Conservation of cofitness between Psest_3813 and Psest_2579 in Pseudomonas stutzeri RCH2

87 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3813 ribonuclease PH 1.0 Psest_2579 amidophosphoribosyltransferase 0.27 4
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_0213 RNAse PH 0.92 Psyr_1668 amidophosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_0213 RNAse PH 0.92 Psyr_1668 amidophosphoribosyltransferase low > 86
Pseudomonas sp. S08-1 0.93 OH686_13570 ribonuclease PH 0.91 OH686_04420 amidophosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) 0.92 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_12500 ribonuclease PH 0.92 AO356_21465 amidophosphoribosyltransferase low > 104
Pseudomonas fluorescens SBW25 0.92 PFLU_RS29490 ribonuclease PH 0.93 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS29490 ribonuclease PH 0.93 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Pseudomonas simiae WCS417 0.92 PS417_27810 ribonuclease PH 0.93 PS417_18535 amidophosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_09260 ribonuclease PH 0.93 AO353_20690 amidophosphoribosyltransferase — —
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) 0.93 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas sp. RS175 0.91 PFR28_04420 Ribonuclease PH 0.92 PFR28_02811 Amidophosphoribosyltransferase low > 88
Pseudomonas putida KT2440 0.90 PP_5294 Ribonuclease PH 0.93 PP_2000 amidophosphoribosyl transferase low > 96
Marinobacter adhaerens HP15 0.72 HP15_300 ribonuclease PH 0.76 HP15_1821 amidophosphoribosyltransferase — —
Kangiella aquimarina DSM 16071 0.71 B158DRAFT_0588 ribonuclease PH 0.70 B158DRAFT_1488 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Alteromonas macleodii MIT1002 0.70 MIT1002_04071 Ribonuclease PH 0.63 MIT1002_02524 Amidophosphoribosyltransferase low > 70
Dickeya dadantii 3937 0.69 DDA3937_RS20540 ribonuclease PH 0.64 DDA3937_RS14435 amidophosphoribosyltransferase low > 74
Dickeya dianthicola ME23 0.69 DZA65_RS00730 ribonuclease PH 0.63 DZA65_RS15335 amidophosphoribosyltransferase low > 75
Dickeya dianthicola 67-19 0.69 HGI48_RS00675 ribonuclease PH 0.63 HGI48_RS14405 amidophosphoribosyltransferase low > 71
Xanthomonas campestris pv. campestris strain 8004 0.69 Xcc-8004.1221.1 Ribonuclease PH (EC 2.7.7.56) 0.61 Xcc-8004.4073.1 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 74
Shewanella loihica PV-4 0.68 Shew_3488 ribonuclease PH (RefSeq) 0.64 Shew_2302 amidophosphoribosyltransferase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.67 SO4256 rph ribonuclease PH (NCBI ptt file) 0.64 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.67 IAI46_24850 ribonuclease PH 0.63 IAI46_17810 amidophosphoribosyltransferase low > 86
Shewanella sp. ANA-3 0.67 Shewana3_3777 RNAse PH (RefSeq) 0.64 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.67 Sama_0320 tRNA nucleotidyltransferase (RefSeq) 0.64 Sama_2146 amidophosphoribosyltransferase (RefSeq) low > 62
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS15325 ribonuclease PH 0.60 BPHYT_RS33840 amidophosphoribosyltransferase low > 109
Rahnella sp. WP5 0.66 EX31_RS14505 ribonuclease PH 0.62 EX31_RS19570 amidophosphoribosyltransferase 0.69 57
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.62 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 78
Escherichia coli ECRC99 0.66 KEDOAH_12555 rph ribonuclease PH 0.63 KEDOAH_05480 purF amidophosphoribosyltransferase — —
Escherichia coli Nissle 1917 0.66 ECOLIN_RS20755 ribonuclease PH 0.63 ECOLIN_RS13405 amidophosphoribosyltransferase — —
Paraburkholderia graminis OAS925 0.66 ABIE53_003234 ribonuclease PH 0.60 ABIE53_004816 amidophosphoribosyltransferase — —
