Conservation of cofitness between PGA1_c26160 and PGA1_c25140 in Phaeobacter inhibens DSM 17395

89 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c26160 uvrABC system protein B 1.0 PGA1_c25140 hydroxyacylglutathione hydrolase GloB 0.39 20
Dinoroseobacter shibae DFL-12 0.86 Dshi_2192 excinuclease ABC, B subunit (RefSeq) 0.44 Dshi_2691 Hydroxyacylglutathione hydrolase (RefSeq) low > 64
Sphingomonas koreensis DSMZ 15582 0.68 Ga0059261_3779 Excinuclease ABC subunit B 0.43 Ga0059261_2759 hydroxyacylglutathione hydrolase 0.29 51
Caulobacter crescentus NA1000 0.68 CCNA_03076 excinuclease ABC subunit B 0.39 CCNA_00553 hydroxyacylglutathione hydrolase low > 66
Caulobacter crescentus NA1000 Δfur 0.68 CCNA_03076 excinuclease ABC subunit B 0.39 CCNA_00553 hydroxyacylglutathione hydrolase low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.68 A4249_RS00555 excinuclease ABC subunit UvrB 0.38 A4249_RS00300 hydroxyacylglutathione hydrolase low > 48
Azospirillum brasilense Sp245 0.65 AZOBR_RS16420 excinuclease ABC subunit B 0.49 AZOBR_RS20450 hydroxyacylglutathione hydrolase low > 97
Azospirillum sp. SherDot2 0.64 MPMX19_01038 UvrABC system protein B 0.50 MPMX19_06029 Hydroxyacylglutathione hydrolase GloB low > 112
Magnetospirillum magneticum AMB-1 0.64 AMB_RS19255 excinuclease ABC subunit UvrB 0.41 AMB_RS21210 hydroxyacylglutathione hydrolase low > 64
Rhodospirillum rubrum S1H 0.63 Rru_A1133 Excinuclease ABC, B subunit (NCBI) 0.45 Rru_A3270 Hydroxyacylglutathione hydrolase (NCBI) low > 58
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_1974 Excinuclease ABC subunit B 0.35 Psyr_1761 Hydroxyacylglutathione hydrolase low > 86
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_1974 Excinuclease ABC subunit B 0.35 Psyr_1761 Hydroxyacylglutathione hydrolase low > 86
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_21335 excinuclease ABC subunit B 0.34 AO356_24480 hydroxyacylglutathione hydrolase 0.50 17
Pseudomonas sp. S08-1 0.53 OH686_04580 excinuclease ABC subunit B 0.37 OH686_03580 hydroxyacylglutathione hydrolase low > 80
Pseudomonas aeruginosa PA14 0.53 IKLFDK_15985 excinuclease ABC subunit UvrB 0.36 IKLFDK_08815 hydroxyacylglutathione hydrolase low > 101
Pseudomonas sp. DMC3 0.53 GFF774 UvrABC system protein B 0.36 GFF1022 Hydroxyacylglutathione hydrolase GloB low > 89
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_52 Excinuclease ABC subunit B 0.34 Pf6N2E2_587 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) low > 103
Pectobacterium carotovorum WPP14 0.53 HER17_RS13420 excinuclease ABC subunit B 0.34 HER17_RS05455 hydroxyacylglutathione hydrolase low > 75
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_2341 Excinuclease ABC subunit B 0.34 B158DRAFT_1061 hydroxyacylglutathione hydrolase 0.58 19
Pseudomonas sp. SVBP6 0.53 COO64_RS05730 uvrB excinuclease ABC subunit UvrB 0.35 COO64_RS19250 gloB hydroxyacylglutathione hydrolase low > 93
Pseudomonas fluorescens SBW25 0.53 PFLU_RS20655 excinuclease ABC subunit B 0.40 PFLU_RS12910 hydroxyacylglutathione hydrolase low > 109
Serratia liquefaciens MT49 0.53 IAI46_06550 excinuclease ABC subunit B 0.31 IAI46_04135 hydroxyacylglutathione hydrolase low > 86
