Conservation of cofitness between CSW01_05755 and CSW01_01285 in Vibrio cholerae E7946 ATCC 55056

97 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05755 histidinol-phosphate transaminase 1.0 CSW01_01285 perosamine synthetase 0.72 16
Dickeya dianthicola 67-19 0.60 HGI48_RS09740 histidinol-phosphate transaminase 0.26 HGI48_RS21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 71
Dickeya dadantii 3937 0.60 DDA3937_RS09730 histidinol-phosphate transaminase 0.26 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 74
Dickeya dianthicola ME23 0.60 DZA65_RS10050 histidinol-phosphate transaminase 0.25 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Pectobacterium carotovorum WPP14 0.60 HER17_RS12235 histidinol-phosphate transaminase 0.24 HER17_RS06520 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Escherichia coli ECRC62 0.60 BNILDI_14735 hisC histidinol-phosphate transaminase 0.22 BNILDI_13535 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Escherichia coli BW25113 0.60 b2021 hisC histidinol-phosphate aminotransferase (NCBI) 0.22 b2253 arnB uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) low > 76
Escherichia coli ECOR27 0.60 NOLOHH_15825 hisC histidinol-phosphate transaminase 0.23 NOLOHH_14620 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 76
Escherichia coli ECRC100 0.59 OKFHMN_24510 hisC histidinol-phosphate transaminase 0.54 OKFHMN_24430 rfbE GDP-perosamine synthase RfbE/PerA low > 79
Escherichia coli ECRC101 0.59 MCAODC_20430 hisC histidinol-phosphate transaminase 0.54 MCAODC_20510 rfbE GDP-perosamine synthase RfbE/PerA
Escherichia coli ECRC99 0.59 KEDOAH_03640 hisC histidinol-phosphate transaminase 0.54 KEDOAH_03720 rfbE GDP-perosamine synthase RfbE/PerA
Escherichia coli ECRC102 0.59 NIAGMN_22455 hisC histidinol-phosphate transaminase 0.54 NIAGMN_22375 rfbE GDP-perosamine synthase RfbE/PerA
Escherichia coli ECRC98 0.59 JDDGAC_28620 hisC histidinol-phosphate transaminase 0.54 JDDGAC_28540 rfbE GDP-perosamine synthase RfbE/PerA low > 87
Escherichia fergusonii Becca 0.59 EFB2_01835 Histidinol-phosphate aminotransferase 0.23 EFB2_01603 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 86
Escherichia coli ECOR38 0.59 HEPCGN_03215 hisC histidinol-phosphate transaminase 0.24 HEPCGN_03130 vioA dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA
Escherichia coli BL21 0.59 ECD_01923 histidinol-phosphate aminotransferase 0.24 ECD_01942 VioA, involved in dTDP-N-acetylviosamine synthesis
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_01679 Histidinol-phosphate aminotransferase 0.22 OHPLBJKB_01458 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 74
Serratia liquefaciens MT49 0.59 IAI46_08205 histidinol-phosphate transaminase 0.25 IAI46_11015 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 87
Pantoea agglomerans CFBP13505 P0401 0.59 PagCFBP13505_RS01205 histidinol-phosphate transaminase 0.25 PagCFBP13505_RS12240 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 74
Escherichia coli Nissle 1917 0.59 ECOLIN_RS11950 histidinol-phosphate transaminase 0.22 ECOLIN_RS13125 UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Klebsiella michiganensis M5al 0.59 BWI76_RS18930 histidinol-phosphate transaminase 0.23 BWI76_RS26485 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 92
Pantoea sp. MT58 0.58 IAI47_07085 histidinol-phosphate transaminase 0.25 IAI47_21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 76
Erwinia amylovora T8 0.58 OLJFJH_12175 histidinol-phosphate transaminase 0.24 OLJFJH_17365 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 58
Klebsiella pneumoniae MKP103 0.58 KDGMDA_26100 histidinol-phosphate transaminase 0.24 KDGMDA_07345 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 95
Enterobacter sp. TBS_079 0.58 MPMX20_03003 Histidinol-phosphate aminotransferase 0.24 MPMX20_04380 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 85