Escherichia coli ECRC101 0.66 OKFHMN_15590 rph ribonuclease PH 0.63 OKFHMN_22715 purF amidophosphoribosyltransferase — —
Escherichia coli ECOR38 0.66 HEPCGN_14410 rph ribonuclease PH 0.63 HEPCGN_21910 purF amidophosphoribosyltransferase low > 85
Escherichia coli ECRC101 0.66 MCAODC_06100 rph ribonuclease PH 0.63 MCAODC_13755 purF amidophosphoribosyltransferase — —
Escherichia coli ECOR27 0.66 NOLOHH_07470 rph ribonuclease PH 0.63 NOLOHH_14335 purF amidophosphoribosyltransferase low > 57
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS03645 ribonuclease PH 0.58 QEN71_RS17680 amidophosphoribosyltransferase low > 153
Escherichia coli ECRC98 0.66 JDDGAC_19215 rph ribonuclease PH 0.63 JDDGAC_26675 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC102 0.66 NIAGMN_13350 rph ribonuclease PH 0.63 NIAGMN_20485 purF amidophosphoribosyltransferase — —
Escherichia fergusonii Becca 0.66 EFB2_00170 Ribonuclease PH 0.63 EFB2_01546 Amidophosphoribosyltransferase low > 86
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_04008 RNAse PH 0.60 H281DRAFT_06060 amidophosphoribosyltransferase low > 103
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_00059 Ribonuclease PH 0.62 OHPLBJKB_01393 Amidophosphoribosyltransferase low > 73
Enterobacter sp. TBS_079 0.66 MPMX20_00092 Ribonuclease PH 0.62 MPMX20_03247 Amidophosphoribosyltransferase low > 85
Escherichia coli BL21 0.66 ECD_03500 ribonuclease PH 0.63 ECD_02237 amidophosphoribosyltransferase low > 60
Dyella japonica UNC79MFTsu3.2 0.66 ABZR86_RS11900 ribonuclease PH 0.65 ABZR86_RS06775 amidophosphoribosyltransferase low > 74
Enterobacter asburiae PDN3 0.66 EX28DRAFT_3893 ribonuclease PH 0.62 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) low > 76
Escherichia coli ECRC62 0.66 BNILDI_04045 rph ribonuclease PH 0.63 BNILDI_13255 purF amidophosphoribosyltransferase — —
Herbaspirillum seropedicae SmR1 0.66 HSERO_RS10655 ribonuclease PH 0.61 HSERO_RS16445 amidophosphoribosyltransferase — —
Acinetobacter radioresistens SK82 0.66 MPMX26_00040 Ribonuclease PH 0.72 MPMX26_01122 Amidophosphoribosyltransferase low > 36
Dechlorosoma suillum PS 0.66 Dsui_0494 ribonuclease PH 0.60 Dsui_3186 amidophosphoribosyltransferase — —
Erwinia tracheiphila SCR3 0.66 LU632_RS22020 rph ribonuclease PH 0.63 LU632_RS07865 purF amidophosphoribosyltransferase low > 74
Klebsiella michiganensis M5al 0.65 BWI76_RS27390 ribonuclease PH 0.62 BWI76_RS20350 amidophosphoribosyltransferase 0.68 10
Escherichia coli BW25113 0.65 b3643 rph ribonuclease PH (NCBI) 0.63 b2312 purF amidophosphoribosyltransferase (NCBI) low > 76
Pectobacterium carotovorum WPP14 0.65 HER17_RS20855 ribonuclease PH 0.63 HER17_RS07020 amidophosphoribosyltransferase low > 75
Lysobacter sp. OAE881 0.65 ABIE51_RS17285 ribonuclease PH 0.63 ABIE51_RS06180 amidophosphoribosyltransferase low > 62
Pantoea sp. MT58 0.65 IAI47_00595 ribonuclease PH 0.62 IAI47_06275 amidophosphoribosyltransferase 0.66 10
Ralstonia solanacearum PSI07 0.64 RPSI07_RS13840 ribonuclease PH 0.60 RPSI07_RS14765 amidophosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS03345 ribonuclease PH 0.61 RALBFv3_RS02550 amidophosphoribosyltransferase — —
Ralstonia solanacearum GMI1000 0.64 RS_RS10830 ribonuclease PH 0.60 RS_RS09930 amidophosphoribosyltransferase — —
Ralstonia solanacearum UW163 0.64 UW163_RS10375 ribonuclease PH 0.61 UW163_RS11175 amidophosphoribosyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_01115 ribonuclease PH 0.63 CSW01_05115 amidophosphoribosyltransferase low > 62