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS20655 excinuclease ABC subunit B 0.40 PFLU_RS12910 hydroxyacylglutathione hydrolase low > 109
Pseudomonas putida KT2440 0.53 PP_1974 excinuclease UvrABC protein B 0.36 PP_4144 Hydroxyacylglutathione hydrolase — —
Pseudomonas simiae WCS417 0.53 PS417_18685 excinuclease ABC subunit B 0.38 PS417_12220 hydroxyacylglutathione hydrolase low > 88
Pseudomonas sp. RS175 0.53 PFR28_02837 UvrABC system protein B 0.35 PFR28_01552 Hydroxyacylglutathione hydrolase GloB low > 88
Rahnella sp. WP5 0.53 EX31_RS23720 excinuclease ABC subunit B 0.26 EX31_RS21200 hydroxyacylglutathione hydrolase low > 89
Pseudomonas stutzeri RCH2 0.53 Psest_1296 excinuclease ABC, B subunit 0.35 Psest_2071 hydroxyacylglutathione hydrolase 0.24 34
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_20545 excinuclease ABC subunit B 0.35 AO353_23490 hydroxyacylglutathione hydrolase 0.27 91
Pseudomonas sp. BP01 0.52 JOY50_RS16715 uvrB excinuclease ABC subunit UvrB 0.38 JOY50_RS13455 gloB hydroxyacylglutathione hydrolase low > 84
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_05185 excinuclease ABC subunit UvrB 0.32 CSW01_11395 hydroxyacylglutathione hydrolase low > 62
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_3959 Excinuclease ABC subunit B 0.34 PfGW456L13_3340 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) low > 87
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_26 Excinuclease ABC subunit B 0.35 Pf1N1B4_4596 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) low > 87
Shewanella oneidensis MR-1 0.52 SO2506 uvrB excinuclease ABC, B subunit (NCBI ptt file) 0.28 SO2563 metallo-beta-lactamase family protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.52 Shewana3_2166 excinuclease ABC subunit B (RefSeq) 0.31 Shewana3_2369 beta-lactamase domain-containing protein (RefSeq) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF675 Excinuclease ABC subunit B 0.28 GFF4044 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) low > 78
Dickeya dadantii 3937 0.52 DDA3937_RS08530 excinuclease ABC subunit B 0.30 DDA3937_RS16060 hydroxyacylglutathione hydrolase low > 74
Dechlorosoma suillum PS 0.52 Dsui_2434 excinuclease ABC, B subunit 0.32 Dsui_2484 hydroxyacylglutathione hydrolase low > 51
Escherichia coli ECRC101 0.52 MCAODC_25595 uvrB excinuclease ABC subunit UvrB 0.29 MCAODC_00495 gloB hydroxyacylglutathione hydrolase low > 87
Escherichia coli BL21 0.52 ECD_00746 exision nuclease of nucleotide excision repair, DNA damage recognition component 0.29 ECD_00205 hydroxyacylglutathione hydrolase low > 61
Escherichia coli ECRC102 0.52 NIAGMN_04425 uvrB excinuclease ABC subunit UvrB 0.29 NIAGMN_07830 gloB hydroxyacylglutathione hydrolase — —
Escherichia coli ECRC99 0.52 KEDOAH_21530 uvrB excinuclease ABC subunit UvrB 0.29 KEDOAH_18175 gloB hydroxyacylglutathione hydrolase — —
Escherichia coli ECOR27 0.52 NOLOHH_22750 uvrB excinuclease ABC subunit UvrB 0.29 NOLOHH_02325 gloB hydroxyacylglutathione hydrolase low > 75
Escherichia coli ECRC100 0.52 OKFHMN_06380 uvrB excinuclease ABC subunit UvrB 0.29 OKFHMN_09980 gloB hydroxyacylglutathione hydrolase low > 80
Escherichia coli ECOR38 0.52 HEPCGN_01660 uvrB excinuclease ABC subunit UvrB 0.29 HEPCGN_07920 gloB hydroxyacylglutathione hydrolase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_02934 UvrABC system protein B 0.29 OHPLBJKB_03449 Hydroxyacylglutathione hydrolase GloB low > 73
