Conservation of cofitness between Dsui_0707 and Dsui_0044 in Dechlorosoma suillum PS

87 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dechlorosoma suillum PS 1.0 Dsui_0707 protein RecA 1.0 Dsui_0044 exodeoxyribonuclease III 0.57 20
Rhodanobacter sp. FW510-T8 0.81 OKGIIK_03740 recA recombinase RecA 0.58 OKGIIK_15390 xth exodeoxyribonuclease III low > 52
Rhodanobacter denitrificans MT42 0.81 LRK55_RS14695 recombinase RecA 0.55 LRK55_RS08390 exodeoxyribonuclease III low > 63
Rhodanobacter denitrificans FW104-10B01 0.81 LRK54_RS14980 recombinase RecA 0.55 LRK54_RS08625 exodeoxyribonuclease III 0.57 10
Paraburkholderia sabiae LMG 24235 0.81 QEN71_RS02335 recombinase RecA 0.63 QEN71_RS05680 exodeoxyribonuclease III — —
Paraburkholderia graminis OAS925 0.79 ABIE53_003448 recombination protein RecA 0.61 ABIE53_002802 exodeoxyribonuclease-3 low > 113
Paraburkholderia bryophila 376MFSha3.1 0.79 H281DRAFT_04208 RecA protein 0.62 H281DRAFT_00456 Exodeoxyribonuclease III low > 103
Burkholderia phytofirmans PsJN 0.79 BPHYT_RS16360 recombinase RecA 0.62 BPHYT_RS12925 exodeoxyribonuclease III — —
Kangiella aquimarina DSM 16071 0.78 B158DRAFT_1531 protein RecA 0.29 B158DRAFT_1291 exodeoxyribonuclease III 0.56 25
Cupriavidus basilensis FW507-4G11 0.78 RR42_RS03080 recombinase RecA 0.60 RR42_RS07325 exodeoxyribonuclease III 0.51 7
Dyella japonica UNC79MFTsu3.2 0.78 ABZR86_RS00660 recombinase RecA 0.58 ABZR86_RS14930 exodeoxyribonuclease III 0.44 68
Castellaniella sp019104865 MT123 0.77 ABCV34_RS04460 recombinase RecA 0.62 ABCV34_RS03115 exodeoxyribonuclease III low > 48
Alteromonas macleodii MIT1002 0.77 MIT1002_00955 Recombinase A 0.29 MIT1002_01652 Exodeoxyribonuclease III low > 70
Ralstonia sp. UNC404CL21Col 0.75 ABZR87_RS07965 recombinase RecA 0.59 ABZR87_RS13495 exodeoxyribonuclease III 0.52 50
Ralstonia solanacearum UW163 0.75 UW163_RS01625 recombinase RecA 0.56 UW163_RS15010 exodeoxyribonuclease III — —
Ralstonia solanacearum IBSBF1503 0.75 RALBFv3_RS12010 recombinase RecA 0.56 RALBFv3_RS01700 exodeoxyribonuclease III low > 76
Pseudomonas putida KT2440 0.75 PP_1629 Protein RecA 0.37 PP_2707 putative Exodeoxyribonuclease III low > 96
Ralstonia solanacearum GMI1000 0.75 RS_RS02760 DNA recombination/repair protein RecA 0.57 RS_RS08025 exodeoxyribonuclease III — —
Ralstonia solanacearum PSI07 0.75 RPSI07_RS21260 recombinase RecA 0.57 RPSI07_RS15785 exodeoxyribonuclease III low > 81
Variovorax sp. SCN45 0.75 GFF5390 RecA protein 0.53 GFF3064 Exodeoxyribonuclease III (EC 3.1.11.2) low > 127
Variovorax sp. OAS795 0.75 ABID97_RS02275 recombinase RecA 0.53 ABID97_RS09955 exodeoxyribonuclease III 0.50 26
Pseudomonas stutzeri RCH2 0.75 Psest_2872 protein RecA 0.37 Psest_1187 exodeoxyribonuclease III low > 67
Acidovorax sp. GW101-3H11 0.75 Ac3H11_1255 RecA protein 0.55 Ac3H11_4433 Exodeoxyribonuclease III (EC 3.1.11.2) — —
Pseudomonas fluorescens SBW25 0.74 PFLU_RS05885 recombinase RecA 0.29 PFLU_RS18930 exodeoxyribonuclease III low > 109
Pseudomonas fluorescens SBW25-INTG 0.74 PFLU_RS05885 recombinase RecA 0.29 PFLU_RS18930 exodeoxyribonuclease III low > 109
Pseudomonas simiae WCS417 0.74 PS417_05815 recombinase RecA 0.29 PS417_16980 exonuclease III low > 88
Xanthomonas campestris pv. campestris strain 8004 0.74 Xcc-8004.3111.1 RecA protein 0.60 Xcc-8004.5140.1 Exodeoxyribonuclease III (EC 3.1.11.2) — —
Lysobacter sp. OAE881 0.74 ABIE51_RS07800 recombinase RecA 0.60 ABIE51_RS01755 exodeoxyribonuclease III low > 62
Marinobacter adhaerens HP15 0.74 HP15_1048 recombinase A 0.29 HP15_1776 exonuclease III low > 73
