Conservation of cofitness between Psest_3813 and Psest_1473 in Pseudomonas stutzeri RCH2

86 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3813 ribonuclease PH 1.0 Psest_1473 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.22 16
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_0213 RNAse PH 0.71 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_0213 RNAse PH 0.71 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase low > 86
Pseudomonas sp. S08-1 0.93 OH686_13570 ribonuclease PH 0.73 OH686_18990 phosphoribosylglycinamide formyltransferase low > 80
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) 0.71 Pf6N2E2_5728 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 103
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_2117 Ribonuclease PH (EC 2.7.7.56) 0.71 Pf1N1B4_3697 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 87
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_12500 ribonuclease PH 0.71 AO356_19085 phosphoribosylglycinamide formyltransferase low > 104
Pseudomonas fluorescens SBW25 0.92 PFLU_RS29490 ribonuclease PH 0.70 PFLU_RS22070 phosphoribosylglycinamide formyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS29490 ribonuclease PH 0.70 PFLU_RS22070 phosphoribosylglycinamide formyltransferase low > 109
Pseudomonas simiae WCS417 0.92 PS417_27810 ribonuclease PH 0.70 PS417_20125 phosphoribosylglycinamide formyltransferase low > 88
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_09260 ribonuclease PH 0.72 AO353_02685 phosphoribosylglycinamide formyltransferase low > 101
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) 0.70 PfGW456L13_4253 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 87
Pseudomonas sp. RS175 0.91 PFR28_04420 Ribonuclease PH 0.72 PFR28_03218 Phosphoribosylglycinamide formyltransferase low > 88
Pseudomonas putida KT2440 0.90 PP_5294 Ribonuclease PH 0.74 PP_1664 phosphoribosylglycinamide formyltransferase 1 low > 96
Marinobacter adhaerens HP15 0.72 HP15_300 ribonuclease PH 0.51 HP15_1298 phosphoribosylglycinamide formyltransferase low > 73
Kangiella aquimarina DSM 16071 0.71 B158DRAFT_0588 ribonuclease PH 0.50 B158DRAFT_2384 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Alteromonas macleodii MIT1002 0.70 MIT1002_04071 Ribonuclease PH 0.52 MIT1002_02220 Phosphoribosylglycinamide formyltransferase low > 70
Dickeya dadantii 3937 0.69 DDA3937_RS20540 ribonuclease PH 0.51 DDA3937_RS06020 phosphoribosylglycinamide formyltransferase low > 74
Dickeya dianthicola ME23 0.69 DZA65_RS00730 ribonuclease PH 0.52 DZA65_RS06415 phosphoribosylglycinamide formyltransferase low > 75
Dickeya dianthicola 67-19 0.69 HGI48_RS00675 ribonuclease PH 0.52 HGI48_RS06065 phosphoribosylglycinamide formyltransferase low > 71
Xanthomonas campestris pv. campestris strain 8004 0.69 Xcc-8004.1221.1 Ribonuclease PH (EC 2.7.7.56) 0.34 Xcc-8004.1673.1 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 74
Shewanella loihica PV-4 0.68 Shew_3488 ribonuclease PH (RefSeq) 0.51 Shew_1512 phosphoribosylglycinamide formyltransferase (RefSeq) low > 60
Shewanella sp. ANA-3 0.67 Shewana3_3777 RNAse PH (RefSeq) 0.52 Shewana3_2546 purN phosphoribosylglycinamide formyltransferase (RefSeq) low > 73
Serratia liquefaciens MT49 0.67 IAI46_24850 ribonuclease PH 0.54 IAI46_18890 phosphoribosylglycinamide formyltransferase low > 86
Shewanella oneidensis MR-1 0.67 SO4256 rph ribonuclease PH (NCBI ptt file) 0.51 SO2761 purN phosphoribosylglycinamide formyltransferase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.67 Sama_0320 tRNA nucleotidyltransferase (RefSeq) 0.53 Sama_2098 purN phosphoribosylglycinamide formyltransferase (RefSeq) low > 62
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS15325 ribonuclease PH 0.49 BPHYT_RS15670 phosphoribosylglycinamide formyltransferase low > 109
Rahnella sp. WP5 0.66 EX31_RS14505 ribonuclease PH 0.53 EX31_RS22690 phosphoribosylglycinamide formyltransferase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.60 GFF2168 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 78