Escherichia coli BW25113 0.52 b0779 uvrB excinuclease ABC subunit B (NCBI) 0.29 b0212 gloB predicted hydroxyacylglutathione hydrolase (NCBI) low > 76
Escherichia coli ECRC62 0.52 BNILDI_21020 uvrB excinuclease ABC subunit UvrB 0.29 BNILDI_09345 gloB hydroxyacylglutathione hydrolase low > 75
Escherichia coli ECRC98 0.52 JDDGAC_10015 uvrB excinuclease ABC subunit UvrB 0.29 JDDGAC_13575 gloB hydroxyacylglutathione hydrolase low > 86
Escherichia coli Nissle 1917 0.52 ECOLIN_RS04150 excinuclease ABC subunit UvrB 0.29 ECOLIN_RS01160 hydroxyacylglutathione hydrolase low > 55
Escherichia fergusonii Becca 0.52 EFB2_03326 UvrABC system protein B 0.30 EFB2_03831 Hydroxyacylglutathione hydrolase GloB low > 86
Klebsiella michiganensis M5al 0.52 BWI76_RS08785 excinuclease ABC subunit B 0.30 BWI76_RS05440 hydroxyacylglutathione hydrolase low > 92
Dickeya dianthicola ME23 0.52 DZA65_RS08990 excinuclease ABC subunit B 0.28 DZA65_RS17265 hydroxyacylglutathione hydrolase low > 75
Erwinia tracheiphila SCR3 0.52 LU632_RS09160 uvrB excinuclease ABC subunit B 0.29 LU632_RS01080 gloB hydroxyacylglutathione hydrolase low > 74
Dickeya dianthicola 67-19 0.52 HGI48_RS08695 excinuclease ABC subunit B 0.27 HGI48_RS16180 hydroxyacylglutathione hydrolase low > 71
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS09940 excinuclease ABC subunit UvrB 0.31 ABZR87_RS14165 hydroxyacylglutathione hydrolase low > 80
Ralstonia solanacearum PSI07 0.51 RPSI07_RS19240 excinuclease ABC subunit UvrB 0.33 RPSI07_RS15230 hydroxyacylglutathione hydrolase low > 81
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS14225 excinuclease ABC subunit UvrB 0.32 RALBFv3_RS02215 hydroxyacylglutathione hydrolase 0.68 21
Ralstonia solanacearum UW163 0.51 UW163_RS11690 excinuclease ABC subunit UvrB 0.32 UW163_RS15525 hydroxyacylglutathione hydrolase — —
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.2034.1 Excinuclease ABC subunit B 0.37 Xcc-8004.4036.1 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) low > 74
Ralstonia solanacearum GMI1000 0.51 RS_RS05005 UvrABC system protein B 0.33 RS_RS07605 hydroxyacylglutathione hydrolase low > 80
Enterobacter asburiae PDN3 0.51 EX28DRAFT_2211 Excinuclease ABC subunit B 0.33 EX28DRAFT_2682 hydroxyacylglutathione hydrolase 0.66 21
Shewanella amazonensis SB2B 0.51 Sama_1828 excinuclease ABC subunit B (RefSeq) 0.28 Sama_1884 hydroxyacylglutathione hydrolase (RefSeq) low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.51 GFF4962 Excinuclease ABC subunit B 0.34 GFF4257 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) low > 90
Erwinia amylovora T8 0.51 OLJFJH_16735 excinuclease ABC subunit UvrB 0.30 OLJFJH_18640 hydroxyacylglutathione hydrolase low > 58
Alteromonas macleodii MIT1002 0.51 MIT1002_01261 Excinuclease ABC subunit B 0.34 MIT1002_02494 Hydroxyacylglutathione hydrolase low > 70
Acinetobacter radioresistens SK82 0.51 MPMX26_02142 UvrABC system protein B 0.34 MPMX26_01139 Hydroxyacylglutathione hydrolase GloB low > 36
Pantoea sp. MT58 0.51 IAI47_13505 excinuclease ABC subunit B 0.30 IAI47_15340 hydroxyacylglutathione hydrolase low > 76
