| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Phaeobacter inhibens DSM 17395 | 1.0 | PGA1_c25150 | | ATP-dependent Clp protease ATP-binding subunit | 1.0 | PGA1_c11700 | | 5,10-methylenetetrahydrofolate reductase MetF | 0.41 | 14 |
| Dinoroseobacter shibae DFL-12 | 0.87 | Dshi_2939 | | ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) | 0.67 | Dshi_2080 | | 5,10-methylenetetrahydrofolate reductase (RefSeq) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.73 | TX73_016270 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.38 | TX73_019175 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 86 |
| Caulobacter crescentus NA1000 | 0.73 | CCNA_02553 | | ATP-dependent clp protease ATP-binding subunit ClpA | 0.40 | CCNA_02224 | | methylenetetrahydrofolate reductase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.73 | CCNA_02553 | | ATP-dependent clp protease ATP-binding subunit ClpA | 0.40 | CCNA_02224 | | methylenetetrahydrofolate reductase | low | > 67 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.72 | A4249_RS08390 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.39 | A4249_RS07925 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.89 | 41 |
| Bosea sp. OAE506 | 0.72 | ABIE41_RS18235 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.46 | ABIE41_RS12475 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.32 | 75 |
| Rhizobium sp. OAE497 | 0.71 | ABIE40_RS08865 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.42 | ABIE40_RS11950 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.58 | 54 |
| Azospirillum sp. SherDot2 | 0.71 | MPMX19_00503 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.45 | MPMX19_00635 | | 5,10-methylenetetrahydrofolate reductase | low | > 112 |
| Rhodospirillum rubrum S1H | 0.71 | Rru_A2109 | | ATP-dependent Clp protease ATP-binding subunit ClpA (NCBI) | 0.45 | Rru_A1530 | | 5,10-methylenetetrahydrofolate reductase (NCBI) | low | > 58 |
| Azospirillum brasilense Sp245 | 0.71 | AZOBR_RS05175 | | ATP-dependent Clp protease ATP-binding protein | 0.45 | AZOBR_RS09540 | | 5 10-methylenetetrahydrofolate reductase | low | > 97 |
| Sinorhizobium meliloti 1021 | 0.71 | SMc02109 | | ATP-dependent Clp protease ATP-binding subunit protein | 0.39 | SMc01843 | | 5,10-methylenetetrahydrofolate reductase | — | — |
| Magnetospirillum magneticum AMB-1 | 0.70 | AMB_RS05705 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.43 | AMB_RS02230 | | methylenetetrahydrofolate reductase | — | — |
| Agrobacterium fabrum C58 | 0.69 | Atu1364 | | ATP-dependent Clp protease, ATP-binding subunit | 0.39 | Atu2123 | | methylenetetrahydrofolate reductase | low | > 89 |
| Sphingomonas koreensis DSMZ 15582 | 0.68 | Ga0059261_1001 | | ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) | 0.47 | Ga0059261_0992 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | low | > 68 |
| Dechlorosoma suillum PS | 0.60 | Dsui_0009 | | ATP-dependent Clp protease ATP-binding subunit clpA | 0.33 | Dsui_0640 | | 5,10-methylenetetrahydrofolate reductase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.60 | HSERO_RS07030 | | ATP-dependent Clp protease ATP-binding protein | 0.31 | HSERO_RS21425 | | 5,10-methylenetetrahydrofolate reductase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.59 | Xcc-8004.2754.1 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.33 | Xcc-8004.4336.1 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 74 |
| Ralstonia solanacearum GMI1000 | 0.59 | RS_RS12370 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.36 | RS_RS00460 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
| Lysobacter sp. OAE881 | 0.59 | ABIE51_RS11490 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.34 | ABIE51_RS16490 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 62 |
| Marinobacter adhaerens HP15 | 0.59 | HP15_2080 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.34 | HP15_2917 | | 5,10-methylenetetrahydrofolate reductase-like protein | low | > 73 |
| Ralstonia sp. UNC404CL21Col | 0.59 | ABZR87_RS00435 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.35 | ABZR87_RS04865 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.59 | 8 |
| Pseudomonas simiae WCS417 | 0.59 | PS417_16510 | | Clp protease ClpX | 0.31 | PS417_26510 | | 5,10-methylenetetrahydrofolate reductase | low | > 88 |
| Pseudomonas sp. RS175 | 0.59 | PFR28_02613 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.30 | PFR28_04202 | | 5,10-methylenetetrahydrofolate reductase | low | > 88 |
| Ralstonia solanacearum IBSBF1503 | 0.59 | RALBFv3_RS04810 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.35 | RALBFv3_RS09875 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
| Ralstonia solanacearum UW163 | 0.59 | UW163_RS08860 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.35 | UW163_RS03705 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
| Escherichia coli ECRC101 | 0.58 | OKFHMN_05785 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.41 | OKFHMN_13665 | metF | methylenetetrahydrofolate reductase | — | — |
| Escherichia coli ECOR27 | 0.58 | NOLOHH_22180 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.41 | NOLOHH_05810 | metF | methylenetetrahydrofolate reductase | low | > 57 |
| Escherichia coli BW25113 | 0.58 | b0882 | clpA | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI) | 0.41 | b3941 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.58 | NIAGMN_03825 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.41 | NIAGMN_11420 | metF | methylenetetrahydrofolate reductase | — | — |
