| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Klebsiella michiganensis M5al | 1.0 | BWI76_RS00865 | | DNA-binding transcriptional regulator OxyR | 1.0 | BWI76_RS08425 | | succinyl-CoA ligase subunit beta | 0.27 | 14 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.98 | GFF2347 | | Hydrogen peroxide-inducible genes activator | 0.95 | GFF4641 | | Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.96 | MPMX20_04519 | | Hydrogen peroxide-inducible genes activator | 0.98 | MPMX20_01356 | | Succinate--CoA ligase [ADP-forming] subunit beta | low | > 85 |
| Enterobacter asburiae PDN3 | 0.96 | EX28DRAFT_4424 | | Transcriptional regulator | 0.95 | EX28DRAFT_2264 | | succinyl-CoA synthetase, beta subunit | — | — |
| Escherichia coli ECRC102 | 0.96 | NIAGMN_11315 | oxyR | DNA-binding transcriptional regulator OxyR | 0.95 | NIAGMN_04965 | sucC | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Escherichia coli BL21 | 0.96 | ECD_03846 | | oxidative and nitrosative stress transcriptional regulator | 0.95 | ECD_00687 | | succinyl-CoA synthetase, beta subunit | low | > 61 |
| Escherichia coli ECRC98 | 0.96 | JDDGAC_17190 | oxyR | DNA-binding transcriptional regulator OxyR | 0.95 | JDDGAC_10570 | sucC | ADP-forming succinate--CoA ligase subunit beta | low | > 86 |
| Escherichia coli ECRC99 | 0.96 | KEDOAH_14595 | oxyR | DNA-binding transcriptional regulator OxyR | 0.95 | KEDOAH_21050 | sucC | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Escherichia coli Nissle 1917 | 0.96 | ECOLIN_RS22870 | | DNA-binding transcriptional regulator OxyR | 0.95 | ECOLIN_RS03880 | | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Escherichia coli ECRC62 | 0.96 | BNILDI_05825 | oxyR | DNA-binding transcriptional regulator OxyR | 0.95 | BNILDI_21300 | sucC | ADP-forming succinate--CoA ligase subunit beta | low | > 75 |
| Escherichia coli ECRC100 | 0.96 | OKFHMN_13565 | oxyR | DNA-binding transcriptional regulator OxyR | 0.95 | OKFHMN_06915 | sucC | ADP-forming succinate--CoA ligase subunit beta | low | > 80 |
| Escherichia coli ECOR38 | 0.96 | HEPCGN_12210 | oxyR | DNA-binding transcriptional regulator OxyR | 0.95 | HEPCGN_01315 | sucC | ADP-forming succinate--CoA ligase subunit beta | low | > 87 |
| Escherichia coli BW25113 | 0.96 | b3961 | oxyR | DNA-binding transcriptional dual regulator (NCBI) | 0.95 | b0728 | sucC | succinyl-CoA synthetase subunit beta (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.96 | NOLOHH_05700 | oxyR | DNA-binding transcriptional regulator OxyR | 0.95 | NOLOHH_23305 | sucC | ADP-forming succinate--CoA ligase subunit beta | low | > 75 |
| Escherichia coli ECRC101 | 0.96 | MCAODC_04065 | oxyR | DNA-binding transcriptional regulator OxyR | 0.95 | MCAODC_26135 | sucC | ADP-forming succinate--CoA ligase subunit beta | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.96 | OHPLBJKB_04089 | | Hydrogen peroxide-inducible genes activator | 0.95 | OHPLBJKB_02989 | | Succinate--CoA ligase [ADP-forming] subunit beta | low | > 73 |
| Escherichia fergusonii Becca | 0.96 | EFB2_04651 | | Hydrogen peroxide-inducible genes activator | 0.95 | EFB2_03378 | | Succinate--CoA ligase [ADP-forming] subunit beta | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.90 | HER17_RS00955 | | DNA-binding transcriptional regulator OxyR | 0.90 | HER17_RS14920 | | ADP-forming succinate--CoA ligase subunit beta | low | > 75 |
| Dickeya dianthicola ME23 | 0.89 | DZA65_RS21450 | | DNA-binding transcriptional regulator OxyR | 0.91 | DZA65_RS06855 | | ADP-forming succinate--CoA ligase subunit beta | low | > 75 |
| Dickeya dianthicola 67-19 | 0.89 | HGI48_RS20405 | | DNA-binding transcriptional regulator OxyR | 0.91 | HGI48_RS06510 | | ADP-forming succinate--CoA ligase subunit beta | low | > 71 |
| Dickeya dadantii 3937 | 0.89 | DDA3937_RS00970 | | DNA-binding transcriptional regulator OxyR | 0.91 | DDA3937_RS06470 | | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Serratia liquefaciens MT49 | 0.88 | IAI46_24475 | | DNA-binding transcriptional regulator OxyR | 0.91 | IAI46_06285 | | ADP-forming succinate--CoA ligase subunit beta | low | > 86 |