Castellaniella sp019104865 MT123 0.51 ABCV34_RS05110 excinuclease ABC subunit UvrB 0.34 ABCV34_RS10485 hydroxyacylglutathione hydrolase low > 48
Marinobacter adhaerens HP15 0.51 HP15_1372 excinuclease ABC subunit B 0.33 HP15_1805 hydroxyacylglutathione hydrolase low > 73
Enterobacter sp. TBS_079 0.51 MPMX20_01408 UvrABC system protein B 0.34 MPMX20_00897 Hydroxyacylglutathione hydrolase GloB low > 85
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_04973 Excinuclease ABC subunit B 0.32 H281DRAFT_04399 hydroxyacylglutathione hydrolase low > 103
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS23870 excinuclease ABC subunit UvrB 0.33 QEN71_RS04760 hydroxyacylglutathione hydrolase low > 153
Acidovorax sp. GW101-3H11 0.51 Ac3H11_4114 Excinuclease ABC subunit B 0.35 Ac3H11_478 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) low > 79
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS05995 excinuclease ABC subunit B 0.34 RR42_RS13570 hydroxyacylglutathione hydrolase low > 128
Shewanella loihica PV-4 0.51 Shew_2064 excinuclease ABC subunit B (RefSeq) 0.31 Shew_2114 hydroxyacylglutathione hydrolase (RefSeq) low > 60
Methylophilus sp. DMC18 0.51 GFF1123 UvrABC system protein B 0.34 GFF1317 Hydroxyacylglutathione hydrolase low > 43
Variovorax sp. OAS795 0.51 ABID97_RS13995 excinuclease ABC subunit UvrB 0.31 ABID97_RS14730 hydroxyacylglutathione hydrolase 0.32 83
Rhodanobacter sp000427505 FW510-R12 0.51 LRK53_RS14375 excinuclease ABC subunit UvrB 0.34 LRK53_RS12105 hydroxyacylglutathione hydrolase low > 60
Paraburkholderia graminis OAS925 0.51 ABIE53_001645 excinuclease ABC subunit B 0.34 ABIE53_003007 hydroxyacylglutathione hydrolase low > 113
Rhodanobacter denitrificans MT42 0.50 LRK55_RS13955 excinuclease ABC subunit UvrB 0.34 LRK55_RS16490 hydroxyacylglutathione hydrolase low > 63
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS14235 excinuclease ABC subunit UvrB 0.34 LRK54_RS16765 hydroxyacylglutathione hydrolase low > 59
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_03100 uvrB excinuclease ABC subunit UvrB 0.35 OKGIIK_08000 gloB hydroxyacylglutathione hydrolase low > 52
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS06905 excinuclease ABC subunit B 0.33 BPHYT_RS14210 hydroxyacylglutathione hydrolase 0.32 90
Lysobacter sp. OAE881 0.50 ABIE51_RS15310 excinuclease ABC subunit UvrB 0.32 ABIE51_RS14105 hydroxyacylglutathione hydrolase 0.80 19
Variovorax sp. SCN45 0.50 GFF945 Excinuclease ABC subunit B 0.32 GFF1118 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) low > 127
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS09750 excinuclease ABC subunit UvrB 0.37 ABZR86_RS07285 hydroxyacylglutathione hydrolase 0.77 16
Synechococcus elongatus PCC 7942 0.48 Synpcc7942_0563 uvrB excinuclease ABC subunit B 0.39 Synpcc7942_1403 Hydroxyacylglutathione hydrolase low > 38
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS15840 excinuclease ABC subunit B 0.34 HSERO_RS17120 hydroxyacylglutathione hydrolase low > 78
Synechocystis sp000284455 PCC 6803 0.47 SGL_RS14040 excinuclease ABC subunit UvrB 0.38 SGL_RS03800 hydroxyacylglutathione hydrolase low > 51

Not shown: 18 genomes with orthologs for PGA1_c26160 only; 6 genomes with orthologs for PGA1_c25140 only