| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dechlorosoma suillum PS | 1.0 | Dsui_0311 | | ATP-dependent DNA helicase RecG | 1.0 | Dsui_2470 | | excinuclease ABC, C subunit | 0.84 | 8 |
| Ralstonia solanacearum IBSBF1503 | 0.59 | RALBFv3_RS05675 | | DNA helicase RecG | 0.50 | RALBFv3_RS14525 | | excinuclease ABC subunit UvrC | low | > 76 |
| Ralstonia solanacearum UW163 | 0.59 | UW163_RS07950 | | DNA helicase RecG | 0.50 | UW163_RS11990 | | excinuclease ABC subunit UvrC | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.59 | RR42_RS17390 | | ATP-dependent DNA helicase RecG | 0.50 | RR42_RS14000 | | excinuclease ABC subunit C | 0.36 | 57 |
| Ralstonia sp. UNC404CL21Col | 0.59 | ABZR87_RS01270 | | ATP-dependent DNA helicase RecG | 0.52 | ABZR87_RS10245 | | excinuclease ABC subunit UvrC | 0.71 | 2 |
| Ralstonia solanacearum PSI07 | 0.58 | RPSI07_RS11625 | | DNA helicase RecG | 0.51 | RPSI07_RS18935 | | excinuclease ABC subunit UvrC | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.58 | RS_RS13565 | | DNA helicase RecG | 0.51 | RS_RS05305 | | excinuclease ABC subunit UvrC | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.56 | QEN71_RS26630 | | ATP-dependent DNA helicase RecG | 0.45 | QEN71_RS04665 | | excinuclease ABC subunit UvrC | — | — |
| Herbaspirillum seropedicae SmR1 | 0.56 | HSERO_RS06165 | | ATP-dependent DNA helicase RecG | 0.52 | HSERO_RS09690 | | excinuclease ABC subunit C | 0.52 | 19 |
| Acidovorax sp. GW101-3H11 | 0.51 | Ac3H11_781 | | ATP-dependent DNA helicase RecG (EC 3.6.1.-) | 0.46 | Ac3H11_373 | | Excinuclease ABC subunit C | low | > 79 |
| Variovorax sp. OAS795 | 0.50 | ABID97_RS01575 | | ATP-dependent DNA helicase RecG | 0.46 | ABID97_RS10635 | | excinuclease ABC subunit UvrC | low | > 91 |
| Castellaniella sp019104865 MT123 | 0.49 | ABCV34_RS03570 | | ATP-dependent DNA helicase RecG | 0.49 | ABCV34_RS06980 | | excinuclease ABC subunit UvrC | low | > 48 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.49 | GFF2802 | | ATP-dependent DNA helicase RecG (EC 3.6.1.-) | 0.46 | GFF3847 | | Excinuclease ABC subunit C | — | — |
| Variovorax sp. SCN45 | 0.48 | GFF5538 | | ATP-dependent DNA helicase RecG (EC 3.6.4.12) | 0.46 | GFF2859 | | Excinuclease ABC subunit C | low | > 127 |
| Pseudomonas fluorescens FW300-N1B4 | 0.46 | Pf1N1B4_2105 | | ATP-dependent DNA helicase RecG (EC 3.6.1.-) | 0.48 | Pf1N1B4_5618 | | Excinuclease ABC subunit C | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.46 | Psest_4192 | | ATP-dependent DNA helicase RecG | 0.50 | Psest_2259 | | excinuclease ABC, C subunit | — | — |
| Pseudomonas putida KT2440 | 0.46 | PP_5310 | | junction-specific ATP-dependent DNA helicase | 0.51 | PP_4098 | | UvrABC system protein C | 0.28 | 85 |
| Acinetobacter radioresistens SK82 | 0.46 | MPMX26_02732 | | ATP-dependent DNA helicase RecG | 0.42 | MPMX26_00228 | | UvrABC system protein C | low | > 36 |