| Pantoea sp. MT58 | 0.88 | IAI47_00930 | | DNA-binding transcriptional regulator OxyR | 0.90 | IAI47_13735 | | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Rahnella sp. WP5 | 0.88 | EX31_RS14170 | | DNA-binding transcriptional regulator OxyR | 0.91 | EX31_RS23450 | | ADP-forming succinate--CoA ligase subunit beta | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.87 | LU632_RS19590 | oxyR | DNA-binding transcriptional regulator OxyR | 0.91 | LU632_RS16085 | sucC | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.63 | CSW01_13340 | | DNA-binding transcriptional regulator OxyR | 0.77 | CSW01_10420 | | succinyl-CoA ligase subunit beta | low | > 62 |
| Rhodanobacter denitrificans FW104-10B01 | 0.42 | LRK54_RS04765 | | LysR substrate-binding domain-containing protein | 0.58 | LRK54_RS04985 | | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Rhodanobacter denitrificans MT42 | 0.42 | LRK55_RS04545 | | LysR substrate-binding domain-containing protein | 0.58 | LRK55_RS04765 | | ADP-forming succinate--CoA ligase subunit beta | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.42 | OKGIIK_01995 | lysR | DNA-binding transcriptional regulator OxyR | 0.59 | OKGIIK_01760 | sucC | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.42 | Xcc-8004.4224.1 | | Hydrogen peroxide-inducible genes activator | 0.57 | Xcc-8004.1355.1 | | Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.41 | ABZR86_RS19355 | | DNA-binding transcriptional regulator OxyR | 0.58 | ABZR86_RS11025 | | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Lysobacter sp. OAE881 | 0.39 | ABIE51_RS05475 | | LysR substrate-binding domain-containing protein | 0.58 | ABIE51_RS04860 | | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Rhodospirillum rubrum S1H | 0.37 | Rru_A0334 | | Transcriptional Regulator, LysR family (NCBI) | 0.55 | Rru_A1211 | | Succinyl-CoA synthetase, beta subunit (NCBI) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.36 | Psyr_0202 | | transcriptional regulator, LysR family | 0.77 | Psyr_2012 | | succinyl-CoA synthetase (ADP-forming) beta subunit | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.36 | Psyr_0202 | | transcriptional regulator, LysR family | 0.77 | Psyr_2012 | | succinyl-CoA synthetase (ADP-forming) beta subunit | — | — |
| Pseudomonas stutzeri RCH2 | 0.36 | Psest_4191 | | Transcriptional regulator | 0.74 | Psest_2491 | | succinyl-CoA synthetase, beta subunit | low | > 67 |
| Pseudomonas putida KT2440 | 0.36 | PP_5309 | | oxidative and nitrosative stress transcriptional dual regulator | 0.75 | PP_4186 | | succinyl-CoA synthetase, beta subunit glutaryl-CoA synthetase, beta subunit | — | — |
| Herbaspirillum seropedicae SmR1 | 0.36 | HSERO_RS18935 | | LysR family transcriptional regulator | 0.48 | HSERO_RS03280 | | malate--CoA ligase subunit beta | — | — |
| Castellaniella sp019104865 MT123 | 0.36 | ABCV34_RS03575 | | LysR substrate-binding domain-containing protein | 0.48 | ABCV34_RS04435 | | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.36 | Pf6N2E2_4353 | | Hydrogen peroxide-inducible genes activator | 0.78 | Pf6N2E2_5858 | | Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) | — | — |
| Azospirillum brasilense Sp245 | 0.35 | AZOBR_RS31340 | | LysR family transcriptional regulator | 0.56 | AZOBR_RS14065 | | malate--CoA ligase subunit beta | low | > 97 |
| Azospirillum sp. SherDot2 | 0.35 | MPMX19_04930 | | Hydrogen peroxide-inducible genes activator | 0.57 | MPMX19_00106 | | Succinate--CoA ligase [ADP-forming] subunit beta | — | — |
| Pseudomonas sp. S08-1 | 0.35 | OH686_13510 | | Hydrogen peroxide-inducible genes activator | 0.78 | OH686_01955 | | Succinyl-CoA ligase [ADP-forming] beta chain | — | — |
| Pseudomonas simiae WCS417 | 0.35 | PS417_27865 | | LysR family transcriptional regulator | 0.78 | PS417_08910 | | succinyl-CoA synthetase subunit beta | — | — |
