low | > 80 |
| Enterobacter sp. TBS_079 | 0.55 | MPMX20_04151 | | Metalloprotease TldD | 0.34 | MPMX20_00125 | | Glycerol-3-phosphate dehydrogenase [NAD(P)+] | — | — |
| Dickeya dianthicola ME23 | 0.55 | DZA65_RS01440 | | metalloprotease TldD | 0.33 | DZA65_RS00850 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.55 | Pf6N2E2_3280 | | TldD protein, part of TldE/TldD proteolytic complex | 0.30 | Pf6N2E2_5875 | | Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_5026 | | TldD protein, part of TldE/TldD proteolytic complex | 0.31 | PfGW456L13_2046 | | Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) | low | > 87 |
| Klebsiella michiganensis M5al | 0.55 | BWI76_RS25470 | | metalloprotease TldD | 0.33 | BWI76_RS27210 | | glycerol-3-phosphate dehydrogenase | — | — |
| Escherichia coli ECRC98 | 0.55 | JDDGAC_21380 | tldD | metalloprotease TldD | 0.33 | JDDGAC_19380 | gpsA | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Escherichia coli ECRC101 | 0.55 | MCAODC_08275 | tldD | metalloprotease TldD | 0.33 | MCAODC_06265 | gpsA | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Escherichia coli ECRC62 | 0.55 | BNILDI_01980 | tldD | metalloprotease TldD | 0.33 | BNILDI_03880 | gpsA | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Escherichia fergusonii Becca | 0.55 | EFB2_00586 | | Metalloprotease TldD | 0.33 | EFB2_00202 | | Glycerol-3-phosphate dehydrogenase [NAD(P)+] | — | — |
| Shewanella amazonensis SB2B | 0.55 | Sama_0474 | | TldD protein (RefSeq) | 0.35 | Sama_0063 | gpsA | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) | — | — |
| Escherichia coli ECRC99 | 0.55 | KEDOAH_10395 | tldD | metalloprotease TldD | 0.33 | KEDOAH_12395 | gpsA | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Escherichia coli ECOR38 | 0.55 | HEPCGN_16620 | tldD | metalloprotease TldD | 0.33 | HEPCGN_14595 | gpsA | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Escherichia coli ECOR27 | 0.55 | NOLOHH_09555 | tldD | metalloprotease TldD | 0.33 | NOLOHH_07635 | gpsA | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.55 | GFF2140 | | TldD protein, part of TldE/TldD proteolytic complex | 0.33 | GFF402 | | Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.55 | CSW01_02220 | | metalloprotease TldD | 0.34 | CSW01_13405 | | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) | — | — |
| Escherichia coli BW25113 | 0.55 | b3244 | tldD | predicted peptidase (NCBI) | 0.33 | b3608 | gpsA | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (NCBI) | — | — |
| Escherichia coli Nissle 1917 | 0.55 | ECOLIN_RS18595 | | metalloprotease TldD | 0.33 | ECOLIN_RS20595 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Escherichia coli ECRC102 | 0.55 | NIAGMN_15515 | tldD | metalloprotease TldD | 0.33 | NIAGMN_13515 | gpsA | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Escherichia coli BL21 | 0.55 | ECD_03104 | | putative peptidase | 0.33 | ECD_03466 | | glycerol-3-phosphate dehydrogenase (NAD+) | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.55 | OHPLBJKB_00460 | | Metalloprotease TldD | 0.33 | OHPLBJKB_00091 | | Glycerol-3-phosphate dehydrogenase [NAD(P)+] | — | — |
| Escherichia coli ECRC100 | 0.55 | OKFHMN_17755 | tldD | metalloprotease TldD | 0.33 | OKFHMN_15755 | gpsA | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS20140 | | metalloprotease TldD | 0.34 | HER17_RS20735 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | low | > 75 |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_3295 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.34 | EX28DRAFT_3859 | | Glycerol-3-phosphate dehydrogenase | — | — |
