Conservation of cofitness between CSW01_01045 and CSW01_12725 in Vibrio cholerae E7946 ATCC 55056

101 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01045 DNA helicase RecQ 1.0 CSW01_12725 aspartate carbamoyltransferase 0.80 1
Klebsiella pneumoniae MKP103 0.67 KDGMDA_09735 ATP-dependent DNA helicase RecQ 0.76 KDGMDA_11465 aspartate carbamoyltransferase low > 95
Escherichia coli ECRC62 0.67 BNILDI_05040 recQ ATP-dependent DNA helicase RecQ 0.75 BNILDI_07385 pyrB aspartate carbamoyltransferase low > 75
Escherichia coli ECOR27 0.67 NOLOHH_06490 recQ ATP-dependent DNA helicase RecQ 0.76 NOLOHH_04125 pyrB aspartate carbamoyltransferase low > 76
Escherichia coli ECRC102 0.67 NIAGMN_12115 recQ ATP-dependent DNA helicase RecQ 0.75 NIAGMN_09715 pyrB aspartate carbamoyltransferase low > 80
Escherichia coli ECRC101 0.67 MCAODC_04865 recQ ATP-dependent DNA helicase RecQ 0.75 MCAODC_02370 pyrB aspartate carbamoyltransferase low > 87
Escherichia coli ECOR38 0.67 HEPCGN_13060 recQ ATP-dependent DNA helicase RecQ 0.75 HEPCGN_10060 pyrB aspartate carbamoyltransferase low > 88
Escherichia coli ECRC98 0.67 JDDGAC_17985 recQ ATP-dependent DNA helicase RecQ 0.75 JDDGAC_15505 pyrB aspartate carbamoyltransferase low > 87
Escherichia coli ECRC100 0.67 OKFHMN_14360 recQ ATP-dependent DNA helicase RecQ 0.75 OKFHMN_11865 pyrB aspartate carbamoyltransferase low > 79
Escherichia coli ECRC99 0.67 KEDOAH_13790 recQ ATP-dependent DNA helicase RecQ 0.75 KEDOAH_16290 pyrB aspartate carbamoyltransferase — —
Pantoea sp. MT58 0.67 IAI47_18360 ATP-dependent DNA helicase RecQ 0.74 IAI47_16860 aspartate carbamoyltransferase low > 76
Escherichia fergusonii Becca 0.67 EFB2_04815 ATP-dependent DNA helicase RecQ 0.75 EFB2_04288 Aspartate carbamoyltransferase catalytic subunit low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_04229 ATP-dependent DNA helicase RecQ 0.75 OHPLBJKB_03789 Aspartate carbamoyltransferase catalytic subunit low > 74
Escherichia coli Nissle 1917 0.67 ECOLIN_RS21935 ATP-dependent DNA helicase RecQ 0.75 ECOLIN_RS24625 aspartate carbamoyltransferase low > 55
Escherichia coli BW25113 0.67 b3822 recQ ATP-dependent DNA helicase (NCBI) 0.75 b4245 pyrB aspartate carbamoyltransferase catalytic subunit (NCBI) low > 76
Escherichia coli BL21 0.66 ECD_03701 ATP-dependent DNA helicase 0.75 ECD_04113 aspartate carbamoyltransferase, catalytic subunit low > 61
Klebsiella michiganensis M5al 0.66 BWI76_RS01245 DNA helicase RecQ 0.76 BWI76_RS02995 aspartate carbamoyltransferase low > 92
Serratia liquefaciens MT49 0.66 IAI46_00770 ATP-dependent DNA helicase RecQ 0.76 IAI46_02275 aspartate carbamoyltransferase low > 87
Dickeya dianthicola 67-19 0.66 HGI48_RS20005 ATP-dependent DNA helicase RecQ 0.75 HGI48_RS01900 aspartate carbamoyltransferase low > 71
Erwinia tracheiphila SCR3 0.66 LU632_RS24095 recQ ATP-dependent DNA helicase RecQ 0.74 LU632_RS20950 pyrB aspartate carbamoyltransferase low > 73
Pantoea agglomerans CFBP13505 P0401 0.66 PagCFBP13505_RS15340 ATP-dependent DNA helicase RecQ 0.75 PagCFBP13505_RS08955 aspartate carbamoyltransferase low > 74
Erwinia amylovora T8 0.66 OLJFJH_06445 ATP-dependent DNA helicase RecQ 0.75 OLJFJH_07330 aspartate carbamoyltransferase low > 58
Dickeya dianthicola ME23 0.66 DZA65_RS21045 ATP-dependent DNA helicase RecQ 0.75 DZA65_RS01970 aspartate carbamoyltransferase low > 75
Dickeya dadantii 3937 0.66 DDA3937_RS19850 ATP-dependent DNA helicase RecQ 0.75 DDA3937_RS01925 aspartate carbamoyltransferase low > 74
Erwinia tracheiphila HP pepo 2.2 0.66 IJEDHG_08740 recQ ATP-dependent DNA helicase RecQ 0.74 IJEDHG_14060 pyrB aspartate carbamoyltransferase low > 61