| Ralstonia sp. UNC404CL21Col | 0.35 | ABZR87_RS01255 | | LysR substrate-binding domain-containing protein | 0.48 | ABZR87_RS07980 | | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.35 | H281DRAFT_04673 | | transcriptional regulator, LysR family | 0.52 | H281DRAFT_04205 | | succinyl-CoA synthetase (ADP-forming) beta subunit | — | — |
| Kangiella aquimarina DSM 16071 | 0.35 | B158DRAFT_0567 | | Transcriptional regulator | 0.74 | B158DRAFT_1426 | | succinyl-CoA synthetase, beta subunit | — | — |
| Dechlorosoma suillum PS | 0.34 | Dsui_0823 | | transcriptional regulator | 0.46 | Dsui_1445 | | succinyl-CoA synthetase, beta subunit | low | > 51 |
| Cupriavidus basilensis FW507-4G11 | 0.34 | RR42_RS17385 | | LysR family transcriptional regulator | 0.55 | RR42_RS31375 | | succinyl-CoA synthetase subunit beta | low | > 128 |
| Ralstonia solanacearum UW163 | 0.34 | UW163_RS08020 | | hydrogen peroxide-inducible genes activator | 0.49 | UW163_RS01610 | | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.34 | AO356_12385 | | LysR family transcriptional regulator | 0.78 | AO356_19710 | | succinyl-CoA synthetase subunit beta | — | — |
| Pseudomonas fluorescens SBW25 | 0.34 | PFLU_RS29545 | | hydrogen peroxide-inducible genes activator | 0.78 | PFLU_RS08970 | | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.34 | PFLU_RS29545 | | hydrogen peroxide-inducible genes activator | 0.78 | PFLU_RS08970 | | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.34 | RALBFv3_RS05605 | | hydrogen peroxide-inducible genes activator | 0.49 | RALBFv3_RS12025 | | ADP-forming succinate--CoA ligase subunit beta | low | > 76 |
| Burkholderia phytofirmans PsJN | 0.34 | BPHYT_RS03470 | | LysR family transcriptional regulator | 0.51 | BPHYT_RS16345 | | succinyl-CoA ligase [ADP-forming] subunit beta | low | > 109 |
| Ralstonia solanacearum PSI07 | 0.34 | RPSI07_RS11690 | | hydrogen peroxide-inducible genes activator | 0.48 | RPSI07_RS21245 | | ADP-forming succinate--CoA ligase subunit beta | low | > 81 |
| Pseudomonas fluorescens GW456-L13 | 0.34 | PfGW456L13_773 | | Hydrogen peroxide-inducible genes activator | 0.78 | PfGW456L13_4266 | | Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) | — | — |
| Pseudomonas sp. RS175 | 0.34 | PFR28_04434 | | Hydrogen peroxide-inducible genes activator | 0.78 | PFR28_03093 | | Succinate--CoA ligase [ADP-forming] subunit beta | — | — |
| Ralstonia solanacearum GMI1000 | 0.34 | RS_RS13470 | | hydrogen peroxide-inducible genes activator | 0.48 | RS_RS02775 | | succinyl-CoA ligase subunit beta | low | > 80 |
| Paraburkholderia sabiae LMG 24235 | 0.34 | QEN71_RS26625 | | LysR substrate-binding domain-containing protein | 0.54 | QEN71_RS20405 | | ADP-forming succinate--CoA ligase subunit beta | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.34 | ABIE53_000834 | | LysR family hydrogen peroxide-inducible transcriptional activator | 0.50 | ABIE53_003445 | | succinyl-CoA synthetase beta subunit | low | > 113 |
| Rhodopseudomonas palustris CGA009 | 0.34 | TX73_002235 | | LysR substrate-binding domain-containing protein | 0.55 | TX73_000990 | | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.34 | Pf1N1B4_2106 | | Hydrogen peroxide-inducible genes activator | 0.78 | Pf1N1B4_3684 | | Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) | low | > 87 |
| Sinorhizobium meliloti 1021 | 0.34 | SMc00818 | | hydrogen peroxide-inducible genes activator (morphology and AUTO-aggregation control protein) | 0.51 | SMc02480 | | succinyl-CoA synthetase subunit beta | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.34 | AO353_09315 | | LysR family transcriptional regulator | 0.78 | AO353_01820 | | succinyl-CoA synthetase subunit beta | — | — |
| Marinobacter adhaerens HP15 | 0.33 | HP15_308 | | oxidative stress regulatory protein OxyR | 0.75 | HP15_1524 | | succinyl-CoA synthetase, beta subunit | — | — |
| Agrobacterium fabrum C58 | 0.33 | Atu4641 | | LysR family transcriptional regulator | 0.49 | Atu2638 | | succinyl-CoA synthetase beta chain | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.32 | BT4716 | | redox-sensitive transcriptional activator (NCBI ptt file) | 0.43 | BT0788 | | succinyl-CoA synthetase beta chain (NCBI ptt file) | low | > 81 |