Enterobacter asburiae PDN3 0.57 EX28DRAFT_0538 histidinol-phosphate aminotransferase 0.24 EX28DRAFT_4082 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis low > 76
Rahnella sp. WP5 0.57 EX31_RS11445 histidinol-phosphate transaminase 0.24 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF3911 Histidinol-phosphate aminotransferase (EC 2.6.1.9) 0.25 GFF1858 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) low > 78
Erwinia tracheiphila SCR3 0.57 LU632_RS08940 hisC histidinol-phosphate transaminase 0.24 LU632_RS16495 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 73
Erwinia tracheiphila HP pepo 2.2 0.57 IJEDHG_19085 hisC histidinol-phosphate transaminase 0.24 IJEDHG_02605 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 61
Alteromonas macleodii MIT1002 0.47 MIT1002_02634 Histidinol-phosphate aminotransferase 0.22 MIT1002_01078 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase low > 70
Shewanella sp. ANA-3 0.46 Shewana3_1852 histidinol phosphate aminotransferase (RefSeq) 0.23 Shewana3_1303 polysaccharide biosynthesis protein (RefSeq) low > 73
Shewanella loihica PV-4 0.42 Shew_2199 histidinol-phosphate aminotransferase (RefSeq) 0.20 Shew_1319 DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) low > 60
Rhodanobacter sp000427505 FW510-R12 0.38 LRK53_RS08465 histidinol-phosphate transaminase 0.17 LRK53_RS00475 DegT/DnrJ/EryC1/StrS family aminotransferase low > 59
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_04955 hisC histidinol-phosphate transaminase 0.23 OKGIIK_10755 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase low > 53
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.2947.1 Histidinol-phosphate aminotransferase (EC 2.6.1.9) 0.22 Xcc-8004.2801.1 Aminotransferase, DegT/DnrJ/EryC1/StrS family low > 74
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS01600 histidinol-phosphate transaminase 0.21 LRK54_RS05160 DegT/DnrJ/EryC1/StrS family aminotransferase low > 59
Rhodanobacter denitrificans MT42 0.35 LRK55_RS01380 histidinol-phosphate transaminase 0.21 LRK55_RS04940 DegT/DnrJ/EryC1/StrS family aminotransferase low > 63
Shewanella amazonensis SB2B 0.35 Sama_1943 histidinol-phosphate aminotransferase (RefSeq) 0.27 Sama_2329 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis (RefSeq) low > 62
Pontibacter actiniarum KMM 6156, DSM 19842 0.32 CA264_05035 histidinol-phosphate transaminase 0.30 CA264_12460 aminotransferase DegT low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_2458 histidinol-phosphate aminotransferase 0.24 Echvi_0062 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis low > 79
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS06725 histidinol-phosphate transaminase 0.18 ABZR86_RS18520 DegT/DnrJ/EryC1/StrS family aminotransferase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS06875 histidinol-phosphate transaminase 0.28 ABZR88_RS12735 DegT/DnrJ/EryC1/StrS aminotransferase family protein low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS03630 histidinol-phosphate transaminase 0.35 CA265_RS01760 aminotransferase DegT low > 88
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS02445 histidinol-phosphate transaminase 0.26 HMPREF1078_RS01585 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 61
Cellulophaga baltica 18 0.29 M666_RS17150 histidinol-phosphate transaminase 0.28 M666_RS12340 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 67
Bacteroides ovatus ATCC 8483 0.29 BACOVA_01233 histidinol-phosphate transaminase 0.20 BACOVA_03734 DegT/DnrJ/EryC1/StrS aminotransferase family protein low > 96
Bacteroides stercoris CC31F 0.29 HMPREF1181_RS04855 histidinol-phosphate transaminase 0.18 HMPREF1181_RS14960 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 56
Bacteroides thetaiotaomicron VPI-5482 0.27 BT0202 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.22 BT3376 nucleotide sugar transaminase (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.27 HMPREF1058_RS15880 histidinol-phosphate transaminase 0.20 HMPREF1058_RS03380 DegT/DnrJ/EryC1/StrS family aminotransferase low > 67