Enterobacter asburiae PDN3 0.66 EX28DRAFT_4487 ATP-dependent DNA helicase RecQ 0.74 EX28DRAFT_3446 aspartate carbamoyltransferase (EC 2.1.3.2) — —
Enterobacter sp. TBS_079 0.66 MPMX20_04458 ATP-dependent DNA helicase RecQ 0.74 MPMX20_00544 Aspartate carbamoyltransferase catalytic subunit low > 85
Rahnella sp. WP5 0.65 EX31_RS15210 ATP-dependent DNA helicase RecQ 0.74 EX31_RS12785 aspartate carbamoyltransferase low > 89
Pectobacterium carotovorum WPP14 0.65 HER17_RS01395 ATP-dependent DNA helicase RecQ 0.73 HER17_RS19510 aspartate carbamoyltransferase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF248 ATP-dependent DNA helicase RecQ 0.75 GFF930 Aspartate carbamoyltransferase (EC 2.1.3.2) low > 78
Shewanella sp. ANA-3 0.59 Shewana3_3763 ATP-dependent DNA helicase RecQ (RefSeq) 0.34 Shewana3_3070 aspartate carbamoyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.58 SO4241 recQ ATP-dependent DNA helicase RecQ (NCBI ptt file) 0.34 SO1301 pyrB aspartate carbamoyltransferase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.58 Shew_3474 ATP-dependent DNA helicase RecQ (RefSeq) 0.33 Shew_1013 aspartate carbamoyltransferase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.57 Sama_0333 ATP-dependent DNA helicase RecQ (RefSeq) 0.33 Sama_0840 aspartate carbamoyltransferase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.54 MIT1002_00148 ATP-dependent DNA helicase RecQ 0.33 MIT1002_00423 Aspartate carbamoyltransferase catalytic chain low > 70
Xanthobacter sp. DMC5 0.47 GFF753 ATP-dependent DNA helicase RecQ 0.19 GFF929 Aspartate carbamoyltransferase — —
Pseudomonas sp. SVBP6 0.46 COO64_RS21845 recQ DNA helicase RecQ 0.24 COO64_RS13575 aspartate carbamoyltransferase catalytic subunit low > 93
Pseudomonas aeruginosa MRSN321 0.45 DY961_RS00140 recQ;go_function=DNA DNA helicase RecQ 0.23 DY961_RS21990 aspartate carbamoyltransferase catalytic subunit 0.58 53
Pseudomonas aeruginosa PUPa3 0.45 DQ20_RS40870 recQ;go_function=DNA DNA helicase RecQ 0.23 DQ20_RS37310 aspartate carbamoyltransferase catalytic subunit low > 101
Pseudomonas aeruginosa PA14 0.45 IKLFDK_17145 DNA helicase RecQ 0.23 IKLFDK_23410 aspartate carbamoyltransferase catalytic subunit low > 98
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_4423 ATP-dependent DNA helicase RecQ 0.25 PfGW456L13_1016 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Pseudomonas sp. RS175 0.45 PFR28_00788 ATP-dependent DNA helicase RecQ 0.25 PFR28_04237 Aspartate carbamoyltransferase — —
Marinobacter adhaerens HP15 0.45 HP15_1718 ATP-dependent DNA helicase RecQ 0.24 HP15_3507 aspartate carbamoyltransferase low > 73
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_04050 ATP-dependent DNA helicase RecQ 0.25 AO356_13450 aspartate carbamoyltransferase catalytic subunit — —
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS19925 DNA helicase RecQ 0.24 ABZR86_RS10390 aspartate carbamoyltransferase catalytic subunit — —
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS13000 DNA helicase RecQ 0.23 LRK54_RS04220 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas sp. S08-1 0.45 OH686_20670 ATP-dependent DNA helicase RecQ 0.23 OH686_10940 aspartate carbamoyltransferase — —
Pseudomonas segetis P6 0.45 MPMX49_02936 ATP-dependent DNA helicase RecQ 0.23 MPMX49_00620 Aspartate carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_2645 ATP-dependent DNA helicase RecQ 0.25 Pf6N2E2_4606 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Rhodanobacter denitrificans MT42 0.45 LRK55_RS12700 DNA helicase RecQ 0.23 LRK55_RS03990 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_3533 ATP-dependent DNA helicase RecQ 0.25 Pf1N1B4_2347 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.45 CA264_07560 DNA helicase RecQ 0.22 CA264_20465 aspartate carbamoyltransferase low > 74