| Acidovorax sp. GW101-3H11 | 0.32 | Ac3H11_784 | | Hydrogen peroxide-inducible genes activator | 0.50 | Ac3H11_1252 | | Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) | — | — |
| Bacteroides ovatus ATCC 8483 | 0.31 | BACOVA_05567 | | LysR substrate binding domain protein | 0.42 | BACOVA_02527 | | succinate-CoA ligase, beta subunit | low | > 94 |
| Caulobacter crescentus NA1000 Δfur | 0.31 | CCNA_03811 | | LysR-family transcriptional regulator | 0.57 | CCNA_00340 | | succinyl-CoA synthetase beta chain | — | — |
| Caulobacter crescentus NA1000 | 0.31 | CCNA_03811 | | LysR-family transcriptional regulator | 0.57 | CCNA_00340 | | succinyl-CoA synthetase beta chain | — | — |
| Phaeobacter inhibens DSM 17395 | 0.30 | PGA1_78p00040 | | hydrogen peroxide-inducible genes activator OxyR | 0.56 | PGA1_c03630 | | succinyl-CoA ligase [ADP-forming] subunit beta | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.30 | Ga0059261_0159 | | Transcriptional regulator | 0.54 | Ga0059261_2278 | | succinyl-CoA synthetase, beta subunit | — | — |
| Magnetospirillum magneticum AMB-1 | 0.30 | AMB_RS03045 | | hydrogen peroxide-inducible genes activator | 0.56 | AMB_RS20030 | | succinyl-CoA ligase subunit beta | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.30 | GFF2803 | | Hydrogen peroxide-inducible genes activator | 0.49 | GFF2504 | | Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) | — | — |
| Rhizobium sp. OAE497 | 0.29 | ABIE40_RS29270 | | LysR substrate-binding domain-containing protein | 0.49 | ABIE40_RS17995 | | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.29 | Echvi_1045 | | Transcriptional regulator | 0.44 | Echvi_2908 | | succinyl-CoA synthetase, beta subunit | low | > 79 |
| Bosea sp. OAE506 | 0.29 | ABIE41_RS01195 | | hydrogen peroxide-inducible genes activator | 0.52 | ABIE41_RS08965 | | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.29 | CA264_13765 | | DNA-binding transcriptional regulator OxyR | 0.45 | CA264_10470 | | succinate--CoA ligase subunit beta | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.29 | ABZR88_RS18535 | | hydrogen peroxide-inducible genes activator | 0.44 | ABZR88_RS07630 | | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Dinoroseobacter shibae DFL-12 | 0.29 | Dshi_0727 | | transcriptional regulator, LysR family (RefSeq) | 0.57 | Dshi_2878 | | succinyl-CoA synthetase, beta subunit (RefSeq) | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.28 | CA265_RS19680 | | DNA-binding transcriptional regulator OxyR | 0.44 | CA265_RS04300 | | succinate--CoA ligase subunit beta | — | — |
| Acinetobacter radioresistens SK82 | 0.28 | MPMX26_02334 | | Hydrogen peroxide-inducible genes activator | 0.65 | MPMX26_00754 | | Succinate--CoA ligase [ADP-forming] subunit beta | low | > 36 |
| Alteromonas macleodii MIT1002 | 0.27 | MIT1002_01120 | | Morphology and auto-aggregation control protein | 0.75 | MIT1002_01950 | | Succinyl-CoA ligase [ADP-forming] subunit beta | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.26 | A4249_RS12755 | | hydrogen peroxide-inducible genes activator | 0.49 | A4249_RS14420 | | ADP-forming succinate--CoA ligase subunit beta | — | — |
| Shewanella oneidensis MR-1 | 0.26 | SO1328 | | transcriptional regulator, LysR family (NCBI ptt file) | 0.75 | SO1932 | sucC | succinyl-CoA synthase, beta subunit (NCBI ptt file) | — | — |
| Shewanella sp. ANA-3 | 0.26 | Shewana3_3046 | | LysR family transcriptional regulator (RefSeq) | 0.75 | Shewana3_1712 | sucC | succinyl-CoA synthetase subunit beta (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.25 | Shew_1035 | | LysR family transcriptional regulator (RefSeq) | 0.74 | Shew_1657 | sucC | succinyl-CoA synthetase subunit beta (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.24 | Sama_0860 | | LysR family transcriptional regulator (RefSeq) | 0.77 | Sama_1429 | sucC | succinyl-CoA synthetase subunit beta (RefSeq) | — | — |
Not shown: 3 genomes with orthologs for BWI76_RS00865 only; 6 genomes with orthologs for BWI76_RS08425 only