| Escherichia fergusonii Becca | 0.58 | EFB2_03179 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.41 | EFB2_04672 | | 5,10-methylenetetrahydrofolate reductase | low | > 86 |
| Escherichia coli ECOR38 | 0.58 | HEPCGN_22900 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.41 | HEPCGN_12310 | metF | methylenetetrahydrofolate reductase | 0.75 | 63 |
| Escherichia coli ECRC62 | 0.58 | BNILDI_20435 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.41 | BNILDI_05725 | metF | methylenetetrahydrofolate reductase | — | — |
| Escherichia coli ECRC101 | 0.58 | MCAODC_25000 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.41 | MCAODC_04165 | metF | methylenetetrahydrofolate reductase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.58 | OHPLBJKB_02786 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.41 | OHPLBJKB_04109 | | 5,10-methylenetetrahydrofolate reductase | low | > 73 |
| Ralstonia solanacearum PSI07 | 0.58 | RPSI07_RS12575 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.36 | RPSI07_RS23495 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.46 | 55 |
| Escherichia coli ECRC98 | 0.58 | JDDGAC_09420 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.41 | JDDGAC_17290 | metF | methylenetetrahydrofolate reductase | — | — |
| Escherichia coli Nissle 1917 | 0.58 | ECOLIN_RS04695 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.41 | ECOLIN_RS22760 | | methylenetetrahydrofolate reductase | low | > 52 |
| Dyella japonica UNC79MFTsu3.2 | 0.58 | ABZR86_RS02200 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.37 | ABZR86_RS11570 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 74 |
| Escherichia coli ECRC99 | 0.58 | KEDOAH_22125 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.41 | KEDOAH_14495 | metF | methylenetetrahydrofolate reductase | — | — |
| Enterobacter asburiae PDN3 | 0.58 | EX28DRAFT_2050 | | ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) | 0.41 | EX28DRAFT_4413 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | 0.71 | 33 |
| Pectobacterium carotovorum WPP14 | 0.58 | HER17_RS12400 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.41 | HER17_RS00950 | | methylenetetrahydrofolate reductase | low | > 75 |
| Klebsiella michiganensis M5al | 0.58 | BWI76_RS09615 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.41 | BWI76_RS00805 | | 5,10-methylenetetrahydrofolate reductase | low | > 92 |
| Escherichia coli BL21 | 0.58 | ECD_00887 | | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity | 0.41 | ECD_03827 | | 5,10-methylenetetrahydrofolate reductase | low | > 60 |
| Kangiella aquimarina DSM 16071 | 0.58 | B158DRAFT_1505 | | ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) | 0.40 | B158DRAFT_2461 | | 5,10-methylenetetrahydrofolate reductase (NAD(P)) (EC 1.5.1.20) | low | > 40 |
| Dickeya dadantii 3937 | 0.58 | DDA3937_RS09560 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.41 | DDA3937_RS00960 | | methylenetetrahydrofolate reductase | low | > 74 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.58 | Psyr_3183 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.30 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.58 | Psyr_3183 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.30 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | low | > 86 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.58 | GFF4521 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.31 | GFF1692 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.58 | GFF4901 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.41 | GFF2329 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.58 | MPMX20_01544 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.41 | MPMX20_04529 | | 5,10-methylenetetrahydrofolate reductase | 0.33 | 51 |
| Pseudomonas sp. S08-1 | 0.58 | OH686_00235 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.31 | OH686_10820 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 80 |
| Pseudomonas fluorescens SBW25-INTG | 0.58 | PFLU_RS18550 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.31 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 109 |
| Dickeya dianthicola ME23 | 0.58 | DZA65_RS09885 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.40 | DZA65_RS21460 | | methylenetetrahydrofolate reductase | low | > 75 |
| Pseudomonas fluorescens SBW25 | 0.58 | PFLU_RS18550 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.31 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.59 | 99 |
| Alteromonas macleodii MIT1002 | 0.58 | MIT1002_01834 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.38 | MIT1002_03670 | | 5,10-methylenetetrahydrofolate reductase | low | > 70 |
| Dickeya dianthicola 67-19 | 0.58 | HGI48_RS09575 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.40 | HGI48_RS20415 | | methylenetetrahydrofolate reductase | low | > 71 |
| Pseudomonas stutzeri RCH2 | 0.58 | Psest_2027 | | ATP-dependent Clp protease ATP-binding subunit clpA | 0.32 | Psest_0313 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | 0.46 | 8 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.58 | H281DRAFT_04082 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.34 | H281DRAFT_05801 | | 5,10-methylenetetrahydrofolate reductase (NAD(P)) | 0.45 | 14 |
| Variovorax sp. SCN45 | 0.58 | GFF341 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.28 | GFF2055 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 127 |