| Pseudomonas fluorescens GW456-L13 | 0.45 | PfGW456L13_772 | | ATP-dependent DNA helicase RecG (EC 3.6.1.-) | 0.48 | PfGW456L13_2886 | | Excinuclease ABC subunit C | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.45 | PFLU_RS29550 | | ATP-dependent DNA helicase RecG | 0.49 | PFLU_RS10770 | | excinuclease ABC subunit UvrC | 0.29 | 104 |
| Pseudomonas fluorescens SBW25 | 0.45 | PFLU_RS29550 | | ATP-dependent DNA helicase RecG | 0.49 | PFLU_RS10770 | | excinuclease ABC subunit UvrC | low | > 109 |
| Lysobacter sp. OAE881 | 0.45 | ABIE51_RS17230 | | ATP-dependent DNA helicase RecG | 0.46 | ABIE51_RS12455 | | excinuclease ABC subunit UvrC | 0.89 | 3 |
| Pseudomonas fluorescens FW300-N2E3 | 0.45 | AO353_09320 | | ATP-dependent DNA helicase RecG | 0.48 | AO353_21835 | | excinuclease ABC subunit C | 0.49 | 16 |
| Pseudomonas simiae WCS417 | 0.45 | PS417_27870 | | ATP-dependent DNA helicase RecG | 0.49 | PS417_10725 | | excinuclease ABC subunit C | low | > 88 |
| Pseudomonas syringae pv. syringae B728a | 0.45 | Psyr_0201 | | ATP-dependent DNA helicase RecG | 0.49 | Psyr_2896 | | Excinuclease ABC subunit C | 0.48 | 7 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.45 | Psyr_0201 | | ATP-dependent DNA helicase RecG | 0.49 | Psyr_2896 | | Excinuclease ABC subunit C | 0.50 | 13 |
| Pseudomonas sp. S08-1 | 0.45 | OH686_13505 | | ATP-dependent DNA helicase RecG | 0.48 | OH686_00340 | | excinuclease ABC subunit C | low | > 80 |
| Pseudomonas sp. RS175 | 0.45 | PFR28_04435 | | ATP-dependent DNA helicase RecG | 0.47 | PFR28_01411 | | UvrABC system protein C | 0.25 | 40 |
| Pseudomonas fluorescens FW300-N2C3 | 0.45 | AO356_12380 | | ATP-dependent DNA helicase RecG | 0.48 | AO356_00350 | | excinuclease ABC subunit C | 0.32 | 63 |
| Pseudomonas fluorescens FW300-N2E2 | 0.45 | Pf6N2E2_4352 | | ATP-dependent DNA helicase RecG (EC 3.6.1.-) | 0.47 | Pf6N2E2_2021 | | Excinuclease ABC subunit C | 0.36 | 25 |
| Dyella japonica UNC79MFTsu3.2 | 0.44 | ABZR86_RS11840 | | ATP-dependent DNA helicase RecG | 0.46 | ABZR86_RS02245 | | excinuclease ABC subunit UvrC | 0.92 | 5 |
| Shewanella loihica PV-4 | 0.44 | Shew_3507 | | ATP-dependent DNA helicase RecG (RefSeq) | 0.44 | Shew_1825 | uvrC | excinuclease ABC subunit C (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.44 | Shewana3_0348 | | ATP-dependent DNA helicase RecG (RefSeq) | 0.44 | Shewana3_1609 | uvrC | excinuclease ABC subunit C (RefSeq) | low | > 73 |
| Rhodanobacter denitrificans FW104-10B01 | 0.44 | LRK54_RS11805 | | ATP-dependent DNA helicase RecG | 0.49 | LRK54_RS00380 | | excinuclease ABC subunit UvrC | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.44 | LRK55_RS11530 | | ATP-dependent DNA helicase RecG | 0.49 | LRK55_RS00120 | | excinuclease ABC subunit UvrC | low | > 63 |
| Alteromonas macleodii MIT1002 | 0.43 | MIT1002_00111 | | ATP-dependent DNA helicase RecG | 0.43 | MIT1002_02153 | | Excinuclease ABC subunit C | low | > 70 |
| Shewanella oneidensis MR-1 | 0.43 | SO4364 | recG | ATP-dependent DNA helicase RecG (NCBI ptt file) | 0.44 | SO1861 | uvrC | excinuclease ABC, C subunit (NCBI ptt file) | 0.47 | 29 |