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS11840 histidinol-phosphate transaminase 0.27 ABI39_RS13755 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 72
Desulfovibrio vulgaris Hildenborough JW710 0.21 DVU1029 hisC histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.24 DVU3010 lpsC aminotransferase, DegT/DnrJ/EryC1/StrS family (TIGR) low > 55
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS20335 histidinol-phosphate aminotransferase 0.27 HSERO_RS21000 aminotransferase DegT low > 78
Variovorax sp. OAS795 0.19 ABID97_RS23145 histidinol-phosphate transaminase 0.24 ABID97_RS02145 DegT/DnrJ/EryC1/StrS family aminotransferase low > 91
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS27860 histidinol-phosphate transaminase 0.22 QEN71_RS29145 DegT/DnrJ/EryC1/StrS family aminotransferase low > 153
Methylophilus sp. DMC18 0.19 GFF666 Histidinol-phosphate aminotransferase 0.22 GFF528 dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose transaminase
Variovorax sp. SCN45 0.19 GFF5348 Histidinol-phosphate aminotransferase (EC 2.6.1.9) 0.22 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family low > 127
Desulfovibrio vulgaris Miyazaki F 0.19 DvMF_0908 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.21 DvMF_1891 Glutamine--scyllo-inositol transaminase (RefSeq) low > 51
Pseudomonas stutzeri RCH2 0.19 Psest_1985 histidinol-phosphate aminotransferase 0.22 Psest_1811 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF1313 Histidinol-phosphate aminotransferase (EC 2.6.1.9) 0.20 GFF1844 Aminotransferase low > 90
Paraburkholderia graminis OAS925 0.18 ABIE53_003700 histidinol-phosphate aminotransferase 0.22 ABIE53_000145 dTDP-4-amino-4,6-dideoxygalactose transaminase low > 113
Pseudomonas sp. DMC3 0.18 GFF4676 Histidinol-phosphate aminotransferase 0.21 GFF2433 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 89
Pseudomonas simiae WCS417 0.18 PS417_08130 aspartate aminotransferase 0.21 PS417_27245 aminotransferase DegT low > 88
Paraburkholderia bryophila 376MFSha3.1 0.18 H281DRAFT_05654 histidinol phosphate aminotransferase apoenzyme 0.22 H281DRAFT_00805 dTDP-4-amino-4,6-dideoxygalactose transaminase
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_2177 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) 0.37 PfGW456L13_4375 perosamine synthetase low > 87
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_2519 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) 0.23 Pf6N2E2_2610 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase low > 103
Burkholderia phytofirmans PsJN 0.18 BPHYT_RS14905 Aromatic-amino-acid transaminase (EC 2.6.1.57) (from data) 0.21 BPHYT_RS08930 aminotransferase DegT
Pseudomonas lactucae CFBP13502 0.18 GEMAOFIL_01762 Histidinol-phosphate aminotransferase 0.21 GEMAOFIL_05587 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 96
Pseudomonas orientalis W4I3 0.18 QF045_RS10850 histidinol-phosphate transaminase 0.21 QF045_RS01615 DegT/DnrJ/EryC1/StrS aminotransferase family protein low > 93
Pseudomonas fluorescens FW300-N2E3 0.18 AO353_02065 aspartate aminotransferase 0.25 AO353_25530 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase low > 101
Pseudomonas fluorescens FW300-N2C3 0.18 AO356_03460 aspartate aminotransferase 0.22 AO356_03965 aminotransferase low > 104
Azospirillum brasilense Sp245 0.17 AZOBR_RS20485 histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) 0.21 AZOBR_RS33605 erythromycin biosynthesis sensory transduction protein eryC1 low > 97
Rhodospirillum rubrum S1H 0.17 Rru_A3264 Histidinol-phosphate aminotransferase (NCBI) 0.21 Rru_A2746 DegT/DnrJ/EryC1/StrS aminotransferase (NCBI) low > 58
Marinobacter adhaerens HP15 0.17 HP15_1363 histidinol-phosphate aminotransferase 0.23 HP15_2398 aminotransferase, DegT/DnrJ/EryC1/StrS family