Pseudomonas sp. DMC3 0.44 GFF2380 ATP-dependent DNA helicase RecQ 0.25 GFF204 Aspartate carbamoyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ 0.23 Psyr_0482 aspartate carbamoyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ 0.23 Psyr_0482 aspartate carbamoyltransferase — —
Pseudomonas sp. BP01 0.44 JOY50_RS01155 recQ DNA helicase RecQ 0.24 JOY50_RS09700 aspartate carbamoyltransferase catalytic subunit low > 84
Pseudomonas putida KT2440 0.44 PP_4516 ATP-dependent DNA 3 0.24 PP_4998 Aspartate carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_18430 ATP-dependent DNA helicase RecQ 0.25 AO353_08135 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas simiae WCS417 0.44 PS417_19950 ATP-dependent DNA helicase RecQ 0.24 PS417_26700 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas lactucae CFBP13502 0.44 GEMAOFIL_04187 ATP-dependent DNA helicase RecQ 0.24 GEMAOFIL_05477 Aspartate carbamoyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS21920 DNA helicase RecQ 0.24 PFLU_RS28345 aspartate carbamoyltransferase — —
Rhodanobacter sp000427505 FW510-R12 0.44 LRK53_RS15600 DNA helicase RecQ 0.23 LRK53_RS05705 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas fluorescens SBW25 0.44 PFLU_RS21920 DNA helicase RecQ 0.24 PFLU_RS28345 aspartate carbamoyltransferase — —
Pseudomonas orientalis W4I3 0.44 QF045_RS22070 DNA helicase RecQ 0.24 QF045_RS01100 aspartate carbamoyltransferase catalytic subunit low > 93
Pseudomonas stutzeri RCH2 0.44 Psest_1869 ATP-dependent DNA helicase RecQ 0.24 Psest_0291 aspartate carbamoyltransferase — —
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS02465 ATP-dependent DNA helicase RecQ 0.22 HSERO_RS02330 aspartate carbamoyltransferase low > 78
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_02375 recQ DNA helicase RecQ 0.22 OKGIIK_11095 pyrB aspartate carbamoyltransferase catalytic subunit — —
Agrobacterium fabrum C58 0.44 Atu0061 ATP-dependent DNA helicase 0.20 Atu1308 aspartate carbamoyl transferase catalytic subunit low > 89
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.1476.1 ATP-dependent DNA helicase RecQ 0.25 Xcc-8004.1722.1 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Methylophilus sp. DMC18 0.43 GFF2139 ATP-dependent DNA helicase RecQ 0.23 GFF868 Aspartate carbamoyltransferase — —
Magnetospirillum magneticum AMB-1 0.43 AMB_RS21505 DNA helicase RecQ 0.23 AMB_RS18300 aspartate carbamoyltransferase — —
Dinoroseobacter shibae DFL-12 0.43 Dshi_3334 ATP-dependent DNA helicase RecQ (RefSeq) 0.23 Dshi_3091 aspartate carbamoyltransferase (RefSeq) low > 64
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS02880 DNA helicase RecQ 0.22 ABZR87_RS08625 aspartate carbamoyltransferase catalytic subunit low > 80
Mucilaginibacter yixingensis YX-36 DSM 26809 0.42 ABZR88_RS20865 DNA helicase RecQ 0.23 ABZR88_RS03460 aspartate carbamoyltransferase catalytic subunit — —
Phaeobacter inhibens DSM 17395 0.42 PGA1_c31900 ATP-dependent DNA helicase RecQ 0.22 PGA1_c03060 aspartate carbamoyltransferase PyrB low > 62
Echinicola vietnamensis KMM 6221, DSM 17526 0.42 Echvi_0784 ATP-dependent DNA helicase RecQ 0.23 Echvi_4661 aspartate carbamoyltransferase — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS19310 ATP-dependent DNA helicase RecQ 0.23 RR42_RS15860 aspartate carbamoyltransferase catalytic subunit — —