| Escherichia coli ECRC99 | 0.43 | KEDOAH_12600 | recG | ATP-dependent DNA helicase RecG | 0.45 | KEDOAH_02265 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECRC101 | 0.43 | OKFHMN_15545 | recG | ATP-dependent DNA helicase RecG | 0.45 | OKFHMN_25825 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECRC102 | 0.43 | NIAGMN_13305 | recG | ATP-dependent DNA helicase RecG | 0.45 | NIAGMN_02225 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECRC101 | 0.43 | MCAODC_06055 | recG | ATP-dependent DNA helicase RecG | 0.45 | MCAODC_19565 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECRC98 | 0.43 | JDDGAC_19170 | recG | ATP-dependent DNA helicase RecG | 0.45 | JDDGAC_00415 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Rhodanobacter sp. FW510-T8 | 0.43 | OKGIIK_12090 | recG | ATP-dependent DNA helicase RecG | 0.48 | OKGIIK_06930 | uvrC | excinuclease ABC subunit UvrC | low | > 52 |
| Rahnella sp. WP5 | 0.43 | EX31_RS15820 | | ATP-dependent DNA helicase RecG | 0.46 | EX31_RS24150 | | excinuclease ABC subunit UvrC | low | > 89 |
| Pantoea sp. MT58 | 0.43 | IAI47_00500 | | ATP-dependent DNA helicase RecG | 0.45 | IAI47_12465 | | excinuclease ABC subunit UvrC | low | > 76 |
| Escherichia coli ECOR38 | 0.43 | HEPCGN_14365 | recG | ATP-dependent DNA helicase RecG | 0.45 | HEPCGN_04180 | uvrC | excinuclease ABC subunit UvrC | low | > 85 |
| Escherichia fergusonii Becca | 0.43 | EFB2_00136 | | ATP-dependent DNA helicase RecG | 0.45 | EFB2_02033 | | UvrABC system protein C | 0.41 | 46 |
| Shewanella amazonensis SB2B | 0.43 | Sama_3375 | | ATP-dependent DNA helicase RecG (RefSeq) | 0.44 | Sama_1608 | uvrC | excinuclease ABC subunit C (RefSeq) | low | > 62 |
| Escherichia coli Nissle 1917 | 0.43 | ECOLIN_RS20800 | | ATP-dependent DNA helicase RecG | 0.45 | ECOLIN_RS10895 | | excinuclease ABC subunit UvrC | low | > 52 |
| Escherichia coli ECRC62 | 0.43 | BNILDI_04090 | recG | ATP-dependent DNA helicase RecG | 0.45 | BNILDI_15235 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Marinobacter adhaerens HP15 | 0.43 | HP15_309 | | DNA helicase, ATP-dependent, RecG | 0.46 | HP15_1568 | | excinuclease ABC subunit C | 0.80 | 6 |
| Kangiella aquimarina DSM 16071 | 0.43 | B158DRAFT_0566 | | ATP-dependent DNA helicase RecG (EC 3.6.1.-) | 0.45 | B158DRAFT_1273 | | Excinuclease ABC subunit C | 0.71 | 10 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.43 | OHPLBJKB_00049 | | ATP-dependent DNA helicase RecG | 0.45 | OHPLBJKB_01816 | | UvrABC system protein C | low | > 73 |
| Escherichia coli BW25113 | 0.42 | b3652 | recG | ATP-dependent DNA helicase (NCBI) | 0.45 | b1913 | uvrC | excinuclease ABC, subunit C; repair of UV damage to DNA (VIMSS) | low | > 76 |
| Escherichia coli BL21 | 0.42 | ECD_03509 | | ATP-dependent DNA helicase | 0.45 | ECD_01878 | | excinuclease UvrABC, endonuclease subunit | 0.66 | 24 |