Escherichia coli ECRC101 0.66 MCAODC_06100 rph ribonuclease PH 0.60 MCAODC_12335 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC102 0.66 NIAGMN_13350 rph ribonuclease PH 0.60 NIAGMN_19575 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECOR38 0.66 HEPCGN_14410 rph ribonuclease PH 0.60 HEPCGN_20970 purN phosphoribosylglycinamide formyltransferase low > 85
Escherichia fergusonii Becca 0.66 EFB2_00170 Ribonuclease PH 0.60 EFB2_01398 Phosphoribosylglycinamide formyltransferase low > 86
Escherichia coli ECRC101 0.66 OKFHMN_15590 rph ribonuclease PH 0.60 OKFHMN_21805 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli Nissle 1917 0.66 ECOLIN_RS20755 ribonuclease PH 0.60 ECOLIN_RS14195 phosphoribosylglycinamide formyltransferase low > 52
Escherichia coli ECRC99 0.66 KEDOAH_12555 rph ribonuclease PH 0.60 KEDOAH_06415 purN phosphoribosylglycinamide formyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_04008 RNAse PH 0.45 H281DRAFT_04075 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase low > 103
Paraburkholderia graminis OAS925 0.66 ABIE53_003234 ribonuclease PH 0.49 ABIE53_003298 phosphoribosylglycinamide formyltransferase-1 low > 113
Escherichia coli ECOR27 0.66 NOLOHH_07470 rph ribonuclease PH 0.60 NOLOHH_13455 purN phosphoribosylglycinamide formyltransferase low > 57
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS03645 ribonuclease PH 0.49 QEN71_RS03040 phosphoribosylglycinamide formyltransferase low > 153
Escherichia coli ECRC98 0.66 JDDGAC_19215 rph ribonuclease PH 0.60 JDDGAC_25750 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC62 0.66 BNILDI_04045 rph ribonuclease PH 0.60 BNILDI_12265 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli BL21 0.66 ECD_03500 ribonuclease PH 0.60 ECD_02392 phosphoribosylglycinamide formyltransferase 1 low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_00059 Ribonuclease PH 0.60 OHPLBJKB_01226 Phosphoribosylglycinamide formyltransferase low > 73
Dyella japonica UNC79MFTsu3.2 0.66 ABZR86_RS11900 ribonuclease PH 0.40 ABZR86_RS19860 phosphoribosylglycinamide formyltransferase low > 74
Enterobacter asburiae PDN3 0.66 EX28DRAFT_3893 ribonuclease PH 0.58 EX28DRAFT_0167 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_00092 Ribonuclease PH 0.60 MPMX20_03355 Phosphoribosylglycinamide formyltransferase 0.26 2
Herbaspirillum seropedicae SmR1 0.66 HSERO_RS10655 ribonuclease PH 0.50 HSERO_RS05910 phosphoribosylglycinamide formyltransferase low > 78
Erwinia tracheiphila SCR3 0.66 LU632_RS22020 rph ribonuclease PH 0.51 LU632_RS08270 purN phosphoribosylglycinamide formyltransferase low > 74
Acinetobacter radioresistens SK82 0.66 MPMX26_00040 Ribonuclease PH 0.46 MPMX26_02207 Phosphoribosylglycinamide formyltransferase low > 36
Dechlorosoma suillum PS 0.66 Dsui_0494 ribonuclease PH 0.50 Dsui_1545 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Klebsiella michiganensis M5al 0.65 BWI76_RS27390 ribonuclease PH 0.59 BWI76_RS20970 phosphoribosylglycinamide formyltransferase low > 92
Pectobacterium carotovorum WPP14 0.65 HER17_RS20855 ribonuclease PH 0.50 HER17_RS15470 phosphoribosylglycinamide formyltransferase low > 75
Escherichia coli BW25113 0.65 b3643 rph ribonuclease PH (NCBI) 0.60 b2500 purN phosphoribosylglycinamide formyltransferase (NCBI) low > 76
Lysobacter sp. OAE881 0.65 ABIE51_RS17285 ribonuclease PH 0.35 ABIE51_RS15895 phosphoribosylglycinamide formyltransferase low > 62
Pantoea sp. MT58 0.65 IAI47_00595 ribonuclease PH 0.55 IAI47_05175 phosphoribosylglycinamide formyltransferase low > 76
Ralstonia solanacearum PSI07 0.64 RPSI07_RS13840 ribonuclease PH 0.52 RPSI07_RS12625 phosphoribosylglycinamide formyltransferase — —
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS03345 ribonuclease PH 0.52 RALBFv3_RS04760 phosphoribosylglycinamide formyltransferase — —
Ralstonia solanacearum UW163 0.64 UW163_RS10375 ribonuclease PH 0.52 UW163_RS08910 phosphoribosylglycinamide formyltransferase — —