Ralstonia solanacearum GMI1000 0.42 RS_RS15155 DNA helicase RecQ 0.22 RS_RS03410 aspartate carbamoyltransferase — —
Dechlorosoma suillum PS 0.42 Dsui_3092 ATP-dependent DNA helicase RecQ 0.23 Dsui_0596 aspartate carbamoyltransferase — —
Ralstonia solanacearum UW163 0.42 UW163_RS06400 DNA helicase RecQ 0.22 UW163_RS00940 aspartate carbamoyltransferase catalytic subunit — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS07220 DNA helicase RecQ 0.22 RALBFv3_RS12625 aspartate carbamoyltransferase catalytic subunit — —
Ralstonia solanacearum PSI07 0.42 RPSI07_RS10025 DNA helicase RecQ 0.22 RPSI07_RS20635 aspartate carbamoyltransferase catalytic subunit — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF1958 ATP-dependent DNA helicase RecQ 0.21 GFF651 Aspartate carbamoyltransferase (EC 2.1.3.2) low > 90
Azospirillum brasilense Sp245 0.42 AZOBR_RS02840 ATP-dependent DNA helicase RecQ 0.22 AZOBR_RS20575 aspartate carbamoyltransferase low > 97
Lysobacter sp. OAE881 0.42 ABIE51_RS05145 DNA helicase RecQ 0.24 ABIE51_RS16015 aspartate carbamoyltransferase catalytic subunit low > 62
Sinorhizobium meliloti 1021 0.42 SMc01566 ATP-dependent DNA helicase 0.21 SMc01360 aspartate carbamoyltransferase catalytic subunit low > 103
Acidovorax sp. GW101-3H11 0.41 Ac3H11_3308 ATP-dependent DNA helicase RecQ 0.21 Ac3H11_3978 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Rhodopseudomonas palustris CGA009 0.41 TX73_025080 DNA helicase RecQ 0.19 TX73_016120 aspartate carbamoyltransferase catalytic subunit — —
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS14585 DNA helicase RecQ 0.50 HMPREF1058_RS03820 aspartate carbamoyltransferase — —
Bosea sp. OAE506 0.41 ABIE41_RS04160 DNA helicase RecQ 0.20 ABIE41_RS17230 aspartate carbamoyltransferase catalytic subunit low > 77
Azospirillum sp. SherDot2 0.41 MPMX19_00123 ATP-dependent DNA helicase RecQ 0.22 MPMX19_01054 Aspartate carbamoyltransferase low > 112
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS10235 DNA helicase RecQ 0.50 ABI39_RS17400 aspartate carbamoyltransferase — —
Rhodospirillum rubrum S1H 0.40 Rru_A0089 ATP-dependent DNA helicase RecQ (NCBI) 0.22 Rru_A3190 Aspartate carbamoyltransferase (NCBI) low > 58
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS01195 DNA helicase RecQ 0.51 HMPREF1078_RS01350 aspartate carbamoyltransferase — —
Bacteroides stercoris CC31F 0.40 HMPREF1181_RS14110 DNA helicase RecQ 0.51 HMPREF1181_RS14990 aspartate carbamoyltransferase low > 56
Cellulophaga baltica 18 0.39 M666_RS16920 DNA helicase RecQ 0.24 M666_RS11460 aspartate carbamoyltransferase catalytic subunit low > 67
Bacteroides thetaiotaomicron VPI-5482 0.39 BT1848 ATP-dependent DNA helicase recQ (NCBI ptt file) 0.50 BT0742 aspartate carbamoyltransferase catalytic chain (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.38 BACOVA_04594 ATP-dependent DNA helicase RecQ 0.50 BACOVA_02450 aspartate carbamoyltransferase — —
Sphingobium sp. HT1-2 0.38 GFF798 ATP-dependent DNA helicase RecQ 0.21 GFF1872 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS08905 DNA helicase RecQ 0.24 CA265_RS14660 aspartate carbamoyltransferase — —
Fusobacterium nucleatum SB010 0.35 HUW76_07235 DNA helicase RecQ 0.23 HUW76_08765 aspartate carbamoyltransferase catalytic subunit low > 35
Bifidobacterium breve UCC2003 0.32 BBR_RS13150 DNA helicase RecQ 0.42 BBR_RS15425 aspartate carbamoyltransferase low > 34

Not shown: 12 genomes with orthologs for CSW01_01045 only; 10 genomes with orthologs for CSW01_12725 only