| Escherichia coli ECOR27 | 0.42 | NOLOHH_07425 | recG | ATP-dependent DNA helicase RecG | 0.45 | NOLOHH_16445 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Dickeya dianthicola ME23 | 0.42 | DZA65_RS22160 | | ATP-dependent DNA helicase RecG | 0.44 | DZA65_RS14285 | | excinuclease ABC subunit UvrC | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.42 | GFF355 | | ATP-dependent DNA helicase RecG (EC 3.6.1.-) | 0.45 | GFF1700 | | Excinuclease ABC subunit C | low | > 78 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.42 | Xcc-8004.1204.1 | | ATP-dependent DNA helicase RecG (EC 3.6.1.-) | 0.45 | Xcc-8004.2477.1 | | Excinuclease ABC subunit C | low | > 74 |
| Erwinia tracheiphila SCR3 | 0.42 | LU632_RS22190 | recG | ATP-dependent DNA helicase RecG | 0.45 | LU632_RS10195 | uvrC | excinuclease ABC subunit UvrC | low | > 74 |
| Dickeya dadantii 3937 | 0.42 | DDA3937_RS00170 | | ATP-dependent DNA helicase RecG | 0.45 | DDA3937_RS13700 | | excinuclease ABC subunit UvrC | low | > 74 |
| Dickeya dianthicola 67-19 | 0.42 | HGI48_RS21190 | | ATP-dependent DNA helicase RecG | 0.44 | HGI48_RS13795 | | excinuclease ABC subunit UvrC | low | > 71 |
| Enterobacter sp. TBS_079 | 0.42 | MPMX20_00084 | | ATP-dependent DNA helicase RecG | 0.45 | MPMX20_02838 | | UvrABC system protein C | 0.35 | 42 |
| Serratia liquefaciens MT49 | 0.41 | IAI46_24905 | | ATP-dependent DNA helicase RecG | 0.46 | IAI46_09210 | | excinuclease ABC subunit UvrC | 0.81 | 6 |
| Enterobacter asburiae PDN3 | 0.41 | EX28DRAFT_3901 | | ATP-dependent DNA helicase RecG (EC 3.6.1.-) | 0.45 | EX28DRAFT_0634 | | Excinuclease ABC subunit C | low | > 76 |
| Klebsiella michiganensis M5al | 0.41 | BWI76_RS27440 | | DNA helicase RecG | 0.45 | BWI76_RS18330 | | excinuclease ABC subunit C | low | > 92 |
| Pectobacterium carotovorum WPP14 | 0.41 | HER17_RS21395 | | ATP-dependent DNA helicase RecG | 0.44 | HER17_RS07715 | | excinuclease ABC subunit UvrC | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.41 | CSW01_13680 | | DNA helicase RecG | 0.47 | CSW01_06140 | | excinuclease ABC subunit C | low | > 62 |
| Agrobacterium fabrum C58 | 0.34 | Atu1780 | | ATP-dependent DNA helicase | 0.37 | Atu1129 | | excinuclease ABC chain C | 0.51 | 20 |
| Rhizobium sp. OAE497 | 0.34 | ABIE40_RS09300 | | ATP-dependent DNA helicase RecG | 0.36 | ABIE40_RS06500 | | excinuclease ABC subunit UvrC | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.34 | CCNA_01504 | | ATP-dependent DNA helicase recG | 0.35 | CCNA_02975 | | excinuclease ABC subunit C | low | > 67 |
| Caulobacter crescentus NA1000 | 0.34 | CCNA_01504 | | ATP-dependent DNA helicase recG | 0.35 | CCNA_02975 | | excinuclease ABC subunit C | low | > 66 |
| Sinorhizobium meliloti 1021 | 0.33 | SMc00228 | | ATP-dependent DNA helicase RecG | 0.38 | SMc00602 | | excinuclease ABC subunit C | 0.66 | 11 |
| Phocaeicola vulgatus CL09T03C04 | 0.33 | HMPREF1058_RS08295 | | ATP-dependent DNA helicase RecG | 0.25 | HMPREF1058_RS11525 | | excinuclease ABC subunit UvrC | low | > 67 |
| Magnetospirillum magneticum AMB-1 | 0.33 | AMB_RS12400 | | ATP-dependent DNA helicase RecG | 0.37 | AMB_RS19240 | | UvrABC system protein C | — | — |