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS15255 ribonuclease PH 0.61 ABZR87_RS14465 amidophosphoribosyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF3254 Ribonuclease PH (EC 2.7.7.56) 0.58 GFF300 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Rhodanobacter denitrificans MT42 0.63 LRK55_RS11470 ribonuclease PH 0.64 LRK55_RS01105 amidophosphoribosyltransferase low > 63
Rhodanobacter sp. FW510-T8 0.63 OKGIIK_12150 rph ribonuclease PH 0.64 OKGIIK_05570 purF amidophosphoribosyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.63 LRK54_RS11745 ribonuclease PH 0.64 LRK54_RS01340 amidophosphoribosyltransferase low > 59
Rhizobium sp. OAE497 0.63 ABIE40_RS01640 ribonuclease PH 0.27 ABIE40_RS06270 amidophosphoribosyltransferase low > 107
Sinorhizobium meliloti 1021 0.62 SMc01144 ribonuclease PH 0.26 SMc00554 amidophosphoribosyltransferase low > 103
Variovorax sp. SCN45 0.61 GFF2381 Ribonuclease PH (EC 2.7.7.56) 0.56 GFF3089 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 127
Agrobacterium fabrum C58 0.61 Atu0327 ribonuclease PH 0.27 Atu1075 amidophosphoribosyltransferase — —
Variovorax sp. OAS795 0.61 ABID97_RS23640 ribonuclease PH 0.56 ABID97_RS21635 amidophosphoribosyltransferase — —
Bosea sp. OAE506 0.60 ABIE41_RS03295 ribonuclease PH 0.27 ABIE41_RS17810 amidophosphoribosyltransferase low > 77
Cupriavidus basilensis FW507-4G11 0.60 RR42_RS04890 ribonuclease PH 0.60 RR42_RS14325 amidophosphoribosyltransferase — —
Castellaniella sp019104865 MT123 0.59 ABCV34_RS03515 ribonuclease PH 0.59 ABCV34_RS04130 amidophosphoribosyltransferase — —
Azospirillum brasilense Sp245 0.58 AZOBR_RS02205 ribonuclease PH 0.28 AZOBR_RS08310 amidophosphoribosyltransferase low > 97
Rhodopseudomonas palustris CGA009 0.58 TX73_001710 ribonuclease PH 0.28 TX73_015990 amidophosphoribosyltransferase — —
Acidovorax sp. GW101-3H11 0.58 Ac3H11_3670 Ribonuclease PH (EC 2.7.7.56) 0.57 Ac3H11_2608 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 79
Dinoroseobacter shibae DFL-12 0.56 Dshi_3463 ribonuclease PH (RefSeq) 0.26 Dshi_2132 amidophosphoribosyltransferase (RefSeq) low > 64
Rhodospirillum rubrum S1H 0.56 Rru_A3641 Ribonuclease PH (NCBI) 0.27 Rru_A0404 Amidophosphoribosyl transferase (NCBI) low > 58
Phaeobacter inhibens DSM 17395 0.56 PGA1_c35030 ribonuclease PH 0.27 PGA1_c10810 amidophosphoribosyltransferase PurF low > 62
Azospirillum sp. SherDot2 0.55 MPMX19_02576 Ribonuclease PH 0.28 MPMX19_00906 Amidophosphoribosyltransferase low > 112
Bifidobacterium breve UCC2003 0.55 BBR_RS12405 ribonuclease PH 0.30 BBR_RS13380 amidophosphoribosyltransferase low > 34
Magnetospirillum magneticum AMB-1 0.55 AMB_RS22760 ribonuclease PH 0.26 AMB_RS10545 amidophosphoribosyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.53 A4249_RS13125 ribonuclease PH 0.28 A4249_RS03735 amidophosphoribosyltransferase — —
Mycobacterium tuberculosis H37Rv 0.53 Rv1340 Probable ribonuclease RphA (RNase PH) (tRNA nucleotidyltransferase) 0.27 Rv0808 Amidophosphoribosyltransferase PurF (glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (gpatase) — —
Caulobacter crescentus NA1000 0.52 CCNA_00151 ribonuclease PH 0.30 CCNA_01730 amidophosphoribosyltransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_00151 ribonuclease PH 0.30 CCNA_01730 amidophosphoribosyltransferase low > 67
Synechococcus elongatus PCC 7942 0.51 Synpcc7942_1073 rph ribonuclease PH 0.31 Synpcc7942_0004 purF amidophosphoribosyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_2741 ribonuclease PH 0.25 Ga0059261_3626 amidophosphoribosyltransferase (EC 2.4.2.14) — —

Not shown: 1 genomes with orthologs for Psest_3813 only; 8 genomes with orthologs for Psest_2579 only