Dechlorosoma suillum PS 0.17 Dsui_1414 histidinol-phosphate aminotransferase 0.23 Dsui_1769 putative PLP-dependent enzyme possibly involved in cell wall biogenesis
Pseudomonas sp. RS175 0.17 PFR28_00908 Histidinol-phosphate aminotransferase 0.23 PFR28_00919 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase
Ralstonia solanacearum PSI07 0.17 RPSI07_RS19705 histidinol-phosphate transaminase 0.22 RPSI07_RS17515 DegT/DnrJ/EryC1/StrS aminotransferase family protein
Synechococcus elongatus PCC 7942 0.17 Synpcc7942_1030 hisC histidinol-phosphate aminotransferase 0.34 Synpcc7942_0056 rfbE perosamine synthetase
Ralstonia sp. UNC404CL21Col 0.17 ABZR87_RS03260 histidinol-phosphate transaminase 0.36 ABZR87_RS22110 DegT/DnrJ/EryC1/StrS family aminotransferase low > 80
Methanococcus maripaludis S2 0.17 MMP_RS06260 histidinol-phosphate transaminase 0.33 MMP_RS01880 DegT/DnrJ/EryC1/StrS family aminotransferase
Acinetobacter baumannii LAC-4 0.17 RR41_RS15800 histidinol-phosphate transaminase 0.24 RR41_RS18630 LegC family aminotransferase
Pseudomonas aeruginosa PUPa3 0.17 DQ20_RS34430 hisC;go_function=histidinol-phosphate histidinol-phosphate transaminase 0.25 DQ20_RS41895 arnB;go_function=transaminase UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 101
Castellaniella sp019104865 MT123 0.17 ABCV34_RS02645 histidinol-phosphate transaminase 0.22 ABCV34_RS12945 DegT/DnrJ/EryC1/StrS family aminotransferase
Pseudomonas fluorescens FW300-N1B4 0.17 Pf1N1B4_349 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) 0.22 Pf1N1B4_3586 DegT/DnrJ/EryC1/StrS aminotransferase low > 87
Pseudomonas aeruginosa PA14 0.17 IKLFDK_16085 histidinol-phosphate transaminase 0.25 IKLFDK_18130 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 98
Pseudomonas aeruginosa MRSN321 0.17 DY961_RS01115 hisC;go_function=histidinol-phosphate histidinol-phosphate transaminase 0.25 DY961_RS15250 arnB;go_function=transaminase UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 100
Cupriavidus basilensis FW507-4G11 0.17 RR42_RS18910 histidinol-phosphate aminotransferase 0.25 RR42_RS15735 pyridoxal phosphate-dependent aminotransferase
Caulobacter crescentus NA1000 Δfur 0.16 CCNA_01124 histidinol-phosphate aminotransferase 0.41 CCNA_01064 perosamine synthetase low > 67
Caulobacter crescentus NA1000 0.16 CCNA_01124 histidinol-phosphate aminotransferase 0.41 CCNA_01064 perosamine synthetase low > 66
Pseudomonas syringae pv. syringae B728a ΔmexB 0.16 Psyr_4132 histidinol phosphate aminotransferase apoenzyme 0.23 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.16 Psyr_4132 histidinol phosphate aminotransferase apoenzyme 0.23 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase low > 86
Pseudomonas sp. BP01 0.15 JOY50_RS11205 hisC histidinol-phosphate transaminase 0.22 JOY50_RS13135 DegT/DnrJ/EryC1/StrS aminotransferase family protein low > 84
Phaeobacter inhibens DSM 17395 0.15 PGA1_c25240 histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) 0.22 PGA1_c05070 putative pyridoxal-phosphate-dependent aminotransferase
Magnetospirillum magneticum AMB-1 0.15 AMB_RS20110 histidinol-phosphate aminotransferase 0.28 AMB_RS00275 DegT/DnrJ/EryC1/StrS family aminotransferase
Pseudomonas sp. SVBP6 0.15 COO64_RS04360 hisC histidinol-phosphate transaminase 0.22 COO64_RS21480 vioA dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA low > 93
Sphingomonas koreensis DSMZ 15582 0.14 Ga0059261_2299 histidinol-phosphate aminotransferase 0.20 Ga0059261_3110 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
Brevundimonas sp. GW460-12-10-14-LB2 0.13 A4249_RS11450 histidinol-phosphate transaminase 0.19 A4249_RS13795 DegT/DnrJ/EryC1/StrS aminotransferase family protein
Fusobacterium nucleatum SB010 0.11 HUW76_05250 threonine-phosphate decarboxylase 0.25 HUW76_01330 LegC family aminotransferase low > 35

Not shown: 24 genomes with orthologs for CSW01_05755 only; 2 genomes with orthologs for CSW01_01285 only