| Rhodanobacter denitrificans FW104-10B01 | 0.58 | LRK54_RS00420 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.36 | LRK54_RS12030 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 59 |
| Burkholderia phytofirmans PsJN | 0.58 | BPHYT_RS15710 | | ATP-dependent Clp protease ATP-binding protein | 0.34 | BPHYT_RS18705 | | 5,10-methylenetetrahydrofolate reductase | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.58 | PfGW456L13_2646 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.30 | PfGW456L13_1050 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.58 | AO353_27675 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.30 | AO353_08015 | | 5,10-methylenetetrahydrofolate reductase | low | > 101 |
| Acidovorax sp. GW101-3H11 | 0.58 | Ac3H11_2456 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.30 | Ac3H11_3045 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 79 |
| Pseudomonas putida KT2440 | 0.58 | PP_4008 | | ATP-dependent serine protease | 0.31 | PP_4977 | | 5,10-methylenetetrahydrofolate reductase | low | > 96 |
| Pseudomonas fluorescens FW300-N2C3 | 0.58 | AO356_22150 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.30 | AO356_13605 | | 5,10-methylenetetrahydrofolate reductase | low | > 104 |
| Rhodanobacter denitrificans MT42 | 0.58 | LRK55_RS00160 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.36 | LRK55_RS11765 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 63 |
| Pseudomonas fluorescens FW300-N1B4 | 0.58 | Pf1N1B4_4055 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.30 | Pf1N1B4_2384 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 87 |
| Paraburkholderia sabiae LMG 24235 | 0.58 | QEN71_RS03005 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.35 | QEN71_RS28715 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 153 |
| Cupriavidus basilensis FW507-4G11 | 0.58 | RR42_RS17105 | | Clp protease ClpX | 0.35 | RR42_RS01385 | | 5,10-methylenetetrahydrofolate reductase | low | > 128 |
| Pseudomonas fluorescens FW300-N2E2 | 0.58 | Pf6N2E2_292 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.30 | Pf6N2E2_4638 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 103 |
| Vibrio cholerae E7946 ATCC 55056 | 0.58 | CSW01_05805 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.41 | CSW01_13560 | | methylenetetrahydrofolate reductase | low | > 62 |
| Variovorax sp. OAS795 | 0.57 | ABID97_RS16910 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.29 | ABID97_RS25015 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 91 |
| Rahnella sp. WP5 | 0.57 | EX31_RS18560 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.41 | EX31_RS14205 | | methylenetetrahydrofolate reductase | 0.47 | 67 |
| Rhodanobacter sp. FW510-T8 | 0.57 | OKGIIK_06890 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.35 | OKGIIK_11830 | metF | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 52 |
| Shewanella loihica PV-4 | 0.57 | Shew_1566 | | ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) | 0.39 | Shew_0522 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.66 | 25 |
| Pantoea sp. MT58 | 0.57 | IAI47_12945 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.40 | IAI47_00890 | | methylenetetrahydrofolate reductase | low | > 76 |
| Shewanella sp. ANA-3 | 0.57 | Shewana3_1753 | | ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) | 0.40 | Shewana3_3612 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | low | > 73 |
| Serratia liquefaciens MT49 | 0.57 | IAI46_08515 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.40 | IAI46_24530 | | methylenetetrahydrofolate reductase | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.57 | LU632_RS09705 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.39 | LU632_RS19630 | metF | methylenetetrahydrofolate reductase | low | > 74 |
| Shewanella oneidensis MR-1 | 0.57 | SO2626 | clpA | ATP-dependent Clp protease, ATP-binding subunit ClpA (NCBI ptt file) | 0.40 | SO4054 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) | 0.77 | 31 |
| Shewanella amazonensis SB2B | 0.56 | Sama_2056 | | ATP-dependent Clp protease, ATP-binding subunit ClpA (RefSeq) | 0.40 | Sama_3169 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.80 | 3 |
| Castellaniella sp019104865 MT123 | 0.56 | ABCV34_RS05305 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.32 | ABCV34_RS13550 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 48 |
| Acinetobacter radioresistens SK82 | 0.55 | MPMX26_01284 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.31 | MPMX26_01002 | | 5,10-methylenetetrahydrofolate reductase | low | > 36 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.51 | DVU1602 | clpA | ATP-dependent Clp protease, ATP-binding subunit ClpA (TIGR) | 0.27 | DVU0997 | metF | 5,10-methylenetetrahydrofolate reductase (TIGR) | low | > 55 |
| Desulfovibrio vulgaris Miyazaki F | 0.50 | DvMF_0458 | | ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) | 0.26 | DvMF_3034 | | 5,10-methylenetetrahydrofolate reductase (RefSeq) | — | — |
| Phocaeicola dorei CL03T12C01 | 0.38 | ABI39_RS03345 | | AAA family ATPase | 0.21 | ABI39_RS09240 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.37 | HMPREF1058_RS09040 | | AAA family ATPase | 0.21 | HMPREF1058_RS13650 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 67 |
Not shown: 0 genomes with orthologs for PGA1_c25150 only; 11 genomes with orthologs for PGA1_c11700 only