| Erwinia tracheiphila SCR3 | 0.54 | LU632_RS21420 | tldD | metalloprotease TldD | 0.32 | LU632_RS21875 | gpsA | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | low | > 74 |
| Rahnella sp. WP5 | 0.54 | EX31_RS12265 | | metalloprotease TldD | 0.33 | EX31_RS14340 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | low | > 89 |
| Rhodospirillum rubrum S1H | 0.54 | Rru_A0567 | | Peptidase U62, modulator of DNA gyrase (NCBI) | 0.34 | Rru_A3571 | | Glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI) | low | > 58 |
| Sphingomonas koreensis DSMZ 15582 | 0.54 | Ga0059261_2252 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.34 | Ga0059261_2234 | | Glycerol-3-phosphate dehydrogenase | low | > 68 |
| Azospirillum brasilense Sp245 | 0.52 | AZOBR_RS10600 | | peptidase C69 | 0.32 | AZOBR_RS00325 | | glycerol-3-phosphate dehydrogenase | 0.30 | 73 |
| Azospirillum sp. SherDot2 | 0.52 | MPMX19_00882 | | Metalloprotease TldD | 0.32 | MPMX19_02123 | | Glycerol-3-phosphate dehydrogenase [NAD(P)+] | low | > 112 |
| Kangiella aquimarina DSM 16071 | 0.52 | B158DRAFT_2072 | | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | 0.36 | B158DRAFT_0712 | | Glycerol-3-phosphate dehydrogenase | — | — |
| Rhizobium sp. OAE497 | 0.51 | ABIE40_RS04050 | | metalloprotease TldD | 0.28 | ABIE40_RS18055 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | low | > 107 |
| Caulobacter crescentus NA1000 | 0.51 | CCNA_03522 | | Zn-dependent protease TldD | 0.32 | CCNA_00068 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.51 | CCNA_03522 | | Zn-dependent protease TldD | 0.32 | CCNA_00068 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Agrobacterium fabrum C58 | 0.50 | Atu0765 | | TldD | 0.27 | Atu2650 | | glycerol-3-phosphate dehydrogenase | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.50 | SMc00960 | | hypothetical protein | 0.29 | SMc03229 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | 0.25 | 37 |
| Rhodopseudomonas palustris CGA009 | 0.50 | TX73_004255 | | metalloprotease TldD | 0.27 | TX73_001320 | | NAD(P)-dependent glycerol-3-phosphate dehydrogenase | low | > 86 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.49 | A4249_RS10860 | | metalloprotease TldD | 0.30 | A4249_RS15450 | | NAD(P)-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.49 | PGA1_c06240 | | protein TldD | 0.31 | PGA1_c35480 | | glycerol-3-phosphate dehydrogenase GpsA | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.48 | Dshi_1139 | | peptidase U62 modulator of DNA gyrase (RefSeq) | 0.29 | Dshi_3414 | | NAD-dependent glycerol-3-phosphate dehydrogenase domain protein (RefSeq) | low | > 64 |
| Parabacteroides merdae CL09T00C40 | 0.36 | HMPREF1078_RS03620 | | TldD/PmbA family protein | 0.18 | HMPREF1078_RS10070 | | glycerol-3-phosphate dehydrogenase | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.35 | BT3648 | | putative modulator of DNA gyrase (NCBI ptt file) | 0.19 | BT2123 | | glycerol-3-phosphate dehydrogenase (NCBI ptt file) | — | — |
| Bacteroides stercoris CC31F | 0.34 | HMPREF1181_RS03165 | | TldD/PmbA family protein | 0.19 | HMPREF1181_RS08570 | | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | — | — |
| Synechococcus elongatus PCC 7942 | 0.20 | Synpcc7942_1127 | tldD | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | 0.26 | Synpcc7942_2522 | | Glycerol-3-phosphate dehydrogenase (NAD(P)+) | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.07 | CA264_16655 | | TldD protein | 0.19 | CA264_05630 | | glycerol-3-phosphate dehydrogenase | low | > 74 |
Not shown: 3 genomes with orthologs for GFF4449 only; 13 genomes with orthologs for GFF2573 only