| Phocaeicola dorei CL03T12C01 | 0.33 | ABI39_RS02470 | | ATP-dependent DNA helicase RecG | 0.25 | ABI39_RS05415 | | excinuclease ABC subunit UvrC | low | > 72 |
| Azospirillum sp. SherDot2 | 0.33 | MPMX19_00951 | | ATP-dependent DNA helicase RecG | 0.37 | MPMX19_01070 | | UvrABC system protein C | — | — |
| Synechococcus elongatus PCC 7942 | 0.33 | Synpcc7942_1079 | recG | ATP-dependent DNA helicase RecG | 0.26 | Synpcc7942_1945 | uvrC | excinuclease ABC subunit C | — | — |
| Azospirillum brasilense Sp245 | 0.33 | AZOBR_RS09850 | | ATP-dependent DNA helicase RecG | 0.38 | AZOBR_RS08965 | | excinuclease ABC subunit C | low | > 97 |
| Parabacteroides merdae CL09T00C40 | 0.33 | HMPREF1078_RS12765 | | ATP-dependent DNA helicase RecG | 0.25 | HMPREF1078_RS06310 | | excinuclease ABC subunit UvrC | — | — |
| Dinoroseobacter shibae DFL-12 | 0.32 | Dshi_1510 | | DEAD/DEAH box helicase domain protein (RefSeq) | 0.38 | Dshi_0644 | | excinuclease ABC, C subunit (RefSeq) | 0.67 | 5 |
| Bacteroides stercoris CC31F | 0.32 | HMPREF1181_RS06615 | | ATP-dependent DNA helicase RecG | 0.24 | HMPREF1181_RS02095 | | excinuclease ABC subunit UvrC | low | > 56 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.32 | BT3924 | | ATP-dependent DNA helicase recG (NCBI ptt file) | 0.24 | BT3266 | | excinuclease ABC subunit C (NCBI ptt file) | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.32 | Echvi_1162 | | ATP-dependent DNA helicase RecG | 0.27 | Echvi_0619 | | excinuclease ABC, C subunit | 0.85 | 3 |
| Phaeobacter inhibens DSM 17395 | 0.32 | PGA1_c14380 | | ATP-dependent DNA helicase RecG | 0.37 | PGA1_c02880 | | uvrABC system protein C | 0.65 | 2 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.32 | CA264_15020 | | DNA helicase RecG | 0.24 | CA264_16350 | | excinuclease ABC subunit C | 0.59 | 5 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.31 | A4249_RS04765 | | ATP-dependent DNA helicase RecG | 0.37 | A4249_RS01670 | | excinuclease ABC subunit UvrC | low | > 48 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.31 | ABZR88_RS17240 | | ATP-dependent DNA helicase RecG | 0.24 | ABZR88_RS04150 | | excinuclease ABC subunit UvrC | low | > 71 |
| Rhodopseudomonas palustris CGA009 | 0.30 | TX73_013795 | | ATP-dependent DNA helicase RecG | 0.37 | TX73_006010 | | excinuclease ABC subunit UvrC | low | > 86 |
| Fusobacterium nucleatum SB010 | 0.30 | HUW76_01465 | | ATP-dependent DNA helicase RecG | 0.27 | HUW76_06695 | | excinuclease ABC subunit UvrC | low | > 35 |
| Rhodospirillum rubrum S1H | 0.30 | Rru_A1728 | | ATP-dependent DNA helicase RecG (NCBI) | 0.37 | Rru_A2220 | | Excinuclease ABC, C subunit (NCBI) | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.30 | CA265_RS22835 | | ATP-dependent DNA helicase RecG | 0.25 | CA265_RS18110 | | excinuclease ABC subunit C | 0.81 | 4 |
| Mycobacterium tuberculosis H37Rv | 0.25 | Rv2973c | | Probable ATP-dependent DNA helicase RecG | 0.28 | Rv1420 | | Probable excinuclease ABC (subunit C-nuclease) UvrC | low | > 58 |
Not shown: 4 genomes with orthologs for Dsui_0311 only; 5 genomes with orthologs for Dsui_2470 only