Ralstonia solanacearum GMI1000 0.64 RS_RS10830 ribonuclease PH 0.52 RS_RS12320 phosphoribosylglycinamide formyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_01115 ribonuclease PH 0.55 CSW01_11355 phosphoribosylglycinamide formyltransferase low > 62
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS15255 ribonuclease PH 0.49 ABZR87_RS00380 phosphoribosylglycinamide formyltransferase — —
Rhodanobacter denitrificans MT42 0.63 LRK55_RS11470 ribonuclease PH 0.42 LRK55_RS12640 phosphoribosylglycinamide formyltransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.63 LRK54_RS11745 ribonuclease PH 0.42 LRK54_RS12940 phosphoribosylglycinamide formyltransferase low > 59
Rhizobium sp. OAE497 0.63 ABIE40_RS01640 ribonuclease PH 0.43 ABIE40_RS06555 phosphoribosylglycinamide formyltransferase low > 107
Rhodanobacter sp. FW510-T8 0.63 OKGIIK_12150 rph ribonuclease PH 0.39 OKGIIK_02310 purN phosphoribosylglycinamide formyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF3254 Ribonuclease PH (EC 2.7.7.56) 0.42 GFF767 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 90
Sinorhizobium meliloti 1021 0.62 SMc01144 ribonuclease PH 0.43 SMc00614 phosphoribosylglycinamide formyltransferase low > 103
Variovorax sp. SCN45 0.61 GFF2381 Ribonuclease PH (EC 2.7.7.56) 0.42 GFF6047 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 127
Agrobacterium fabrum C58 0.61 Atu0327 ribonuclease PH 0.37 Atu1140 phosphoribosyalaminoimidazole-succinocarboxamide synthase — —
Variovorax sp. OAS795 0.61 ABID97_RS23640 ribonuclease PH 0.42 ABID97_RS07775 phosphoribosylglycinamide formyltransferase low > 91
Cupriavidus basilensis FW507-4G11 0.60 RR42_RS04890 ribonuclease PH 0.46 RR42_RS17050 phosphoribosylglycinamide formyltransferase low > 128
Castellaniella sp019104865 MT123 0.59 ABCV34_RS03515 ribonuclease PH 0.45 ABCV34_RS05225 phosphoribosylglycinamide formyltransferase — —
Azospirillum brasilense Sp245 0.58 AZOBR_RS02205 ribonuclease PH 0.45 AZOBR_RS16295 phosphoribosylglycinamide formyltransferase low > 97
Rhodopseudomonas palustris CGA009 0.58 TX73_001710 ribonuclease PH 0.36 TX73_015790 phosphoribosylglycinamide formyltransferase — —
Acidovorax sp. GW101-3H11 0.58 Ac3H11_3670 Ribonuclease PH (EC 2.7.7.56) 0.42 Ac3H11_1709 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Dinoroseobacter shibae DFL-12 0.56 Dshi_3463 ribonuclease PH (RefSeq) 0.46 Dshi_1888 phosphoribosylglycinamide formyltransferase (RefSeq) low > 64
Rhodospirillum rubrum S1H 0.56 Rru_A3641 Ribonuclease PH (NCBI) 0.49 Rru_A2168 Phosphoribosylglycinamide formyltransferase (NCBI) — —
Phaeobacter inhibens DSM 17395 0.56 PGA1_c35030 ribonuclease PH 0.44 PGA1_c13270 phosphoribosylglycinamide formyltransferase PurN low > 62
Azospirillum sp. SherDot2 0.55 MPMX19_02576 Ribonuclease PH 0.44 MPMX19_01305 Phosphoribosylglycinamide formyltransferase — —
Magnetospirillum magneticum AMB-1 0.55 AMB_RS22760 ribonuclease PH 0.42 AMB_RS14335 phosphoribosylglycinamide formyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.53 A4249_RS13125 ribonuclease PH 0.34 A4249_RS08220 phosphoribosylglycinamide formyltransferase low > 48
Mycobacterium tuberculosis H37Rv 0.53 Rv1340 Probable ribonuclease RphA (RNase PH) (tRNA nucleotidyltransferase) 0.23 Rv0956 Probable 5'-phosphoribosylglycinamide formyltransferase PurN (GART) (gar transformylase) (5'-phosphoribosylglycinamide transformylase) — —
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_00151 ribonuclease PH 0.36 CCNA_01774 phosphoribosylglycinamide formyltransferase low > 67
Caulobacter crescentus NA1000 0.52 CCNA_00151 ribonuclease PH 0.36 CCNA_01774 phosphoribosylglycinamide formyltransferase low > 66
Synechococcus elongatus PCC 7942 0.51 Synpcc7942_1073 rph ribonuclease PH 0.31 Synpcc7942_0958 purN phosphoribosylglycinamide formyltransferase low > 38
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_2741 ribonuclease PH 0.32 Ga0059261_0229 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —

Not shown: 2 genomes with orthologs for Psest_3813 only; 12 genomes with orthologs for Psest_1473 only