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_1378 RecA protein 0.29 Psyr_2476 Exodeoxyribonuclease III low > 86
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_1378 RecA protein 0.29 Psyr_2476 Exodeoxyribonuclease III low > 86
Herbaspirillum seropedicae SmR1 0.74 HSERO_RS03270 protein RecA 0.66 HSERO_RS15630 exodeoxyribonuclease III 0.60 6
Shewanella oneidensis MR-1 0.74 SO3430 recA recA protein (NCBI ptt file) 0.29 SO3037 xth exodeoxyribonuclease III (NCBI ptt file) low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.73 GFF2500 RecA protein 0.53 GFF5268 Exodeoxyribonuclease III (EC 3.1.11.2) 0.81 5
Pseudomonas sp. S08-1 0.73 OH686_18205 protein RecA 0.36 OH686_23775 exodeoxyribonuclease III low > 80
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_3143 RecA protein 0.37 Pf1N1B4_38 Exodeoxyribonuclease III (EC 3.1.11.2) low > 87
Erwinia tracheiphila SCR3 0.73 LU632_RS15735 recA recombinase RecA 0.32 LU632_RS12950 xthA exodeoxyribonuclease III 0.42 38
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_16805 recombinase RecA 0.29 AO353_27875 exonuclease III low > 101
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_4668 RecA protein 0.37 PfGW456L13_3967 Exodeoxyribonuclease III (EC 3.1.11.2) low > 87
Shewanella sp. ANA-3 0.73 Shewana3_1126 recA recombinase A (RefSeq) 0.29 Shewana3_1503 exonuclease III (RefSeq) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF4693 RecA protein 0.33 GFF3490 Exodeoxyribonuclease III (EC 3.1.11.2) — —
Pectobacterium carotovorum WPP14 0.73 HER17_RS05045 recombinase RecA 0.30 HER17_RS11085 exodeoxyribonuclease III 0.64 23
Escherichia coli ECOR27 0.73 NOLOHH_12545 recA recombinase RecA 0.33 NOLOHH_17415 xthA exodeoxyribonuclease III — —
Escherichia coli ECRC102 0.73 NIAGMN_18475 recA recombinase RecA 0.33 NIAGMN_01165 xthA exodeoxyribonuclease III — —
Dickeya dadantii 3937 0.73 DDA3937_RS16245 recombinase RecA 0.31 DDA3937_RS10310 exodeoxyribonuclease III low > 74
Escherichia coli ECRC101 0.73 OKFHMN_20705 recA recombinase RecA 0.33 OKFHMN_26900 xthA exodeoxyribonuclease III — —
Escherichia coli ECRC62 0.73 BNILDI_11105 recA recombinase RecA 0.33 BNILDI_16200 xthA exodeoxyribonuclease III — —
Klebsiella michiganensis M5al 0.73 BWI76_RS22180 recombinase RecA 0.33 BWI76_RS11665 exodeoxyribonuclease III — —
Escherichia coli ECOR38 0.73 HEPCGN_19900 recA recombinase RecA 0.33 HEPCGN_05265 xthA exodeoxyribonuclease III low > 85
Escherichia coli ECRC101 0.73 MCAODC_11230 recA recombinase RecA 0.33 MCAODC_18510 xthA exodeoxyribonuclease III — —
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_2993 RecA protein 0.38 Pf6N2E2_2237 Exodeoxyribonuclease III (EC 3.1.11.2) — —
Pseudomonas sp. RS175 0.73 PFR28_00472 Protein RecA 0.38 PFR28_01207 Exodeoxyribonuclease III low > 88
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_05670 recombinase RecA 0.38 AO356_01850 exodeoxyribonuclease III low > 104
Escherichia fergusonii Becca 0.73 EFB2_01225 Protein RecA 0.33 EFB2_02244 Exodeoxyribonuclease III low > 86
Escherichia coli ECRC99 0.73 KEDOAH_07430 recA recombinase RecA 0.33 KEDOAH_01210 xthA exodeoxyribonuclease III — —
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_02875 DNA recombination/repair protein RecA 0.35 CSW01_09315 exodeoxyribonuclease III 0.47 37
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_01035 Protein RecA 0.33 OHPLBJKB_01983 Exodeoxyribonuclease III low > 73
Escherichia coli ECRC98 0.73 JDDGAC_24370 recA recombinase RecA 0.33 JDDGAC_01475 xthA exodeoxyribonuclease III — —
Escherichia coli Nissle 1917 0.73 ECOLIN_RS15060 recombinase RecA 0.33 ECOLIN_RS09750 exodeoxyribonuclease III — —
Escherichia coli BW25113 0.73 b2699 recA recombinase A (NCBI) 0.33 b1749 xthA exonuclease III (NCBI) low > 76
Escherichia coli BL21 0.73 ECD_02549 DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor 0.33 ECD_01718 exonuclease III — —
Dickeya dianthicola 67-19 0.72 HGI48_RS16355 recombinase RecA 0.32 HGI48_RS10320 exodeoxyribonuclease III low > 71
Rahnella sp. WP5 0.72 EX31_RS07800 recombinase RecA 0.33 EX31_RS06330 exodeoxyribonuclease III low > 89
Dickeya dianthicola ME23 0.72 DZA65_RS17450 recombinase RecA 0.31 DZA65_RS10795 exodeoxyribonuclease III — —
Pantoea sp. MT58 0.72 IAI47_04300 recombinase RecA 0.32 IAI47_08990 exodeoxyribonuclease III low > 76
Enterobacter asburiae PDN3 0.72 EX28DRAFT_2785 protein RecA 0.33 EX28DRAFT_1753 exodeoxyribonuclease III — —
Enterobacter sp. TBS_079 0.72 MPMX20_03580 Protein RecA 0.34 MPMX20_01864 Exodeoxyribonuclease III low > 85
Rhodopseudomonas palustris CGA009 0.72 TX73_019940 recombinase RecA 0.44 TX73_014820 exodeoxyribonuclease III — —
Magnetospirillum magneticum AMB-1 0.72 AMB_RS03205 DNA recombination/repair protein RecA 0.43 AMB_RS12755 exodeoxyribonuclease III low > 64
Azospirillum brasilense Sp245 0.72 AZOBR_RS11095 recombinase RecA 0.41 AZOBR_RS15540 exodeoxyribonuclease III 0.66 2
Serratia liquefaciens MT49 0.72 IAI46_03840 recombinase RecA 0.32 IAI46_14290 exodeoxyribonuclease III low > 86
Brevundimonas sp. GW460-12-10-14-LB2 0.71 A4249_RS12615 recombinase RecA 0.39 A4249_RS02655 exodeoxyribonuclease III low > 48
Shewanella amazonensis SB2B 0.71 Sama_1046 recA recombinase A (RefSeq) 0.29 Sama_2139 exodeoxyribonuclease III (RefSeq) low > 62
Rhizobium sp. OAE497 0.71 ABIE40_RS10320 recombinase RecA 0.42 ABIE40_RS08420 exodeoxyribonuclease III low > 107
Azospirillum sp. SherDot2 0.71 MPMX19_00869 Protein RecA 0.40 MPMX19_04331 Exodeoxyribonuclease — —
Shewanella loihica PV-4 0.71 Shew_1215 recA recombinase A (RefSeq) 0.32 Shew_2262 exonuclease III (RefSeq) — —
Agrobacterium fabrum C58 0.71 Atu1874 RecA protein 0.39 Atu1714 exonuclease III low > 89
Phaeobacter inhibens DSM 17395 0.71 PGA1_c15260 protein recA (recombinase A) 0.39 PGA1_c11070 exodeoxyribonuclease III 0.21 52
Rhodospirillum rubrum S1H 0.70 Rru_A2819 RecA DNA recombination protein (NCBI) 0.41 Rru_A1784 exodeoxyribonuclease III xth (NCBI) — —
Sinorhizobium meliloti 1021 0.70 SMc00760 recombinase A 0.40 SMc02077 exodeoxyribonuclease III protein 0.53 7
Sphingomonas koreensis DSMZ 15582 0.69 Ga0059261_0204 protein RecA 0.35 Ga0059261_3499 exodeoxyribonuclease III low > 68
Caulobacter crescentus NA1000 0.68 CCNA_01141 RecA protein 0.41 CCNA_02090 exodeoxyribonuclease III low > 66
Caulobacter crescentus NA1000 Δfur 0.68 CCNA_01141 RecA protein 0.41 CCNA_02090 exodeoxyribonuclease III — —
Bosea sp. OAE506 0.68 ABIE41_RS13335 recombinase RecA 0.39 ABIE41_RS15705 exodeoxyribonuclease III 0.69 6
Dinoroseobacter shibae DFL-12 0.65 Dshi_1643 recA protein (RefSeq) 0.40 Dshi_1886 exodeoxyribonuclease III Xth (RefSeq) low > 64
Mucilaginibacter yixingensis YX-36 DSM 26809 0.64 ABZR88_RS16740 recombinase RecA 0.37 ABZR88_RS19760 exodeoxyribonuclease III low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.63 CA265_RS00600 recombinase RecA 0.36 CA265_RS16670 exodeoxyribonuclease III low > 88
Synechococcus elongatus PCC 7942 0.58 Synpcc7942_0348 recA recombinase A 0.48 Synpcc7942_2607 xthA Exodeoxyribonuclease III — —

Not shown: 13 genomes with orthologs for Dsui_0707 only; 1 genomes with orthologs for Dsui_0044 only